Short-term seasonal changes in parasite community structure in northern leopard froglets (Rana pipiens) inhabiting agricultural wetlands

Parasite community structure can change seasonally with shifts in host habitat and in diet. However, anthropogenic activity may influence the natural changes in transmission dynamics of different parasite species. Effects of seasonal and agricultural activity on the parasite communities of newly metamorphosed northern leopard frogs (Rana pipiens) were investigated in July and September 2001 in 5 wetlands, 3 of which were exposed to pesticide runoff from surrounding agriculture. Nineteen parasite taxa were found. Component community richness was consistently high at the pristine reference wetland, whereas the communities at a managed reference wetland remained depauperate. Infracommunity richness increased throughout the season, but more so in frogs resident in agricultural wetlands. Digeneans using frogs as intermediate hosts dominated the communities, although many species were much lower in abundance in September, suggesting mortality of heavily infected frogs. Mean abundance of Haematoloechus spp. was positively related to that of odonate naiads in the frog diet, which appeared to reflect differential second intermediate host availability between reference and agricultural wetlands. Although virtually absent from wetlands in July just after frog metamorphosis, monoxenous nematodes were more prevalent and abundant at agricultural wetlands as the season progressed. Our results suggest that agricultural activity may further facilitate the transmission of monoxenous nematodes as frogs become more terrestrial.     

Enzymatic preparation of biosurfactants from sugars or sugar alcohols and fatty acids in organic media under reduced pressure

Biosurfactants were prepared by enzymatic esterification of sugars and sugar alcohols in nonaqueous media. Sorbitol monooleate was produced in pure molten substrates, with reduced pressure to remove water. The results were compared to synthesis in organic solvent, with and without water removal. Synthesis in organic solvent with water removal, obtained by refluxing through a desiccant under reduced pressure, proved to be the most efficient method in terms of total yield and side-products formation. This process was applied to the production of different surfactants, by changing the nature of the hydrophilic and hydrophobic moieties. Yields above 90% of monoesters were obtained after 24 h when the reaction was carried out in 2-methyl-2-butanol with Novozym 435 (Type B lipase from Candida antarctica) with an excess of hydroxyl donor. (c) 1995 John Wiley & Sons, Inc.     

Interaction of angiotensin I-converting enzyme with two potent tricyclic inhibitors

Inhibition of rabbit lung angiotensin I-converting enzyme was studied with two inhibitors that combined tricyclic mimics of a substrate C-terminal dipeptide recognition unit with a 4-phenylbutanoic acid fragment. The overall inhibition constant for [4S-[4 alpha, 7 alpha(R*),12b beta]]-7-[S-(1-carboxy-3-phenylpropyl) amino]-1,2,3,4,6,7,8,12b-octahydro-6-oxopyrido[2,1-a] [2] benzazepine-4-carboxylic acid (MDL 27,088) was approximately 4 pM, whereas that for [4R-[4 alpha, 7 alpha(S*), 12b beta]]-7-[S-(1-carboxy-3-phenylpropyl)amino]-3,4,6,7,8, 12b-hexahydro-6-oxo-1H-[1,4]thiazino[3,4-a] [2]benzazepine-4-carboxylic acid (MDL 27,788) was estimated to be 46 pM. The formation of an initial complex of target enzyme and MDL 27,088 and its slower isomerization to a second complex were characterized kinetically. Both compounds appear to be among the most potent inhibitors known for this enzyme.     

Regulatory proteins (inhibitors or activators) affect estimates of Mr of enzymes and receptors by radiation inactivation. A theoretical model.

The radiation-inactivation method allows the determination of the Mr of enzymes and receptors by monitoring the decay of biological activity as a function of absorbed dose. The presence of regulatory or effector proteins (inhibitors or activators) associated with an enzyme or receptor, or released in the preparation after tissue homogenization, may affect the decay of biological activity. How the activity is affected, however, will depend on the type of inhibition (competitive or non-competitive), the inhibitor or activator concentration, the dissociation constant of the enzyme-effector system, and the effector Mr relative to that of the enzyme. Since little is known on how effector proteins influence radiation inactivation of enzymes and receptors, we have considered a theoretical model in an effort to provide a framework for the interpretation of experimentally obtained data. Our model predicts that competitive and non-competitive inhibitors of enzymes could be distinguished by analysing irradiated samples with various substrate concentrations. Inhibitors will decrease whereas activators will increase the apparent target size of enzymes or receptors.     

In Planta Mutagenesis Determines the Functional Regions of the Wheat Puroindoline Proteins

In planta analysis of protein function in a crop plant could lead to improvements in understanding protein structure/function relationships as well as selective agronomic or end product quality improvements. The requirements for successful in planta analysis are a high mutation rate, an efficient screening method, and a trait with high heritability. Two ideal targets for functional analysis are the Puroindoline a and Puroindoline b (Pina and Pinb, respectively) genes, which together compose the wheat (Triticum aestivum L.) Ha locus that controls grain texture and many wheat end-use properties. Puroindolines (PINs) together impart soft texture, and mutations in either PIN result in hard seed texture. Studies of the PINs'' mode of action are limited by low allelic variation. To create new Pin alleles and identify critical function-determining regions, Pin point mutations were created in planta via EMS treatment of a soft wheat. Grain hardness of 46 unique PIN missense alleles was then measured using segregating F₂:F₃ populations. The impact of individual missense alleles upon PIN function, as measured by grain hardness, ranged from neutral (74%) to intermediate to function abolishing. The percentage of function-abolishing mutations among mutations occurring in both PINA and PINB was higher for PINB, indicating that PINB is more critical to overall Ha function. This is contrary to expectations in that PINB is not as well conserved as PINA. All function-abolishing mutations resulted from structure-disrupting mutations or from missense mutations occurring near the Tryptophan-rich region. This study demonstrates the feasibility of in planta functional analysis of wheat proteins and that the Tryptophan-rich region is the most important region of both PINA and PINB.NATURAL selection has captured a relatively small subset of potentially useful protein sequences. Unraveling the critical features of proteins via understanding the process of their evolution is a powerful approach for proteins present in many diverse species (Bashford et al. 1987; Hampsey et al. 1988). However, this approach is not feasible for the wheat puroindolines (PINs) that are present only in hexaploid wheat and related species (Massa and Morris 2006). The PINs are unique in structure in having a tryptophan-rich domain and are members of the protease inhibitor/seed storage/lipid transfer protein family (PF00234) (Finn et al. 2008).The tryptophan-rich domain has been hypothesized to control PIN function (Giroux and Morris 1997), but there is no unbiased direct evidence for this since previous studies have focused on the tryptophan box alone (Evrard et al. 2008). A nonbiased approach would consist of random mutagenesis followed by functional analysis (Bowie et al. 1990). This approach has been used extensively for proteins that can be expressed in vitro using either random (Tarun et al. 1998; Guo et al. 2004; Smith and Raines 2006; Georgelis et al. 2007) or site-directed mutations (Miyahara et al. 2008; Osmani et al. 2008). However, functional analysis of many plant proteins in vitro may not be comparable to in planta analysis. In the case of puroindolines, there is no in vitro assay that properly mimics the synergistic binding of PINA and PINB to starch granules or is as easy to measure as grain hardness. Therefore, creation and analysis of a large number of new alleles in wheat in planta is an ideal approach to dissect PIN function.The absence of high-throughput transformation and/or functional screening methods in most crop plants is the largest obstacle in the way of in planta protein functional analysis. However, high-throughput in vitro random or targeted mutagenesis followed by functional analysis has been demonstrated in Arabidopsis thaliana (Dunning et al. 2007) and Nicotiana benthamiana (Boter et al. 2007). Traditional in planta mutagenesis followed by analysis of loss-of-function mutations has been used to clone unknown genes (Xiong et al. 2001) or to define function for candidate genes (Haralampidis et al. 2001; Qi et al. 2006). A high-throughput in planta functional approach for PINA and PINB seems attractive for three reasons. First, the EMS mutation rate in wheat is higher than in any other plant (Slade et al. 2005; Feiz et al. 2009a). Second, PINs control the vast majority of variation in grain hardness (Campbell et al. 1999). Finally, a small-scale preliminary study indicated the feasibility of this approach (Feiz et al. 2009a).PINA and PINB are cysteine-rich proteins unique in having a tryptophan-rich domain (Blochet et al. 1993) and together compose the wheat Hardness (Ha) locus (Giroux and Morris 1998; Wanjugi et al. 2007a). Ha is located on chromosome 5DS and is the major determinant of wheat endosperm texture (Mattern et al. 1973; Law et al. 1978; Campbell et al. 1999). Soft texture (Ha) results when both Pin genes are wild type (Pina-D1a, Pinb-D1a) while hard texture (ha) results from mutations in either Pin (Giroux and Morris 1997, 1998). Transgenic studies in rice (Krishnamurthy and Giroux 2001), wheat (Beecher et al. 2002; Martin et al. 2006), and corn (Zhang et al. 2009) have demonstrated that Pin mutations are causative to hard grain texture. PINA and PINB are not functionally interchangeable and control grain hardness via cooperative binding to starch granules (Hogg et al. 2004; Swan et al. 2006; Wanjugi et al. 2007a; Feiz et al. 2009b). PIN binding to starch granules is mediated by polar lipids (Greenblatt et al. 1995) and PIN abundance is correlated with seed polar lipid content (Feiz et al. 2009b). Variation in PIN function affects grain hardness along with nearly all end product quality traits (Hogg et al. 2005; Martin et al. 2007, 2008; Wanjugi et al. 2007b; Feiz et al. 2008). Determining PINs'' function-determining regions could lead to greater knowledge of their mode of action and to wheat quality improvements. Current PIN functional analyses have been limited to in vitro tests of binding to each other (Ziemann et al. 2008) or to yeast membranes (Evrard et al. 2008).Here, we report the creation and functional analysis in planta of new alleles of PINA and PINB. This is the first successful in planta functional analysis of a crop plant protein.     

Influence of calcium ions in the flow cytometric analysis of human CD8-positive cells.

BACKGROUND: The CD8 co-receptor is an important marker used to identify various lymphocyte subsets. A significant decrease in CD8alpha staining intensity was observed in the presence of divalent cation chelators. METHODS: Peripheral blood mononuclear cells (PBMC) obtained from healthy volunteers were treated with calcium chelators, stained with different anti-human CD8 mAbs, and analyzed by flow cytometry. RESULTS: Calcium chelators caused a dose-dependent decrease in fluorescence intensity, using specific anti-human CD8alpha mAbs. This phenomenon was not due to CD8 internalization and could be reversed by the addition of calcium ions. In contrast, calcium depletion increased staining intensity with one anti-CD8beta mAb. CONCLUSIONS: Divalent cation chelators are used as cell anti-clumping agents in MACS or FACS applications. Researchers should be aware that such treatment could lead to the almost complete loss of fluorescence with selected anti-human CD8alpha mAbs. Since CD8 staining is used in conjunction with tetramer staining to identify antigen-specific cytotoxic human T cells, the effect of calcium depletion should be taken into account in experimental design.     

A New Way of Assessing Foraging Behaviour at the Individual Level Using Faeces Marking and Satellite Telemetry

Heterogeneity in foraging behaviour can profoundly influence ecological processes shaping populations. To scale-up from individual foraging behaviour to processes occurring at the population scale, one needs to sample foraging behaviour at the individual level, and over large temporal scales or during critical seasons known to influence life-history traits. We developed an innovative technique to monitor foraging behaviour at the individual level in secretive species, a technique that can be ultimately used to investigate the links between foraging behaviour and life-history traits. First, the technique used a novel approach, namely the combination of telemetry tracking and biomarking of faeces with food dyes to locate fresh signs of presence left by individuals equipped with GPS collars. Second, the technique is based on the simultaneous or successive sampling of life-history traits and individual foraging behaviour, using tracks with high probabilities of recovery of dyed faeces. We first describe our methodological approach, using a case study of a large herbivore, and then provide recommendations and guidelines for its use. Sampling single snow tracks of individuals equipped with a GPS collar was a reliable way to assess individual winter foraging behaviour in a white-tailed deer (Odocoileus virginianus Zimmermann) population. During that period, the probability of recovery of dyed faeces within the range of the collar precision was very high for single snow tracks of equipped deer (97%). Our approach is well suited to study individual foraging behaviour, and could ultimately be used to investigate the interplay between intra-population heterogeneity in foraging behaviour, life-history traits, and demographic processes.