Interactions between European rabbits and native marsupials in the absence of terrestrial predators

European rabbits (Oryctolagus cuniculus) are ubiquitous across Australia and have the ability to influence native species directly and indirectly. Despite this, limited research focuses on interspecific interactions between rabbits and native mammals. We aimed to determine how site occupancy, detection probability, and temporal activity periods of native mammals changed in response to the presence or absence of rabbits. We monitored three native mammal species using 85 camera traps in a systematic grid at Mt Rothwell Conservation and Research Reserve (Victoria, Australia), a predator-barrier fenced reserve with two distinct sections—an area with rabbits and an area without. Bettongs (rufous Aepyprymnus rufescens and eastern Bettongia gaimardi), eastern barred bandicoots (Perameles gunni), and southern brown bandicoots (Isoodon obesulus) had a naïve site occupancy of 71%, 42%, and 24%, respectively. Site occupancy for both bandicoot species decreased in areas with more clumping grass with eastern barred bandicoot occupancy increasing with leaf litter cover, and southern brown bandicoots with vegetation height. Rabbit presence did not influence site occupancy of any species. Species detection probabilities were generally positively associated with open vegetation and rabbit presence, except for southern brown bandicoots which were more detectable without rabbits. Both bandicoot species shifted their peak activity periods in the absence of rabbits having an earlier, and more defined activity peak. Our results demonstrate that the presence of rabbits in the absence of invasive predators may not influence the site occupancy of co-occurring native mammals, however, could influence the behaviour of smaller co-occurring mammals, either directly or indirectly.     

In situ river experiments to explore variability in Microcoleus autumnalis mat expansion

Hydrobiologia - Proliferations of benthic mats dominated by anatoxin-producing Microcoleus autumnalis (basionym Phormidium autumnale) pose an increasing health risk to human and animals worldwide....     

Inactivation of the Heme Degrading Enzyme IsdI by an Active Site Substitution That Diminishes Heme Ruffling

IsdG and IsdI are paralogous heme degrading enzymes from the bacterium Staphylococcus aureus. Heme bound by these enzymes is extensively ruffled such that the meso-carbons at the sites of oxidation are distorted toward bound oxygen. In contrast, the canonical heme oxygenase family degrades heme that is bound with minimal distortion. Trp-66 is a conserved heme pocket residue in IsdI implicated in heme ruffling. IsdI variants with Trp-66 replaced with residues having less bulky aromatic and alkyl side chains were characterized with respect to catalytic activity, heme ruffling, and electrochemical properties. The heme degradation activity of the W66Y and W66F variants was approximately half that of the wild-type enzyme, whereas the W66L and W66A variants were inactive. A crystal structure and NMR spectroscopic analysis of the W66Y variant reveals that heme binds to this enzyme with less heme ruffling than observed for wild-type IsdI. The reduction potential of this variant (−96 ± 7 mV versus standard hydrogen electrode) is similar to that of wild-type IsdI (−89 ± 7 mV), so we attribute the diminished activity of this variant to the diminished heme ruffling observed for heme bound to this enzyme and conclude that Trp-66 is required for optimal catalytic activity.     

Extensions of the probabilistic ranking metrics of competing treatments in network meta-analysis to reflect clinically important relative differences on many outcomes

One of the key features of network meta-analysis is ranking of interventions according to outcomes of interest. Ranking metrics are prone to misinterpretation because of two limitations associated with the current ranking methods. First, differences in relative treatment effects might not be clinically important and this is not reflected in the ranking metrics. Second, there are no established methods to include several health outcomes in the ranking assessments. To address these two issues, we extended the P-score method to allow for multiple outcomes and modified it to measure the mean extent of certainty that a treatment is better than the competing treatments by a certain amount, for example, the minimum clinical important difference. We suggest to present the tradeoff between beneficial and harmful outcomes allowing stakeholders to consider how much adverse effect they are willing to tolerate for specific gains in efficacy. We used a published network of 212 trials comparing 15 antipsychotics and placebo using a random effects network meta-analysis model, focusing on three outcomes; reduction in symptoms of schizophrenia in a standardized scale, all-cause discontinuation, and weight gain.     

Pathogenicity of clinical Salmonella enterica serovar Typhimurium isolates from Thailand in a mouse colitis model

Salmonella enterica serovar Typhimurium (S. Typhimurium [STM]) is a leading cause of nontyphoidal salmonellosis (NTS) worldwide. The pathogenesis of NTS has been studied extensively using a streptomycin-pretreated mouse colitis model with the limited numbers of laboratory STM strains. However, the pathogenicity of the clinically isolated STM (STMC) strains endemic in Thailand in mice has not been explored. The aim of this study was to compare the pathogenicity of STMC strains collected from Northern Thailand with the laboratory STM (IR715) in mice. Five STMC isolates were obtained from the stool cultures of patients with acute NTS admitted to Maharaj Nakorn Chiang Mai Hospital in 2016 and 2017. Detection of virulence genes and sequence type (ST) of the strains was performed. Female C57BL/6 mice were pretreated with streptomycin sulfate 1 day prior to oral infection with STM. On Day 4 postinfection, mice were euthanized, and tissues were collected to analyze the bacterial numbers, tissue inflammation, and cecal histopathological score. We found that all five STMC strains are ST34 and conferred the same or reduced pathogenicity compared with that of IR715 in mice. A strain-specific effect of ST34 on mouse gut colonization was also observed. Thailand STM ST34 exhibited a significant attenuated systemic infection in mice possibly due to the lack of spvABC-containing virulence plasmid.     

Modéliser les interactions moléculaires par la théorie des réseaux de jeux

We present a method to model biological systems, the theory of games networks. It extends game theory by multiplying the number of games, and by allowing agents to play several games simultaneously. Some important notions of biological systems, such as locality of interactions and modularity, can then be modelled. To cite this article: M. Manceny et al., C. R. Biologies 329 (2006).