Transient metabolic modeling of Escherichia coli MG1655 and MG1655 ΔackA-pta, ΔpoxB Δpppc ppc-p37 for recombinant β-galactosidase production

Escherichia coli is one of the most widely used hosts for the production of recombinant proteins, among other reasons because its genetics are far better characterized than those of any other microorganism. To improve the understanding of recombinant protein synthesis in E. coli, the production of a model recombinant protein, β-galactosidase, was studied in response to the constitutive overexpression of the anaplerotic reaction afforded by PEP carboxylase. To this end, an IPTG wash-in experiment was performed starting from a well-defined steady-state condition for both the wild-type E. coli and a mutant with a defective acetate pathway and a constitutively overexpressed ppc. In order to compare the dynamics of the fluxes over time during the wash-in experiment, a method referred to as transient metabolic flux analysis, which is based on steady-state metabolic flux analysis, was used. This allowed us to track the intracellular changes/fluxes in both strains. It was observed that the flux towards fermentation products was 3.6 times lower in the ppc overexpression mutant compared to the wild-type E. coli. In the former on the other hand, the PPC flux is in general higher. In addition, the flux towards β-galactosidase was higher (12.4 times), resulting in five times more protein activity. These results indicate that by constitutively overexpressing the anaplerotic ppc gene in E. coli, the TCA cycle intermediates are increasingly replenished. The additional supply of these protein precursors has a positive result on recombinant protein production.     

Virtual reconstitution and new palaeopathological study of the Magdalenian child's skull of Rochereil

A fragmented skull of a child aged between two and four years was discovered within a Magdalenian level (11255 ± 50 BP, OxA-16932) in the cave of Rochereil in the Dordogne département, France. The presence of a lacuna in the frontal bone and the general appearance of the skull had led to the conclusion of a postmortem trepanation of one hydrocephalous child. Examination of the tables and of the diploe and, by means of electron microscopy, of the edges shows that the frontal lacuna is a pathological lesion and not a trepanation. Several dysmorphic and dysplasic lesions of deciduous teeth are associated. The virtual three-dimensional reconstruction of the cerebral skull rules out the previous diagnosis of hydrocephaly. The only tenable diagnosis is macrocrania. Numerous aetiologies can be cautiously evoked for the large cranial lacuna and the associated dysmorphic lesions, but no conclusive diagnosis can be put forward for this insulated skull.

Résumé

Le crâne très fragmenté d’un enfant âgé de deux à quatre ans avait été découvert dans un niveau magdalénien (11255 ± 50 BP, OxA-16932) dans la grotte de Rochereil, Dordogne, France. L’existence d’une lacune du frontal et l’aspect général du crâne avait fait conclure à un cas de trépanation post mortem d’un enfant hydrocéphale. L’examen des tables osseuses, de la diploe et de ses berges prouve que cette lacune du frontal est une lésion pathologique et ne résulte pas d’une trépanation. Des lésions dystrophiques et dysplasiques des dents déciduales sont associées. La reconstitution virtuelle du crâne cérébral montre que le diagnostic précédent d‘hydrocéphalie ne peut être retenu ; tout au plus s’agit-t-il d’une macrocrânie. Plusieurs étiologies peuvent être prudemment discutées pour cette large lacune frontale associée à des lésions dentaires et à une possible macrocrânie, mais sans qu’aucun diagnostic de certitude puisse être avancé.     

Crosstalk between xenobiotics metabolism and circadian clock

Many aspects of physiology and behavior in organisms from bacteria to man are subjected to circadian regulation. Indeed, the major function of the circadian clock consists in the adaptation of physiology to daily environmental change and the accompanying stresses such as exposition to UV-light and food-contained toxic compounds. In this way, most aspects of xenobiotic detoxification are subjected to circadian regulation. These phenomena are now considered as the molecular basis for the time-dependence of drug toxicities and efficacy. However, there is now evidences that these toxic compounds can, in turn, regulate circadian gene expression and thus influence circadian rhythms. As food seems to be the major regulator of peripheral clock, the possibility that food-contained toxic compounds participate in the entrainment of the clock will be discussed.     

Controlled pilot development unit-scale fed-batch cultivation of yeast on spruce hydrolysates

Yeast production on hydrolysate is a likely process solution in large-scale ethanol production from lignocellulose. The hydrolysate will be available on site, and the yeast has furthermore been shown to acquire an increased inhibitor tolerance when cultivated on hydrolysate. However, due to over-flow metabolism and inhibition, efficient yeast production on hydrolysate can only be achieved by well-controlled substrate addition. In the present work, a method was developed for controlled addition of hydrolysate to PDU (process development unit)-scale aerobic fed-batch cultivations of Saccharomyces cerevisiae TMB 3000. A feed rate control strategy, which maintains the ethanol concentration at a low constant level, was adapted to process-like conditions. The ethanol concentration was obtained from on-line measurements of the ethanol mole fraction in the exhaust gas. A computer model of the system was developed to optimize control performance. Productivities, biomass yields, and byproduct formation were evaluated. The feed rate control worked satisfactorily and maintained the ethanol concentration close to the setpoint during the cultivations. Biomass yields of 0.45 g/g were obtained on added hexoses during cultivation on hydrolysate and of 0.49 g/g during cultivation on a synthetic medium with glucose as the carbon source. Exponential growth was achieved with a specific growth rate of 0.18 h-1 during cultivation on hydrolysate and 0.22 h-1 during cultivation on glucose.     

Changes in apoplastic and intracellular leaf sugars induced by the blocking of export in Vicia faba

Sugar export by broadbean ( Vicia faba L. cv. Aguadulce) was blocked by a cold jacket (1 cm-width, 1°C) applied on the petiole of a mature leaf or by heat-girdling the petiole. A time course study was made on the effects of these treatments on apoplastic and intracellular soluble sugars of the leaf in relation to phloem loading and photosynthesis. Blocking of export by heat-girdling induced an inhibition of phloem loading within 10 min, an accumulation of starch within 30 min and a rise in apoplastic sucrose within 60 min. By contrast, apoplastic hexoses and photosynthesis were not affected by this treatment within 8 h and intracellular sugars were not affected within 2 h. The cold jacket also increased the sucrose content of the apoplast. The increase in apoplastic sucrose induced by the cold barrier is reversed upon rewarming and less marked when the sink/source ratio is increased by defoliating all but the leaves studied. The results are discussed in terms of sink/source relationships. They show that the increase in apoplastic sucrose resulting from inhibition of loading is not part of the events leading from blocking of transport to change in carbon partitioning.     

Recombinant interleukin-2 (rIL-2) after autologous bone marrow transplantation (BMT): a pilot study in 19 patients.

In vivo use of rIL-2 autologous BMT may be the means of reproducing a kind of "adoptive immunotherapy" from grafted cells after allogeneic BMT. This approach may enhance the spontaneous generation of cytotoxic T-cells and NK cells which are presumably involved in this immunotherapy. Potential risks of such an approach would be to increase the usual toxicity of rIL-2 and to jeopardize the hemopoietic reconstitution. To determine the feasibility of this approach we have treated 19 poor prognosis patients with a succession of autologous BMT followed 78 +/- 12 days later by a continuous infusion of rIL-2. Eighteen million international units (IU) per m2 per day of Proleukine (CETUS, Amsterdam, The Netherlands) were administrated over 6 or 12 days. No patient died of the procedure. Clinical toxicity related to rIL-2 was not increased. Hemopoietic toxicity, significant both for platelets and granulocytes, was transient. Immune stimulation was dramatic for lymphocytes and subpopulations (CD3+ and NK cells) and for cytolytic functions (NK and LAK activity). This trial establishes the feasibility of administration of high doses of rIL-2, 2 months after autologous BMT. In this setting a 6 day period of continuous infusion of 18 million per m2 per day of Proleukine appears to be a regularly tolerable dosage conducting to a major immune activation and invites further studies to determine the clinical impact of such an approach.     

Overwintering Stages of Meloidogyne incognita in Vitis vinifera

The overwintering of Meloidogyne incognita in and around Vitis vinifera cv. French Colombard roots was studied in a naturally infested vineyard at the Kearney Agricultural Center, in a growth chamber, in inoculated vines in microplots at the University of California, Davis, and in a greenhouse. Infected roots were sampled at intervals from onset of vine dormancy until plants accumulated about 800 degree days (DD - base 10 C). Embryogenesis within eggs, classified as less than or more than 16 cells and fully differentiated, and numbers of juveniles (second to fourth stage) and preovipositional and mature (egg-laying) adult stages in roots were determined. All stages were present at the onset of dormancy. Juveniles and immature females were not recovered during the dormant period. Mature females and eggs were always present in roots, although the number of mature females generally decreased with time after onset of dormancy. In contrast, in a greenhouse experiment that accumulated comparable DD without the host plant going through dormancy, the number of mature females increased. After bud break, the number of eggs per female increased and all nematode stages were found in host roots. Eggs in all stages of embryogenesis were observed at all times of sampling, indicating that females overwinter and are capable of laying eggs when conditions improve in the spring and need to be considered in nematode management decisions.     

Temporal resolution of the Florida manatee (<Emphasis Type="Italic">Trichechus manatus latirostris</Emphasis>) auditory system

Auditory evoked potential (AEP) measurements of two Florida manatees (Trichechus manatus latirostris) were measured in response to amplitude modulated tones. The AEP measurements showed weak responses to test stimuli from 4 kHz to 40 kHz. The manatee modulation rate transfer function (MRTF) is maximally sensitive to 150 and 600 Hz amplitude modulation (AM) rates. The 600 Hz AM rate is midway between the AM sensitivities of terrestrial mammals (chinchillas, gerbils, and humans) (80–150 Hz) and dolphins (1,000–1,200 Hz). Audiograms estimated from the input–output functions of the EPs greatly underestimate behavioral hearing thresholds measured in two other manatees. This underestimation is probably due to the electrodes being located several centimeters from the brain.