Conformation of the diphtheria toxin T domain in membranes: a site-directed spin-labeling study of the TH8 helix and TL5 loop.

The isolated T domain of diphtheria toxin was mutated by cysteine-scanning mutagenesis at 28 consecutive sites (residues 328-355) that comprise the TH8 helix and the TL5 interhelical loop in the native toxin. After derivatizing the mutant proteins with a sulfhydryl-selective nitroxide reagent, we examined the mobility of each nitroxide and its accessibility to polar and nonpolar paramagnetic reagents, before and after insertion into phospholipid bilayers. The data obtained with the proteins in solution at pH 8 are generally consistent with predictions from the crystal structure of the toxin. Upon membrane binding at pH 4.6, a major structural reorganization of the domain was seen, which dramatically reduced the accessibility of most residues in this region to the polar reagent nickel(II)-ethylenediaminediacetate complex (NiEDDA). Many of these residues also showed reduced accessibility to the nonpolar reagent O(2). Periodic accessibility of the nitroxide side chains along the sequence to these reagents shows that TH8 remains largely helical in the membrane-bound state, with one surface associated with protein and the other facing the hydrophobic interior of the bilayer. In addition, the TL5 loop also appears to become alpha-helical in the membrane, with one surface in contact with protein and the other in contact with the bilayer interior. These findings provide a structural framework for understanding how the T domain forms a transmembrane channel and mediates translocation of diphtheria toxin's enzymic moiety across a membrane.     

地表蒸散的遥感估算模型及其在农业干旱监测中的应用

蒸散是地表水热交换的主要过程,其空间特征差异明显,而遥感技术的发展与应用使得区域蒸散估算成为现实.本文介绍了基于能量平衡法的单层与双层遥感蒸散模型,并对这2类遥感模型的优缺点分别进行了评述和比较.重点综述了近年来得到发展和应用的大气-陆地交换反演模型(ALEXI),阐述其主要结构、特色和过程.该模型通过耦合双层能量平衡模型(TSEB)和简化边界层模型,减少以往模型对台站气象数据的依赖,明显提高区域蒸散估算精度.研究表明,基于该模型的蒸散胁迫指数(ESI)具有很强的区域干旱监测能力.在今后研究中,多元遥感数据融合技术、陆面数据同化系统与遥感蒸散模型的结合将成为该领域的研究热点.     

北美水貂和欧亚水獭在东北地区的分布与生态位重叠

作为入侵物种,北美水貂(Neovison vison)在欧洲引起了一系列生态问题,侵占了欧亚水獭(Lutra lutra)的生态空间,其入侵性对当地生物多样性和生态系统构成了严重威胁。水貂引入我国东北地区已有70多年的历史,然而国内对其野外种群却鲜有研究。掌握水貂种群的入侵范围、入侵影响因素以及与本地具有相似生态位的欧亚水獭之间的竞争关系,对水貂的入侵管理和东北地区的生物多样性保护具有重要意义。本研究利用实地调查和文献资料获取的分布信息,通过集合模型识别水貂和水獭的潜在分布区,评估水貂对水獭在地理空间上的入侵风险,并通过主成分分析(principal component analysis,PCA)评估其生态位重叠和影响因素。结果表明:(1)我国东北地区水貂的潜在分布区面积为61,944.57 km²,水獭的潜在分布区面积为83,590.94 km²,两者重叠区域面积为50,544.21 km²,占水獭潜在分布区面积的60.47%;(2)从各省分布情况来看,黑龙江省水獭受水貂入侵的风险最高,潜在分布区重叠的比例达到78.9...     

Tim-3 pathway controls regulatory and effector T cell balance during hepatitis C virus infection

Hepatitis C virus (HCV) is remarkable at disrupting human immunity to establish chronic infection. Upregulation of inhibitory signaling pathways (such as T cell Ig and mucin domain protein-3 [Tim-3]) and accumulation of regulatory T cells (Tregs) play pivotal roles in suppressing antiviral effector T cell (Teff) responses that are essential for viral clearance. Although the Tim-3 pathway has been shown to negatively regulate Teffs, its role in regulating Foxp3(+) Tregs is poorly explored. In this study, we investigated whether and how the Tim-3 pathway alters Foxp3(+) Treg development and function in patients with chronic HCV infection. We found that Tim-3 was upregulated, not only on IL-2-producing CD4(+)CD25(+)Foxp3(-) Teffs, but also on CD4(+)CD25(+)Foxp3(+) Tregs, which accumulate in the peripheral blood of chronically HCV-infected individuals when compared with healthy subjects. Tim-3 expression on Foxp3(+) Tregs positively correlated with expression of the proliferation marker Ki67 on Tregs, but it was inversely associated with proliferation of IL-2-producing Teffs. Moreover, Foxp3(+) Tregs were found to be more resistant to, and Foxp3(-) Teffs more sensitive to, TCR activation-induced cell apoptosis, which was reversible by blocking Tim-3 signaling. Consistent with its role in T cell proliferation and apoptosis, blockade of Tim-3 on CD4(+)CD25(+) T cells promoted expansion of Teffs more substantially than Tregs through improving STAT-5 signaling, thus correcting the imbalance of Foxp3(+) Tregs/Foxp3(-) Teffs that was induced by HCV infection. Taken together, the Tim-3 pathway appears to control Treg and Teff balance through altering cell proliferation and apoptosis during HCV infection.     

Mutant <Emphasis Type="Italic">TP53</Emphasis> G245C and R273H promote cellular malignancy in esophageal squamous cell carcinoma

Background

TP53 gene mutations occur in more than 50% of human cancers and the vast majority of these mutations in human cancers are missense mutations, which broadly occur in DNA binding domain (DBD) (Amino acids 102–292) and mainly reside in six “hotspot” residues. TP53 G245C and R273H point mutations are two of the most frequent mutations in tumors and have been verified in several different cancers. In the previous study of the whole genome sequencing (WGS), we found some mutations of TP53 DBD in esophageal squamous cell carcinoma (ESCC) clinical samples. We focused on two high-frequent mutations TP53 p.G245C and TP53 p.R273H and investigated their oncogenic roles in ESCC cell lines, p53-defective cell lines H1299 and HCT116 p53?/?.

Results

MTS and colony formation assays showed that mutant TP53 G245C and R273H increased cell vitality and proliferation. Flow cytometry results revealed inhibition of ultraviolet radiation (UV)- and ionizing radiation (IR)- induced apoptosis and disruption of TP53-mediated cell cycle arrest after UV, IR and Nocodazole treatment. Transwell assays indicated that mutant TP53 G245C and R273H enhanced cell migration and invasion abilities. Moreover, western blot revealed that they were able to suppress the expression of TP53 downstream genes in the process of apoptosis and cell cycle arrest induced by UV, which suggests that these two mutations can influence apoptosis and growth arrest might be due, at least in part, to down-regulate the expression of P21, GADD45α and PARP.

Conclusions

These results indicate that mutant TP53 G245C and R273H can lead to more aggressive phenotypes and enhance cancer cell malignancy, which further uncover TP53 function in carcinogenesis and might be useful in clinical diagnosis and therapy of TP53 mutant cancers.

     

Missense SNP of the MC1R gene is associated with plumage variation in the Gyrfalcon (Falco rusticolus)

A single nucleotide polymorphism (MC1R: c.376A>G) in the MC1R gene was found to be highly correlated with pigment phenotype in the Gyrfalcon. Homozygous genotypes c.376GG and c.376AA were found to dominate the extreme white and dark plumage types respectively, and heterozygotes occurred mainly in intermediate phenotypes. However, some heterozygotes were associated with extreme phenotypes, indicating that melanism/albinism might also involve other loci.     

砷超富集植物蜈蚣草原生质体的分离及其抗砷性分析

蜈蚣草（Pteris vittata）是一种砷超富集植物,能够通过根从土壤中吸收砷,并将其输送至羽叶中富集.为了探索蜈蚣草单个细胞在砷积累和砷抗性中的特性,本文首次通过酶解方法获得了这一砷超富集蕨类植物的原生质体,并研究了原生质体在不同浓度砷胁迫下的生活力.结果显示,蜈蚣草原生质体的抗砷性远高于烟草原生质体的抗砷性,与其整体植株的抗性一致.这为探索砷抗性和超富集机理提供了一个新的研究体系.     

塔克拉玛干沙漠腹地胡杨林土壤细菌多样性分析

【目的】对塔克拉玛干沙漠腹地胡杨林土壤细菌多样性进行初步探索,为下一步从中筛选可用于生物饲料或生物肥料的微生物奠定基础。【方法】采用可培养方法,进行细菌的分离纯化。对各菌株进行革兰氏染色及淀粉酶、酯酶、纤维素酶和NaCl耐受浓度的测定,并提取各菌株基因组DNA,进行16SrRNA基因扩增、测序及系统进化树的绘制,分析其多样性。【结果】共分离得到27株菌,其中放线菌门(Actinobacteria)16株,变形菌门(Proteobacteria)4株,厚壁菌门(Firmicutes)6株,拟杆菌门(Bacteroidetes)1株。革兰氏染色结果表明,5株菌为革兰氏阴性,其余为革兰氏阳性;酶活测定结果表明,15株菌具有淀粉酶活性,9株菌具有酯酶活性,9株菌具有纤维素酶活性;NaCl耐受浓度测定结果显示,NaCl浓度为2%时所有菌株均能生长,5%时能生长的有22株,15%时能生长的有1株。【结论】塔克拉玛干沙漠腹地胡杨林土壤中存在较丰富的细菌类群,且具有一定的酶学活性和NaCl耐受性,具有进一步研究开发的价值。