A pilot study of the performance of captive-reared delta smelt Hypomesus transpacificus in a semi-natural environment

A captive breeding programme was developed in 2008 for delta smelt Hypomesus transpacificus in reaction to dramatic population decline over several decades. We took 526 sub-adult captive-reared delta smelt and cultured them for 200 days without providing artificial food or water quality management to assess their performance once released in the wild. The results indicated captive-reared sub-adult delta smelt could survive in a semi-natural environment with uncontrolled water quality and naturally produced wild prey through spawning and into their post spawning phase.     

Diverse avian malaria and other haemosporidian parasites in Andean house wrens: evidence for regional co‐diversification by host‐switching

Recent research has revealed well over 1000 mtDNA lineages of avian haemosporidian parasites, but the extent to which this diversity is caused by host–parasite coevolutionary history or environmental heterogeneity is unclear. We surveyed haemosporidian and host mtDNA in a geographically structured, ecological generalist species, the house wren Troglodytes aedon, across the complex landscape of the Peruvian Andes. We detected deep genetic structure within the house wren across its range, represented by seven clades that were between 3.4–5.7% divergent. From muscle and liver tissue of 140 sampled house wrens we found 23 divergent evolutionary lineages of haemosporidian mtDNA, of which ten were novel and apparently specific to the house wren based on searches of haemosporidian databases. Combined and genus‐specific haemosporidian abundance differed significantly across environments and elevation, with Leucocytozoon parasites strongly associated with montane habitats. We observed spatial stratification of haemosporidians along the west slope of the Andes where five lineages were restricted to non‐overlapping elevational bands. Individual haemosporidian lineages varied widely with respect to host specificity, prevalence, and geographic distribution, with the most host‐generalist lineages also being the most prevalent and widely distributed. Despite the deep divergences within the house wren, we found no evidence for host‐specific co‐diversification with haemosporidians. Instead, host‐specific haemosporidian lineages in the genus Haemoproteus were polyphyletic with respect to the New World parasite fauna and appeared to have diversified by periodic host‐switches involving distantly related avian species within the same region. These host‐specific lineages appeared to have diversified contemporaneously with Andean house wrens. Taken together, these findings suggest a model of diffuse co‐diversification in which host and parasite clades have diversified over the same time period and in the same geographic area, but with parasites having limited or ephemeral host specificity.     

Weather and regional crop composition variation drive spatial synchrony of lepidopteran agricultural pests

1. Spatial synchrony, the tendency for temporal population fluctuations to be correlated across multiple locations at regional scales, is common and contributes to the severity of outbreaks and epidemics, but is little studied in agricultural pests. 2. This study analysed spatial synchrony from 1974 to 2008 in 16 lepidopteran agricultural pests in Maryland, U.S.A., and investigated whether pest synchrony is driven by interannual variability in seasonal weather and the areas planted in different crop types. 3. Lepidopteran pests exhibited high degrees of spatial synchrony, which was driven by environmental variation, a phenomenon known as the Moran effect. Region-wide variation in the areas planted in major crops drove spatially synchronous abundance fluctuations in more than half of studied species. The combination of weather and crop composition explained large fractions of synchrony in black cutworm, corn earworm, European corn borer, and spotted cutworm populations. Other pests, including forage looper and variegated cutworm, displayed a high degree of spatial synchrony, but without dependence on the tested drivers. 4. The study finding that synchronous variation in the area planted in different crop types contributed to synchronous pest abundance fluctuations suggests that strategies to reduce synchrony in changes in crop type across a region could reduce the severity of pest outbreaks and enhance the stability of agricultural systems.     

Involvement of CSF-1 in generating a stroma-independent hematopoietic stem cell line

The hematopoietic stem cell line, Myl-D7, is maintained by a self-renewing stem cell population that spontaneously generates myeloid, lymphoid, and erythroid progeny. MS-5 stromal cells are necessary for the growth of Myl-D7 cells. One component of the Myl-D7 cells proliferation activity released by MS-5 stromal cells was enriched by Q sepharose fractionation and shown to be colony stimulating factor-1 (CSF-1) by Western blotting, BAC1.2F5 cell bioassay and inhibition of Myl-D7 proliferation by CSF-1 antibody. The requirement of Myl-D7 cells for CSF-1 was also demonstrated independently by selecting for rare, stroma-independent Myl-D7 mutant clones able to grow without stroma and additional factors. Eighty-nine stroma-independent mutant clones were obtained and belonged to two classes. The majority of mutants did not secrete any growth promoting activity. The second, rarer class of mutants releases a factor that stimulates proliferation/survival for up to several months and approximately half of the secretors express high levels of CSF-1 mRNA. Wild type Myl-D7 grown with supernatants from the secretor cells retained the stem cell phenotype. These data suggest that CSF-1 may act as a key factor in stroma-regulated hematopoiesis and cell-cell interaction.     

Dosage-dependent impacts of a floral volatile compound on pollinators, larcenists, and the potential for floral evolution in the alpine skypilot Polemonium viscosum

All volatile organic compounds (VOCs) vary quantitatively, yet how such variation affects their ecological roles is unknown. Because floral VOCs are cues for both pollinators and floral antagonists, variation in emission may have major consequences for costs and benefits in plant-pollinator interactions. In Polemonium viscosum, the emission rate for the floral VOC 2-phenylethanol (2PE) spans more than two orders of magnitude. We investigated the ecological and evolutionary impacts of this immense phenotypic variation. The emission rate of 2PE varies independently of nectar rewards and thus is uninformative of profitability. Emission is elevated in flowers that are morphologically vulnerable to ant larcenists, suggesting that chemical deterrence may compensate for weak physical barriers. In nature, plants emitting more 2PE than their neighbors escape ant damage. Flower-damaging ants die when exposed to 2PE in the laboratory, and they avoid high 2PE emitters in the field. High 2PE also reduces bumblebee visitation and pollination, suggesting an ecological cost of defense in pollinator service. However, at more moderate emission rates, 2PE enhances the amount of nectar left in flowers, at no pollination cost. In conclusion, repellency of 2PE is highly sensitive to dosage, giving it a key role in shaping ecological interactions between skypilot plants and their floral visitors.     

Between a rock and a hard place: impact of nest selection behavior on the altitudinal range of an alpine ant, Formica neorufibarbis

Formica neorufibarbis Emery is a dominant alpine ant in North America. Above timberline, colonies nest under rocks, placing brood against the rock surface to warm during the day. We tested the hypothesis that nest rock preference represents a mechanism of behavioral thermoregulation and used a demographic model to explore its impact on the species' altitudinal range. Under sunny conditions rocks provide warm microclimates. Across a 400-m altitudinal gradient from below timberline to high alpine tundra, nest rocks warmed on average 5°C above ambient at mid-day, but cooled to near ambient before dawn. Soil was warmer at mid-day under rocks occupied by ants than under randomly chosen unoccupied rocks in the same area. Occupied nest rocks were painted white or black to manipulate temperature and test its impact on colony occupancy. In addition, black-painted and white-painted rocks of similar size were placed in the field to test for a temperature effect on nest site colonization. Likelihood of nest persistence and colonization decreased under cooler, white-painted rocks and depended strongly on rock warming capacity. Experimental results showed that nest site colonization and occupancy are favored in microsites maintaining mid-day temperature ≥22°C. Across the altitudinal gradient, 66-90% of nest microsites occupied by F. neorufibarbis met this temperature threshold. Conversely, none of the exposed microsites and only 15% of those microsites under randomly selected rocks warmed to 22°C at the high altitude site (3,900 m). Results support the conclusion that nest site preference contributes to the broad altitudinal distribution of F. neorufibarbis.     

Analysis of the lung microbiome in the "healthy" smoker and in COPD

Although culture-independent techniques have shown that the lungs are not sterile, little is known about the lung microbiome in chronic obstructive pulmonary disease (COPD). We used pyrosequencing of 16S amplicons to analyze the lung microbiome in two ways: first, using bronchoalveolar lavage (BAL) to sample the distal bronchi and air-spaces; and second, by examining multiple discrete tissue sites in the lungs of six subjects removed at the time of transplantation. We performed BAL on three never-smokers (NS) with normal spirometry, seven smokers with normal spirometry ("healthy smokers", HS), and four subjects with COPD (CS). Bacterial 16 s sequences were found in all subjects, without significant quantitative differences between groups. Both taxonomy-based and taxonomy-independent approaches disclosed heterogeneity in the bacterial communities between HS subjects that was similar to that seen in healthy NS and two mild COPD patients. The moderate and severe COPD patients had very limited community diversity, which was also noted in 28% of the healthy subjects. Both approaches revealed extensive membership overlap between the bacterial communities of the three study groups. No genera were common within a group but unique across groups. Our data suggests the existence of a core pulmonary bacterial microbiome that includes Pseudomonas, Streptococcus, Prevotella, Fusobacterium, Haemophilus, Veillonella, and Porphyromonas. Most strikingly, there were significant micro-anatomic differences in bacterial communities within the same lung of subjects with advanced COPD. These studies are further demonstration of the pulmonary microbiome and highlight global and micro-anatomic changes in these bacterial communities in severe COPD patients.