一类一级饱和反应系统的极限环

本文研究生化反应中一类饱和反应的数学模型：应用微分方程定性理论,完整地解决了该系统极限环的存在性、唯一性和不存在性等问题．     

Population structure of North Atlantic and North Pacific sei whales (<Emphasis Type="Italic">Balaenoptera borealis</Emphasis>) inferred from mitochondrial control region DNA sequences and microsatellite genotypes

Currently, three stocks of sei whales (Balaenoptera borealis) are defined in the North Atlantic; the Nova Scotian, Iceland-Denmark Strait and Eastern North Atlantic stocks, which are mainly based upon historical catch and sighting data. We analyzed mitochondrial control region DNA (mtDNA) sequences and genotypes from 7 to 11 microsatellite loci in 87 samples from three sites in the North Atlantic; Iceland, the Gulf of Maine and the Azores, and compared against the North Pacific using 489 previously published samples. No statistically significant deviations from homogeneity were detected among the North Atlantic samples at mtDNA or microsatellite loci. The genealogy estimated from the mtDNA sequences revealed a clear division of the haplotypes into a North Atlantic and a North Pacific clade, with the exception of one haplotype detected in a single sample from the Azores, which was included in the North Pacific clade. Significant genetic divergence between the North Atlantic and North Pacific Oceans was detected (mtDNA Φ_ST?=?0.72, microsatellite Weir and Cockerham’s ? = 0.20; p?<?0.001). The coalescent-based estimate of the population divergence time between the North Atlantic and North Pacific populations from the sequence variation among the mtDNA sequences was at 163,000 years ago. However, the inference was limited by an absence of samples from the Southern Hemisphere and uncertainty regarding mutation rates and generation times. The estimates of inter-oceanic migration rates were low (Nm at 0.007 into the North Pacific and at 0.248 in the opposite direction). Although estimates of genetic divergence among the current North Atlantic stocks were low and consistent with the extensive range of movement observed in satellite tagged sei whales, the high uncertainty of the genetic divergence estimates precludes rejection of multiple stocks in the North Atlantic.     

一株沙门氏菌拮抗菌的筛选及其在污染土壤原位修复中的应用

利用无菌滤纸片平板法从沙门氏菌(Salmonella)污染土壤中筛选到一株有效拮抗沙门氏菌的细菌A45,通过形态学、革兰氏染色和16SrDNA序列同源性分析鉴定为产碱杆菌(Alcaligenes sp.)。温室土培试验和田间原位试验结果都发现,利用该菌株制备的沙门氏菌拮抗菌剂能显著降低土壤中沙门氏菌数量(P0.05),与对照相比土壤中沙门氏菌数量下降2-3个数量级,表明该拮抗细菌可应用于沙门氏菌污染土壤的修复。     

Newly Detected Specific Hydrogenation of the Conjugated Double Bond of Unsaturated Alkaloid Lactones by Aspergillus sp.

A new isolate of Aspergillus sp. hydrogenated the γ,δ-double bond of securinine (143 mg l⁻¹) to give 14,15-dihydrosecurinine at over 98% (w/w) yield after 8 h. It also hydrogenated the C11(13) double bond of 3-hydroxy-1(10),3,11(13)-guaiatriene-12,6-olide-2-one (HGT) (200 mg l⁻¹) to give 3-hydroxy-1(10),3-guaiadiene-12,6-olide-2-one with over 98% (w/w) conversion after 24 h.     

转基因抗除草剂油菜对近缘作物的基因漂移

以转基因抗除草剂油菜 Q3和 HCN- 19为花粉供体材料 ,油菜近缘作物为花粉受体材料 ,在自然授粉条件下研究甘蓝型油菜与芸薹属近缘作物间的基因漂移频率。结果表明 ,油菜对芸薹属 6个种甘蓝、黑芥、埃芥、芥菜型油菜、白菜型油菜和甘蓝型油菜的基因漂移率分别为 0、0 .0 2 4 %～ 0 .2 4 3%、 0 .0 2 8%～ 0 .0 92 %、 0 .10 9%～ 0 .95 1%、 0 .4 79%～ 0 .879%、 1.2 5 2 %～2 .191%。且基因漂移频率受多种因素影响 ,其中与杂交亲和性、花期同步率、种植面积等高度相关。通过花粉将抗除草剂基因漂移给近缘作物 ,油菜是需要特别关注的作物     

荧光定量PCR检测家蚕核型多角体病毒在其宿主体内的增殖动态

为了研究家蚕核型多角体病毒(Bombyx mori nuclear polyhedrosis virus,BmNPV)在其宿主幼虫体内不同组织中的增殖动态,对敏感性家蚕品种306幼虫进行经口定量滴注病毒。在接种后9个时间点,对中肠、血淋巴和脂肪体进行取样。以BmNPV DNA 聚合酶基因(dnapol)指示病毒拷贝数,同时以家蚕细胞质肌动蛋白A3(actin A3)基因作为参比基因,用荧光定量PCR的方法分别检测各个时间点的中肠、血淋巴和脂肪体中病毒的拷贝数。结果表明经口感染2 h,病毒进入中肠;12 h,病毒已经到达血淋巴和脂肪体;再经过约12 h的潜伏期,病毒在各组织中开始快速增殖,到84 h各组织中病毒增殖达到平台期。     

不同光强对入侵种三裂叶豚草表型可塑性的影响

通过人工遮光,研究了不同光照强度下入侵植物三裂叶豚草的形态、生物量分配以及光合特性的表型可塑性.结果表明:与对照相比,遮光条件下,三裂叶豚草的株高、冠宽、单株叶面积、比叶面积和叶生物量比重显著增加,总生物量、单位叶面积生物量和根冠比减小;在全光照条件下,其冠宽和单株叶面积较小,根冠比较大,有利于高温强光下减少水分散失,表现出对不同光强较强的形态和生物量可塑性.遮光使三裂叶豚草叶片的日均净光合速率、蒸腾速率和气孔导度下降,胞间CO2浓度上升.正午光照最强时,低遮光处理植株的净光合速率、蒸腾速率和气孔导度最大.中遮光和高遮光条件下,其叶绿素含量显著增加,叶绿素a/b显著减小,有利于提高三裂叶豚草的光能利用效率,以适应弱光环境.     

Effects of organic matter incorporation on nitrous oxide emissions from rice-wheat rotation ecosystems in China

Organic matter addition is thought to be an important regulator of nitrous oxide (N₂O) emissions from croplands. Contradictory effects, however, were reported in previous studies. To investigate the effects of crop residue management on N₂O emissions from rice-wheat rotation ecosystems, we conducted field experiments at three sites (Suzhou, Wuxi and Jiangdu) in the Yangtze River Delta, using static chamber and gas chromatography methods. Our data show that N₂O emissions throughout the rice season from plots treated with wheat straw application at a high rate (WS) prior to rice transplanting (1.1–2.0 kg N ha^?1) were significantly lower (P?<?0.05) than those from the control plots without organic matter addition or added with wheat straw at a moderate rate (1.6–2.9 kg N ha^?1). Furthermore, the WS treatments had a residual inhibitory effect on N₂O emissions in the following non-rice season, which consistently resulted in significantly lower emissions (P?<?0.05) compared to the control treatments (2.2–3.1 vs. 3.9–5.6 kg N ha^?1). In comparison to the control treatments, the WS treatments reduced both the seasonal and annual direct emission factors of the applied nitrogen (EF_d) by 50–68% (mean: 57%). The addition of compost (aerobically composted rice or wheat straw harvested in the last rotation) reduced the seasonal and annual EF_ds by 29–32%. Over the entire rice-wheat rotation cycle, annual N₂O emissions from the fertilized fields at the three sites ranged from 3.3?±?0.3 to 16.8?±?0.6 kg N ha^?1, with a coefficient of variation (CV) of 61%. Similarly, the EF_ds during the rice-wheat rotation cycle ranged from 0.4% to 2.5%, with a CV of 67%. These high spatial variations might have been related to: variations in soil properties, such as texture and soil organic carbon; management practices, such as straw treatments (i.e., compost versus fresh straw) and weather conditions, such as precipitation and rainfall distribution. Our results indicate that the incorporation of fresh wheat straw at a high rate during the rice season is an effective management practice for the mitigation of N₂O emissions in rice-wheat rotation systems. Whether this practice is also effective in reducing the overall global warming potential of net N₂O, CH₄ and CO₂ emissions needs to be seen through further studies.     

Functional and structural characterization of synthetic cardosin B-derived rennet

The potential of using a synthetic cardosin-based rennet in cheese manufacturing was recently demonstrated with the development and optimization of production of a recombinant form of cardosin B in Kluyveromyces lactis. With the goal of providing a more detailed characterization of this rennet, we herein evaluate the impact of the plant-specific insert (PSI) on cardosin B secretion in this yeast, and provide a thorough analysis of the specificity requirements as well as the biochemical and structural properties of the isolated recombinant protease. We demonstrate that the PSI domain can be substituted by different linker sequences without substantially affecting protein secretion and milk clotting activity. However, the presence of small portions of the PSI results in dramatic reductions of secretion yields in this heterologous system. Kinetic characterization and specificity profiling results clearly suggest that synthetic cardosin B displays lower catalytic efficiency and is more sequence selective than native cardosin B. Elucidation of the structure of synthetic cardosin B confirms the canonical fold of an aspartic protease with the presence of two high mannose-type, N-linked glycan structures; however, there are some differences in the conformation of the flap region when compared to cardosin A. These subtle variations in catalytic properties and the more stringent substrate specificity of synthetic cardosin B help to explain the observed suitability of this rennet for cheese production.     

T Cell receptor clonotype influences epitope hierarchy in the CD8+ T cell response to respiratory syncytial virus infection

CD8+ T cell responses are important for recognizing and resolving viral infections. To better understand the selection and hierarchy of virus-specific T cell responses, we compared the T cell receptor (TCR) clonotype in parent and hybrid strains of respiratory syncytial virus-infected mice. K(d)M2(82-90) (SYIGSINNI) in BALB/c and D(b)M(187-195) (NAITNAKII) in C57Bl/6 are both dominant epitopes in parent strains but assume a distinct hierarchy, with K(d)M2(82-90) dominant to D(b)M(187-195) in hybrid CB6F1/J mice. The dominant K(d)M2(82-90) response is relatively public and is restricted primarily to the highly prevalent Vβ13.2 in BALB/c and hybrid mice, whereas D(b)M(187-195) responses in C57BL/6 mice are relatively private and involve multiple Vβ subtypes, some of which are lost in hybrids. A significant frequency of TCR CDR3 sequences in the D(b)M(187-195) response have a distinct "(D/E)WG" motif formed by a limited number of recombination strategies. Modeling of the dominant epitope suggested a flat, featureless structure, but D(b)M(187-195) showed a distinctive structure formed by Lys(7). The data suggest that common recombination events in prevalent Vβ genes may provide a numerical advantage in the T cell response and that distinct epitope structures may impose more limited options for successful TCR selection. Defining how epitope structure is interpreted to inform T cell function will improve the design of future gene-based vaccines.