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81.
Rory J. Todhunter Raluca Mateescu George Lust Nancy I. Burton-Wurster Nathan L. Dykes Stuart P. Bliss Alma J. Williams Margaret Vernier-Singer Elizabeth Corey Carlos Harjes Richard L. Quaas Zhiwu Zhang Robert O. Gilbert Dietrich Volkman George Casella Rongling Wu Gregory M. Acland 《Mammalian genome》2005,16(9):720-730
Canine hip dysplasia is a common developmental inherited trait characterized by hip laxity, subluxation or incongruity of
the femoral head and acetabulum in affected hips. The inheritance pattern is complex and the mutations contributing to trait
expression are unknown. In the study reported here, 240 microsatellite markers distributed in 38 autosomes and the X chromosome
were genotyped on 152 dogs from three generations of a crossbred pedigree based on trait-free Greyhound and dysplastic Labrador
Retriever founders. Interval mapping was undertaken to map the QTL underlying the quantitative dysplastic traits of maximum
passive hip laxity (the distraction index), the dorsolateral subluxation score, and the Norberg angle. Permutation testing
was used to derive the chromosome-wide level of significance at p < 0.05 for each QTL. Chromosomes 4, 9, 10, 11 (p < 0.01), 16, 20, 22, 25, 29 (p < 0.01), 30, 35, and 37 harbor putative QTL for one or more traits. Successful detection of QTL was due to the crossbreed
pedigree, multiple-trait measurements, control of environmental background, and marked advancement in canine mapping tools. 相似文献
82.
Slipped-strand mispairing: a major mechanism for DNA sequence evolution 总被引:128,自引:13,他引:128
Simple repetitive DNA sequences are a widespread and abundant feature of
genomic DNA. The following several features characterize such sequences:
(1) they typically consist of a variety of repeated motifs of 1-10
bases--but may include much larger repeats as well; (2) larger repeat units
often include shorter ones within them; (3) long polypyrimidine and poly-CA
tracts are often found; and (4) tandem arrangements of closely related
motifs are often found. We propose that slipped-strand mispairing events,
in concert with unequal crossing- over, can readily account for all of
these features. The frequent occurrence of long tandem repeats of
particular motifs (polypyrimidine and poly-CA tracts) appears to result
from nonrandom patterns of nucleotide substitution. We argue that the
intrahelical process of slipped-strand mispairing is much more likely to be
the major factor in the initial expansion of short repeated motifs and
that, after initial expansion, simple tandem repeats may be predisposed to
further expansion by unequal crossing-over or other interhelical events
because of their propensity to mispair. Evidence is presented that
single-base repeats (the shortest possible motifs) are represented by
longer runs in mammalian introns than would be expected on a random basis,
supporting the idea that SSM may be a ubiquitous force in the evolution of
the eukaryotic genome. Simple repetitive sequences may therefore represent
a natural ground state of DNA unselected for coding functions.
相似文献
83.
Randall B. Murphy Matthew R. Pincus Margery Beinfeld Daryll C. Dykes James M. Chen Linda H. Schneider James Gibbs Gerard P. Smith 《Journal of Protein Chemistry》1992,11(6):723-729
Prior calculations based on ECEPP (Empirical Conformational Energies for Peptides Program) of the low energy minima for cholecystokinin (CCK) and Met-enkephalin have demonstrated that significant structural features of these two peptides are identical. This result suggested the possibility that Met-enkephalin, as well as other enkephalin analogues of similar structure, could associate with receptors for CCK. To test this theoretical result, we examined the ability of Met-enkephalin and its analogues to bind to peripheral CCK receptors in the rat gastrointestinal tract; in particular, we measured the ability of the opiate peptide to inhibit the effects of CCK in a physiological assay system which we have previously characterized: CCK-induced contraction of the isolated rat pyloric sphincter. We find that Met-enkephalin is an antagonist of the CCK-8-induced contraction, with a IC50 of 110 nM. Furthermore, antibodies against CCK were found to cross-react with Met-enkephalin and its analogues in a manner which suggests a distinct structure-activity relationship. These experimental results strongly support the theoretical results of conformational analysis showing structural similarity between enkephalin and CCK. They further suggest that enkephalins could modulate the response of CCK systems under physiological conditions. 相似文献
84.
Summary Detection of the ESD*5 gene products was simplified by the use of isoelectric focusing (IEF). Gene frequencies for ESD*5 in whites, blacks and Amerindians from the State of Minnesota were 0.019, 0.002 and 0.000, respectively. The gene frequencies observed in the white data set were similar to those reported for European whites. 相似文献
85.
86.
The use of stem or progenitor cells from bone marrow, or peripheral or umbilical cord blood is becoming more common for treatment of diabetic foot problems. These cells promote neovascularization by angiogenic factors and they promote epithelium formation by stimulating cell replication and migration under certain pathological conditions. We investigated the role of CD34 + stem cells from human umbilical cord blood in wound healing using a rat model. Rats were randomly divided into a control group and two groups with diabetes induced by a single dose of 55 mg/kg intraperitoneal streptozocin. Scarred areas 5 mm in diameter were created on the feet of all rats. The diabetic rats constituted the diabetes control group and a diabetes + stem cell group with local injection into the wound site of 0.5 × 106 CD34 + stem cells from human umbilical cord blood. The newly formed skin in the foot wounds following CD34 + stem cell treatment showed significantly improvement by immunohistochemistry and TUNEL staining, and were closer to the wound healing of the control group than the untreated diabetic animals. The increase in FGF expression that accompanied the local injection of CD34 + stem cells indicates that FGF stimulation helped prevent apoptosis. Our findings suggest a promising new treatment approach to diabetic wound healing. 相似文献
87.
Summary Phenotyping for Gc variants by conventional electrophoresis in 835 Papio hamadryas baboons demonstrated a monomorphic population. Gc subtyping by polyacrylamide IEF gels, pH 4–6, on 394 of these baboons revealed the existence of two common alleles which we named Gc
Papio
1
and Gc
Papio
2
. Pedigree data confirmed the inheritance of a single locus, two allele system and the observed gene frequencies were 0.593 for Gc
Papio
1
and 0.407 for Gc
Papio
2
. 相似文献
88.
89.
Initial verification of the resistance management strategy for Frankliniella
occidentalis (Pergande) (Thysanoptera: Thripidae) in Australia 总被引:1,自引:1,他引:1
Shortly after the initial detection of western flower thrips (WFT), Frankiniella occidentalis (Pergande), in Australia during 1993 a resistance management strategy based on the alternation of chemical groups was implemented. This study aimed to verify this strategy by field testing α-cypermethrin against WFT with and without chemical alternation. Up to 114 times α-cypermethrin resistance (at LC50) was detected and resistance increased with and without chemical alternation; however, chemical alternation did significantly reduce numbers of thrips compared with a nonalternation strategy. Resistance has the potential to undermine the sustainable use of those chemicals to which there is no current detectable resistance. Consequently, chemicals with a high frequency and level of resistance against WFT need to be identified through monitoring and quickly eliminated from WFT chemical control recommendations. 相似文献
90.
Modeling and estimation of replication fitness of human immunodeficiency virus type 1 in vitro experiments by using a growth competition assay 下载免费PDF全文
Growth competition assays have been developed to quantify the relative fitnesses of human immunodeficiency virus (HIV-1) mutants. In this article we develop mathematical models to describe viral/cellular dynamic interactions in the assay experiment, from which new competitive fitness indices or parameters are defined. These indices include the log fitness ratio (LFR), the log relative fitness (LRF), and the production rate ratio (PRR). From the population genetics perspective, we clarify the confusion and correct the inconsistency in the definition of relative fitness in the literature of HIV-1 viral fitness. The LFR and LRF are easier to estimate from the experimental data than the PRR, which was misleadingly defined as the relative fitness in recent HIV-1 research literature. Calculation and estimation methods based on two data points and multiple data points were proposed and were carefully studied. In particular, we suggest using both standard linear regression (method of least squares) and a measurement error model approach for more-accurate estimates of competitive fitness parameters from multiple data points. The developed methodologies are generally applicable to any growth competition assays. A user-friendly computational tool also has been developed and is publicly available on the World Wide Web at http://www.urmc.rochester.edu/bstools/vfitness/virusfitness.htm. 相似文献