Identification and characterisation of a homolog of an activation gene for the recombination activating gene 1 (RAG 1) in amphioxus

Expression of recombination activating genes (RAG) involved in the V (D) J recombination is regulated by the RAG1 gene activator (RGA) in mammals. The sequence of a cDNA clone from an amphioxus cDNA library was found to be homologous to that of RGA from mouse stromal cells with 45% identity. The full-length cDNA sequence comprises 1119 bp and encodes a putative protein of 210 amino acid residues. Characterisation of the amino acid sequence revealed that two MtN3 domains and seven transmembrane spans are present in this protein, indicating a potential role as a plasma membrane protein. This gene is expressed in many tissues and at differential developmental stages. A high expression level of RGA is detected in gonad tissues, and gastrula embryo and adult stages. The presence of the RGA gene in amphioxus suggests that the signal pathway required for the expression of RAG could exist in this primitive protochordate. It also implies that in the related molecules, primitive adaptive immunity may have existed in cephalochordate although the complete machinery of VDJ rearrangement may not be formed.     

Paleogene fossil fruits of Stephania (Menispermaceae) from North America and East Asia

Stephania Loureiro is a large genus within Menispermaceae, with approximately 60 extant species naturally distributed in tropical to subtropical areas in Asia and Africa, and a few in Oceania. This genus possesses highly characteristic endocarps that facilitate identification of extant and fossil specimens. Here, we report some well-preserved fossil fruits of Stephania from North America and East Asia. The specimens indicate the endocarps were bony or woody with an obovate to obovate-rotund outline and a horseshoe-shaped locule. The endocarp length varies from 4.7 to 8.3 mm, and width from 3.7 to 7.0 mm. The endocarp has a clear foramen in the central area and is surrounded by a keel with ribs running along the dorsal surface. Only one lateral crest develops on each side of the endocarp. Two new species are recognized: Stephania wilfii Han & Manchester sp. nov. from the Paleocene to Eocene of Wyoming (USA), and Stephania jacquesii Han & Manchester sp. nov. disjunct between the late Eocene of Oregon (USA) and the late Oligocene of Guangxi Province (China). In addition, on the basis of more detailed morphological comparative analyses, we transfer the fossils formerly treated as Diploclisia auriformis (Hollick) Manchester from the early Eocene of London Clay, and the middle Eocene of Alaska and Oregon to Stephania auriformis (Hollick) Han & Manchester comb. nov. These fossil materials indicate a broader biogeographic distribution for the ancestors of extant Stephania lineages. This finding enhances our knowledge of the taxonomic and morphological diversity of Stephania and provides new evidence concerning its phytogeographic history.     

New insights into the karyotypic relationships of Chinese muntjac (Muntiacus reevesi), forest musk deer (Moschus berezovskii) and gayal (Bos frontalis)

To investigate the karyotypic relationships between Chinese muntjac (Muntiacus reevesi), forest musk deer (Moschus berezovskii) and gayal (Bos frontalis), a complete set of Chinese muntjac chromosome-specific painting probes has been assigned to G-banded chromosomes of these three species. Sixteen autosomal probes (i.e. 6-10, 12-22) of the Chinese muntjac each delineated one pair of conserved segments in the forest musk deer and gayal, respectively. The remaining six autosomal probes (1-5, and 11) each delineated two to five pairs of conserved segments. In total, the 22 autosomal painting probes of Chinese muntjac delineated 33 and 34 conserved chromosomal segments in the genomes of forest musk deer and gayal, respectively. The combined analysis of comparative chromosome painting and G-band comparison reveals that most interspecific homologous segments show a high degree of conservation in G-banding patterns. Eleven chromosome fissions and five chromosome fusions differentiate the karyotypes of Chinese muntjac and forest musk deer; twelve chromosome fissions and six fusions are required to convert the Chinese muntjac karyotype to that of gayal; one chromosome fission and one fusion separate the forest musk deer and gayal. The musk deer has retained a highly conserved karyotype that closely resembles the proposed ancestral pecoran karyotype but shares none of the rearrangements characteristic for the Cervidae and Bovidae. Our results substantiate that chromosomes 1-5 and 11 of Chinese muntjac originated through exclusive centromere-to-telomere fusions of ancestral acrocentric chromosomes.     

非律平菌素干扰甲基硝基亚硝基胍对FL细胞鞘脂代谢的影响

甲基硝基亚硝基胍（MNNG）可通过脂筏诱导细胞表面受体聚簇并激活NF-κB信号通路.本研究拟探讨脂筏干扰剂非律平菌素（filipin）对MNNG作用的影响.利用脂类组学方法分别研究了MNNG、filipin 单独处理及先用filipin再用MNNG处理情况下对人羊膜FL细胞鞘脂代谢的影响,用MALDI-TOF质谱法分析细胞鞘脂组成的变化,酶联免疫吸附法检测NF-κB通路的活化,RT-PCR法检测鞘脂代谢通路中关键酶的表达.结果表明,MNNG和filipin都可影响FL细胞鞘脂类代谢,但MNNG作用更显著.Filipin预处理可部分抑制MNNG对细胞鞘脂类代谢的影响,且能够抑制MNNG对NF-κB的活化;但filipin、MNNG单独或联合处理都不影响鞘脂代谢关键酶丝氨酸棕榈酰转移酶、酸性鞘磷脂酶和鞘磷脂合成酶在mRNA水平的表达.以上结果说明,filipin预处理会导致甲基硝基亚硝基胍引起FL细胞鞘脂代谢以及NF-κB活性的改变.而可能的机制在于,filipin破坏脂筏结构从而引起一系列信号途径的改变,而非通过改变脂类代谢关键酶的表达.     

Silicon Alleviates Cadmium Toxicity in Two Cypress Varieties by Strengthening the Exodermis Tissues and Stimulating Phenolic Exudation of Roots

The aim of this work was to investigate the effect of silicon (Si) on phenolic exudation of plant roots and cadmium (Cd) bioavailability in rhizospheres. For this purpose, pot experiments with two cypress varieties, Juniperus chinensis and Platycladus orientalis, each subjected to 100 mg kg^?1 Cd and/or 400 mg kg^?1 Si for 220 days, were conducted using a rhizobag technique. The results showed that P. orientalis accumulated a higher amount of Cd, hence caused higher growth inhibition on the leaves compared with J. chinensis. Si alleviated the growth inhibition induced by Cd toxicity on both varieties, but the mechanisms involved were species specific. For J. chinensis, Si did not affect the root exudation but enhanced the Cd retention of the roots by strengthening the exodermis tissues, restraining Cd translocation from the roots to the shoots. For P. orientalis, Si exposure significantly elevated the phenolic exudation (for example, ferulic acid, catechin, and gallic acid) of the roots, which caused greater Cd mobility in the rhizosphere and enhancement of Cd accumulation in the shoots compared with Cd treatment alone. These results suggest that Cd-chelating with the Si-induced phenolics in the rhizosphere is involved in the Cd detoxification in P. orientalis.     

Applications of Phosphorene and Black Phosphorus in Energy Conversion and Storage Devices

The successful isolation of phosphorene (atomic layer thick black phosphorus) in 2014 has currently aroused the interest of 2D material researchers. In this review, first, the fundamentals of phosphorus allotropes, phosphorene, and black phosphorus, are briefly introduced, along with their structures, properties, and synthesis methods. Second, the readers are presented with an overview of their energy applications. Particularly in electrochemical energy storage, the large interlayer spacing (0.53 nm) in phosphorene allows the intercalation/deintercalation of larger ions as compared to its graphene counterpart. Therefore, phosphorene may possess greater potential for high electrochemical performance. In addition, the status of lithium ion batteries as well as secondary sodium ion batteries is reviewed. Next, each application for energy generation, conversion, and storage is described in detail with milestones as well as the challenges. These emerging applications include supercapacitors, photovoltaic devices, water splitting, photocatalytic hydrogenation, oxygen evolution, and thermoelectric generators. Finally the fast‐growing dynamic field of phosphorene research is summarized and perspectives on future possibilities are presented calling on the efforts of chemists, physicists, and material scientists     

Rapid Evolution of Simple Sequence Repeat Induced by Allopolyploidization

Microsatellite evolution normally occurs in diploids. Until now, there has been a lack of direct experimental evidence for microsatellite evolution following allopolyploidization. In the present study, F₁ hybrids and newly synthesized allopolyploids were derived from Triticum aestivum Chinese Spring × Secale cereale Jinzhou-heimai. One hundred and sixty-three wheat simple sequence repeat (SSR) markers were used to investigate the variation of wheat microsatellites after allopolyploidization and variation of the PCR products of 29 of the SSR markers was observed. Of these 29 SSR markers, 15 were unable to produce products from amphiploids. The other 14 SSR markers did produce products from parental wheat, F₁ hybrids and amphiploids. However, the length of the products amplified from amphiploids was different from the length of the products amplified from parental wheat and F₁ hybrids. Sequencing indicated that the length variation of the 14 microsatellites stemmed mainly from variation in the number of repeat units. The alteration of repeat units occurred in both perfect and compound repeats. In some compound SSR loci, one motif was observed to expand whereas another to contract. Almost all the microsatellite evolution observed in this study could be explained by the slipped-strand mispairing model. The results of this study seem to indicate that stress caused by allopolyploidization might be one of the factors that induce microsatellite evolution. In addition, the findings of present study provided an instance of how simple sequence repeats evolved after allopolyploidization.