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901.
Worldwide patterns of mitochondrial DNA differentiation in the harbor seal (Phoca vitulina) 总被引:3,自引:0,他引:3
Stanley HF; Casey S; Carnahan JM; Goodman S; Harwood J; Wayne RK 《Molecular biology and evolution》1996,13(2):368-382
The harbor seal (Phoca vitulina) has one of the broadest geographic
distributions of any pinniped, stretching from the east Baltic, west across
the Atlantic and Pacific Oceans to southern Japan. Although individuals may
travel several hundred kilometers on annual feeding migrations, harbor
seals are generally believed to be philopatric, returning to the same areas
each year to breed. Consequently, seals from different areas are likely to
be genetically differentiated, with levels of genetic divergence increasing
with distance. Differentiation may also be caused by long-standing
topographic barriers such as the polar sea ice. We analyzed samples of 227
harbor seals from 24 localities and defined 34 genotypes based on 435 bp of
control region sequence. Phylogenetic analysis and analysis of molecular
variance showed that populations in the Atlantic and Pacific Oceans and
east and west coast populations of these oceans are significantly
differentiated. Within these four regions, populations that are
geographically farthest apart generally are the most differentiated and
often do not share genotypes or differ in genotype frequency. The average
corrected sequence divergence between populations in the Atlantic and
Pacific Oceans is 3.28% +/- 0.38% and those among populations within each
of these oceans are 0.75% +/- 0.69% and 1.19% +/- 0.65%, respectively. Our
results suggest that harbor seals are regionally philopatric, on the scale
of several hundred kilometers. However, genetic discontinuities may exist,
even between neighboring populations such as those on the Scottish and east
English coasts or the east and west Baltic. The mitochondrial data are
consistent with an ancient isolation of populations in both oceans, due to
the development of polar sea ice. In the Atlantic and Pacific, populations
appear to have been colonized from west to east with the European
populations showing the most recent common ancestry. We suggest the recent
ancestry of European seal populations may reflect recolonization from Ice
Age refugia after the last glaciation.
相似文献
902.
Volumetric growth in gammaridean Amphipoda 总被引:2,自引:2,他引:0
A non-destructive, direct volumetric method is described for measuring absolute growth rates throughout embryonic and postembryonic life of gammaridean Amphipoda. The method is demonstrated by following embryonic and early postembryonic growth of individuals from a population of Platorchestia platensis Krøyer 1844 living on a fixed shingle shore in the Bay of Fundy, Canada. 相似文献
903.
Structure and function of conjugative pili: monoclonal antibodies as probes for structural variants of F pili.
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The lac-tra operon fusion plasmid pTG801 contains the known F plasmid DNA transfer (tra) genes required by Escherichia coli to elaborate functional F pili (T. Grossman and P. M. Silverman, J. Bacteriol. 171:650-656, 1989). Here, we show that these pili are actually structural variants of normal F pili and that the F plasmid must contain additional genes that affect pilus structure and function. We confirmed a previous report that two monoclonal antibodies that recognize epitopes at and near the amino terminus of F pilin do not decorate the sides of normal F pili, as determined by immunogold electron microscopy. However, both antibodies laterally decorated pTG801 pili. The epitope for one of the antibodies has been shown to include the amino-terminal acetyl group of F pilin, which must therefore also be present on pTG801 pilin. Normal antibody staining was restored to pTG801 pili when cells contained, in addition to pTG801, the compatible plasmid pRS31, which must therefore include at least one gene affecting F-pilus structure. One candidate, traD, was excluded as the sole such gene, since traD+ derivatives of a pTG801 strain still elaborated pili that could be laterally decorated with antibody. Moreover, although traD alone restored RNA bacteriophage R17 infectivity to pTG801 cells, as expected, it did not mimic pRS31 in restoring to pTG801 pili other characteristics of normal F pili. We conclude that pRS31 contains as yet uncharacterized genes required for elaboration of structurally normal F pili. Finally, we identified vesicular material, especially abundant in cultures of pTG801 transformants, that stained heavily with the anti-F-pilin monoclonal antibodies. This material may reflect the inner membrane pool of F pilin. 相似文献
904.
D J Frost S M Read R R Drake B E Haley B P Wasserman 《The Journal of biological chemistry》1990,265(4):2162-2167
The photoaffinity probe 5-azidouridine 5'-[beta-32P]diphosphate glucose (5N3[32P]UDP-Glc) was used to identify a 57-kDa polypeptide as a strong candidate for the UDP-Glc-binding polypeptide of UDP-glucose: (1,3)-beta-glucan (callose) synthase from red beet (Beta vulgaris L.) storage tissue. Unlabeled 5N3UDP-Glc was a competitive inhibitor of callose synthase with a Ki of 310 microM. Callose synthase was purified from plasma membranes by a two-step solubilization with 3-[(3-cholamidopropyl)dimethylammonio]-1-propane-sulfonate, followed by product entrapment, and photoincorporation of radioactivity from 5N3[32P]UDP-Glc was used to identify UDP-Glc-binding polypeptides that copurified with callose synthase activity. Photoinsertion into the 57-kDa band was closely correlated with all catalytic properties examined. Photolabeling of the 57-kDa polypeptide was enriched upon purification of callose synthase by product entrapment, was abolished with increasing levels of unlabeled UDP-Glc, was dependent upon the presence of divalent cations, and the pH dependence of photolabeling correlated with the pH activity profile of callose synthase. In addition, photolabeling of the 57-kDa band did not occur after phospholipase treatment, which destroys enzyme activity. The extent of labeling of this polypeptide thus correlates closely with the activity of callose synthase under a wide variety of conditions. These results imply that the polypeptide at 57 kDa represents the substrate-binding and cation-regulated component of the callose synthase complex of higher plants. 相似文献
905.
906.
Characterization of the oriT region of the IncFV plasmid pED208 总被引:4,自引:2,他引:2
DNA sequence analysis of a 2.2kb EcoRI-HindIII fragment from pED208, the derepressed form of the IncFV plasmid Folac, revealed sequences highly homologous to the oriT region, traM, and traJ genes of other IncF plasmids. The TraM protein was purified and immunoblots of fractionated cells containing pED208 or Folac showed that TraM was predominantly in the cytoplasm. Using DNA retardation assays and the DNase I footprinting technique, the TraM protein was found to bind to three large motifs in the oriT region: (I) an inverted repeat, (II) two direct repeats, and (III) the traM promoter region. These three footprint regions contained a Hinfl-like sequence (GANTC) that appeared 16 times, spaced 11-12 bp (or multiples thereof) apart, suggesting that TraM protein binds in a complex manner over this entire region. 相似文献
907.
An unusual number of killer whales appeared in inshore waters of the southeastern Bering Sea in summer 1989 and 1990. Multiple sightings occurred in Bristol and Kuskokwim bays where killer whales had been seen only rarely in previous years. Three animals became stranded on mud flats in Kuskokwim Bay but were able to free themselves on a high tide. Killer whales were observed interacting with salmon, harbor seals, Steller sea lions, walruses, and beluga whales. Detailed observations were made of killer whales attacking belugas in the Naknek River. Local conditions and behavioral adaptations may reduce the susceptibility of belugas to killer whale predation. Continued killer whale activity in this area would be unlikely to affect fish resources, but might have some influence on beluga whales. 相似文献
908.
C S Kumar G Muthukumaran L J Frost M Noe Y H Ahn T M Mariano S Pestka 《The Journal of biological chemistry》1989,264(30):17939-17946
Interferon gamma receptors (IFN-gamma R) exhibit remarkable species specificity. In order to understand the basis for this phenomenon, we have isolated a recombinant cDNA clone corresponding to the mouse (Mu) IFN-gamma R. Microinjection of the mRNA synthesized in vitro corresponding to the cloned cDNA into Xenopus laevis oocytes resulted in the synthesis of a protein that specifically binds Mu-IFN-gamma. Analysis of murine genomic and RNA blots with the cDNA probe indicates the presence of a single gene and a single mRNA species of about 2300 bases. Sequence analysis of the cDNA encoding the Mu-IFN-gamma R and comparison with the corresponding human IFN-gamma R sequence shows about 68% conservation of the extracellular domains and 51% conservation of the cytoplasmic domains at the nucleotide level. The results indicate that, as expected, the sequence of the receptor confers species specificity for the binding of IFN-gamma to the cell surface receptor. Moreover, it was previously shown that a human factor is required in addition to the receptor for the human IFN-gamma to function in hamster or mouse cells (Jung, V., Rashidbaigi, A., Jones, C., Tischfield, J.A., Shows, T.B., and Pestka, S. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 4151-4155). These results suggest an explanation for the second species-specific event required for function of the human receptor in mouse or hamster cells in that the intracellular domains are significantly different and thus cannot interact with the corresponding heterologous factor. 相似文献
909.
Composition and molecular weight of pili purified from Pseudomonas aeruginosa K. 总被引:10,自引:0,他引:10
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Pseudomonas aeruginosa strain K (PAK) bears polar pili that promote infection by at least six bacteriophages. Moreover, a recently isolated mutant of strain K (PAK/2PfS) is many times more piliated than the wild-type strain and facilitates the preparation of large amounts of pure pili for biochemical studies. The present investigation was carried out to establish the structural relatedness of PAK and PAK/2PfS pili and to determine their biochemical composition. A purfication procedure is described for PAK and PAK/2PfS pili that yields about 8 mg of pure pili per 100 g (wet weight) of PAK/2PfS cells and 0.8 mg of pure pili per 100 g (wet weight) of PAK cells. PAK and PAK/2PfS pili were found to be free from phosphate, carbohydrate, and lipid and to contain a single polypeptide subunit of 17,800 daltons. Isopycnic centrifugation studies revealed that PAK and PAK(2PfS pili have the same buoyant density in sucrose (1.221) and CsC1 (1.295). Both types of pili banded at pH 3.9 when subjected to isoelectric focusing. Amino acid analyses showed that PAK and PAK/2PfS pili have identical amino acid compositions, whereas microimmunodiffusion studies revealed that the two types of pili are immunologically indistinguishable. It was concluded that PAK and PAK/2PfS pili are identical and that the mutation responsible for producing the multipiliated state in PAK/2PfS is probably located outside the structural gene for PAK pili. 相似文献
910.
The enzyme, xanthine dehydrogenase (XDH), has been examined in Ambystoma tigrinum nebulosum with respect to its role in pigmentation. It now seems probable that the melanoid gene (m) either codes directly for XDH or is somehow intimately connected with the normal function of this enzyme. Inhibition of XDH using the drug, allopurinol, results in animals which appear to be phenocopies of melanoid mutants as described for the Mexican axolotl (Ambystoma mexicanum). The effects of allopurinol in terms of specific pigmentary alterations were examined, and a new method for analyzing heterogeneous extracts of skin pigments (e.g., purines and pteridines) is presented. The significance of the link between XDH and melanism is discussed with emphasis on possible mechanisms of pigment induction and general applicability to biological systems. 相似文献