A similarity measure sensitive to the contribution of rare species and its use in investigation of variation in marine benthic communities

Summary We propose a new measure of similarity, the normalized expected species shared or NESS. The measure is based on the expected number of species shared between random samples of size, m, drawn from a population. The NESS measure is shown to be a generalization of Morisita's similarity and is demonstrated to be less biased than other commonly used measures. The contribution of dominant and rare species is explicit according to the sample size, m, chosen. For large m, NESS is sensitive to the less common species in the populations to be compared.The NESS measure has been used to cluster a 2-year sequence of subtidal benthic samples taken after a severe disturbance. The NESS measure is responsive to the less common species so that both a temporal progression in community recovery and seasonal variation are revealed.Contribution No. 3699 from the Woods Hole Oceanographic Institution     

5-Bromodeoxyuridine: A specific inhibitor of cytokinin-habituation in tobacco cell culture

Summary Cytokinin-habituated cells of Nicotiana tabacum L. cv. Havana 425 are able to grow in culture without added cytokinin. The thymidine analogue, 5-bromodeoxyuridine (BUdR), which selectively inhibits differentiation of animal cells, blocks expression of the cytokinin-habituated phenotype in culture. This effect is prevented by thymidine and is reversible. These findings suggest that habituation and animal cell differentiation have a common mechanism. BUdR provides a useful tool for investigating the metabolism of cell division factors and its regulation in higher plant cells.Abbreviation BUdR 5-bromodeoxyuridine - BU 5-bromouracil     

Evidence for multiple sites of ferricyanide reduction in chloroplasts

Various sites of ferricyanide reduction were studied in spinach chloroplasts. It was found that in the presence of dibromothymoquinone a fraction of ferricyanide reduction was dibromothymoquinone sensitive, implying that ferricyanide can be reduced by photosystem I as well as photosystem II. To separate ferricyanide reduction sites in photosystem II, orthophenanthroline and dichlorophenyl dimethylurea inhibitions were compared at various pH's. It was noted that at low pH ferricyanide reduction was not completely inhibited by orthophenanthroline. At high pH's, however, inhibition of ferricyanide reduction by orthophenanthroline was complete. It was found that varying concentration of orthophenanthroline at a constant pH showed different degrees of inhibition. In the study of ferricyanide reduction by photosystem II various treatments affecting plastocyanin were performed. It was found that Tween-20 or KCN treatments which inactivated plastocyanin did not completely inactivate ferricyanide reduction. These data support the conclusion that ferricyanide accepts electrons both before and after plastoquinone in photosystem II.Abbreviations DCMU 3-(3,4-dichlorophenyl)-1,1-dimethyurea - MV methyl viologen - DBMIB 2,5-dibromothymoquinone - DMBQ 2,6-dimethyl benzoquinone - OP 1,10-orthophenanthroline - TMPD tetramethyl-p-phenylenediamine - PS 1 photosystem I - PS II photosystem II - SN sucrose-sodium chloride chloroplasts Supported by NSF Grant BMS 74-19689.     

Biosystematic studies onDisporum (Liliaceae-Polygonatae)

Both the floral biology and morphometrics of two Japanese species of AsianDisporum (sectionEudisporum) are presented. These two species,D. sessile andD. smilacinum, represent extremes in both floral morphology and divergence in pollination within the section. The inverted flowers ofD. sessile have an elongate floral tube formed by the imbrication of the oblanceolate tepals. The tepal bases are modified into well developed, saccate nectaries. The stamens have rigid, vertical filaments which tightly encircle the ovary-style axis, and extrorse anthers located within a floral cavity which can accommodate a large pollinator (cross-pollination). The stigma is exserted and the depth of its cleft formation constant.D. smilacinum, in contrast, has an open, nodding campanulate flower with lanceolate tepals which have only shallow nectaries at their bases. The stamens have widely divergent filaments with versatile anthers that have laterally introrse dehiscence (wind and/or self-pollination). The depth of the stigma cleft is variable. For both species, the pattern of differential UV absorption and reflectance is similar. It is suggested on morphological grounds and by pollinator observation, thatD. sessile with a high energy flower requiring specialized visitors represents a more advanced condition than that observed inD. smilacinum, which is more generalized and primitive. Seasonal herbivore pressure on the tepal nectaries ofD. sessile is discussed in relation to its pollination.     

Characterization and structural properties of the major biliproteins of Anabaena sp.

Studies are presented of the biliproteins of Anabaena sp. This filamentous cyanobacterium contains three major biliproteins. Whereas two of these, C-phycocyanin and allophycocyanin, are common to all cyanobacteria, the third, phycoerythrocyanin (_max568nm) has hitherto not been described and its distribution among cyanobacteria appears to be limited. Anabaena variabilis and Anabaena sp. 6411 allophycocyanin, C-phycocyanin, and phycoerythrocyanin were purified to homogeneity and characterized with respect to molecular weight, isoelectric point, absorption spectrum and amino acid composition. The and subunits of each of these proteins were also purified to homogeneity and characterized in the same manner. The tetrapyrrole chromophore content was determined for each of the proteins and subunits. The subunit of phycoerythrocyanin carries a novel phycobiliviolin-like chromophore. This chromophore has not previously been detected in cyanobacterial biliproteins, but has been noted as a prosthetic group of a cryptophytan phycocyanin.Sedimentation equilibrium studies show that at pH 7.0, at protein concentrations of 0.2–0.6 mg/ml, allophycocyanin, C-phycocyanin and phycoerythrocyanin, each exists as a trimeric aggregate, ()₃, of molecular weight of approximately 105000. Structural studies of microcrystals of these three biliproteins by electron microscopy and X-ray diffraction reveal a common plan for the construction of higher assembly forms. The major building block appears to be the trimer ()₃. It is proposed that this is a dise-like structure about 3.0×12.0 nm. The individual or subunits are roughly spherical, 3 nm in diameter. Allophycocyanin trimers stack to form bundles of rods which form long needles. Both phycocyanin and phycoerythrocyanin form double dises ()₆ which are visible as ring-shaped structures by electron microscopy. The mode of assembly of the biliproteinstructures in the phycobilisome is, as yet, unknown.Abbreviation Used SDS sodium dodecyl sulfate Dedicated to Prof. Dr. Roger Y. Stanier on the occasion of his 60th birthday.     

Regulation of development in Dictyostelium discoideum: I. Initiation of the growth to development transition by amino acid starvation

Evidence is presented which indicates that amino acid starvation is the specific stimulus initiating the developmental phase of the life cycle of Dictyostelium discoideum: (i) Amoebae were washed free of complex growth medium and placed in buffer supplemented with specific nutrients; amino acids were the only nutrients that specifically inhibited the initiation of development. (ii) A partially defined growth medium allowing selective starvation for amino acids or glucose during growth is described. Amoebae initiated development only when starved for amino acids. Any effect of glucose on the primary control of the initiation of development is an indirect result of its utilization as a source of precursors for endogenously synthesized amino acids.     

Relationships between platelet and plasma monoamine oxidase,plasma dopamine-B-hydroxylase,and urinary 3-methoxy-4-hydroxy phenylglycol

The activity of dopamine-B-hydroxylase in blood has recently been demonstrated to be under genetic control and to correlate closely with urinary catecholamine excretion. The results of the present study did not demonstrate any relationship between a major catecholamine metabolite in urine, 3-methoxy-4-hydroxy phenylglycol, and dopamine-B-hydroxylase activity in plasma, monoamine oxidase activity in platelets, or monoamine oxidase activity in plasma. Differences in the origin of urinary catecholamines and urinary 3-methoxy-4-hydroxy phenyglycol may be responsible for these divergent results.     

Activity of phosphorylase in Solanum tuberosum during low temperature storage

Changes in the activity of phosphorylase were measured during storage of potatoes at + 2° when the sugar content rises rapidly and subsequently at + 10° when the accumulated sugar is converted mainly to starch. The observed changes were relatively small and could not be related to any of the components of the phosphorylase system, which was shown to be complex.