Plant species loss in an urban area (Turnhout, Belgium) from 1880 to 1999 and its environmental determinants

Information from four archival literature sources from the late 19^th century was matched to present-day plant species distribution data for the region of Turnhout (Belgium) and for 15 smaller sub-regions within this region. In the entire study area 25% of the species recorded in the late 19^th century went extinct during the 20^th century and the extinction rate doubled at the more detailed sub-region level. Binary survival-extinction data and continuous residuals from a linear regression between historical and present-day abundance categories were used to investigate underlying ecological factors of change including habitat preference, ecological amplitude and life strategy. Species increasing relative to the overall trend were generally correlated with nutrient-rich habitats while declining species were more associated with nutrient-poor situations. Generalist species have become relatively more common whilst habitat specialists have strongly declined, resulting in a flora with many ‘losers’ and a few tolerant ‘winners’. The winners are often competitive species while the losers are mainly stress-tolerating species and species with combined life strategies (e.g. SC, SR). Correlations between the decline of historically present habitats and extinction rates of related habitat specialist species show clear trends. We suggest the most important factors involved in changes in flora diversity and vegetation composition are habitat loss due to urbanization and habitat deterioration, mainly due to agricultural intensification.     

Ecological perspectives for the restoration of plant communities in European temperate forests

Simultaneously with increasing afforestation efforts in western Europe, among conservationists the consciousness is growing that protecting areas to conserve biodiversity will not be sufficient in the long term, and that also the ecological restoration of more or less severely altered areas will be necessary. The probability that recently established forest stands develop towards their ecological reference (i.e. ancient forest) depends largely on the possibility of the target species to colonize them. We focused on the colonization ability of forest plant species and particularly on so-called ancient forest plant species. Major constraints for ecological forest restoration are the spatial characteristics of the target site (isolation, shape and area), imposing dispersal limitations, and in the duration and intensity of the historical land use, leading to changes in habitat characteristics influencing recruitment probability. We reviewed the ecological literature with respect to these constraints and conclude that it takes at least a century to restore the understorey layer of recent forests, even when the target stand is adjacent to a well-developed ancient forest. Both recruitment and dispersal limitation of the target species are responsible for this. Newly established forests should therefore be situated at a minimal distance of the ancient forest source. In other cases, forest plant species will not be able to colonize the newly established forest on a measurable time scale and artificial introduction of forest plant species can be taken into consideration. The negative effects of habitat characteristics, and mainly high soil nutrient values in the recent forest stand can be mitigated by soil nutrient lowering measures. Disturbances in the recent forest should be minimized to maintain a high canopy closure level, preventing light demanding, high competitive species from establishing a stable population. An additional negative consequence of soil disturbances is that it stimulates germination of species from the soil seed bank, which is mainly composed of highly competitive or ruderal species.     

Individualistic responses of forest herb traits to environmental change

• Intraspecific trait variation (ITV; i.e. variability in mean and/or distribution of plant attribute values within species) can occur in response to multiple drivers. Environmental change and land‐use legacies could directly alter trait values within species but could also affect them indirectly through changes in vegetation cover. Increasing variability in environmental conditions could lead to more ITV, but responses might differ among species. Disentangling these drivers on ITV is necessary to accurately predict plant community responses to global change.
• We planted herb communities into forest soils with and without a recent history of agriculture. Soils were collected across temperate European regions, while the 15 selected herb species had different colonizing abilities and affinities to forest habitat. These mesocosms (384) were exposed to two‐level full‐factorial treatments of warming, nitrogen addition and illumination. We measured plant height and specific leaf area (SLA).
• For the majority of species, mean plant height increased as vegetation cover increased in response to light addition, warming and agricultural legacy. The coefficient of variation (CV) for height was larger in fast‐colonizing species. Mean SLA for vernal species increased with warming, while light addition generally decreased mean SLA for shade‐tolerant species. Interactions between treatments were not important predictors.
• Environmental change treatments influenced ITV, either via increasing vegetation cover or by affecting trait values directly. Species’ ITV was individualistic, i.e. species responded to different single resource and condition manipulations that benefited their growth in the short term. These individual responses could be important for altered community organization after a prolonged period.

     

Extrapair paternity in the blue tit (Parus caeruleus) : female choice, male charateristics, and offspring quality

Extrapair paternity is common in many birds, and it is now generallyaccepted that female choice plays an important role. However,die benefits that females obtain from extrapair paternity aremuch less dear. To test the hypothesis that females obtain indirectfitness benefits, we studied paternity in a blue tit populationover 4 years. Extrapair paternity occurred in 31-47% of allnests and accounted for 11-14% of all offspring. Most malesthat fathered extrapair young did not lose paternity themselves,males never "exchanged" paternity, and within nests the extrapairoffspring were usually fathered by a single male. Comparisonsbetween males that did and did not lose paternity and pairwisecomparisons between the extrapair male(s) and the within-pairmale showed that successful males had longer tarsi and sangon average longer strophes during the dawn chorus. Successfulmales weighed less (relative to their size) during the nettlingstage, but nevertheless they survived better. Male age did notinfluence their likelihood of losing paternity, but extrapairmales were usually older than the within-pair male they cuckolded.Within nests with mixed paternity, extrapair young were morelikely to survive than within-pair young in cases of partialbrood mortality. Our data also suggest that extrapair offspringwere more likely to be males. Because extrapair males were usuallyclose neighbors, male quality should be considered relativeto the quality of the neighbors. Despite this, we found consistencyin female choice over years. Our observations provide supportfor the hypothesis that female blue tits engage in extrapaircopulations to obtain good genes for their offspring.     

Distribution of Genes Encoding the Trypsin-Dependent Lantibiotic Ruminococcin A among Bacteria Isolated from Human Fecal Microbiota

Fourteen bacterial strains capable of producing a trypsin-dependent antimicrobial substance active against Clostridium perfringens were isolated from human fecal samples of various origins (from healthy adults and children, as well as from adults with chronic pouchitis). Identification of these strains showed that they belonged to Ruminococcus gnavus, Clostridium nexile, and Ruminococcus hansenii species or to new operational taxonomic units, all from the Clostridium coccoides phylogenetic group. In hybridization experiments with a probe specific for the structural gene encoding the trypsin-dependent lantibiotic ruminococcin A (RumA) produced by R. gnavus, seven strains gave a positive response. All of them harbored three highly conserved copies of rumA-like genes. The deduced peptide sequence was identical to or showed one amino acid difference from the hypothetical precursor of RumA. Our results indicate that the rumA-like genes have been disseminated among R. gnavus and phylogenetically related strains that can make up a significant part of the human fecal microbiota.     

Global environmental change effects on ecosystems: the importance of land‐use legacies

One of the major challenges in ecology is to predict how multiple global environmental changes will affect future ecosystem patterns (e.g. plant community composition) and processes (e.g. nutrient cycling). Here, we highlight arguments for the necessary inclusion of land‐use legacies in this endeavour. Alterations in resources and conditions engendered by previous land use, together with influences on plant community processes such as dispersal, selection, drift and speciation, have steered communities and ecosystem functions onto trajectories of change. These trajectories may be modulated by contemporary environmental changes such as climate warming and nitrogen deposition. We performed a literature review which suggests that these potential interactions have rarely been investigated. This crucial oversight is potentially due to an assumption that knowledge of the contemporary state allows accurate projection into the future. Lessons from other complex dynamic systems, and the recent recognition of the importance of previous conditions in explaining contemporary and future ecosystem properties, demand the testing of this assumption. Vegetation resurvey databases across gradients of land use and environmental change, complemented by rigorous experiments, offer a means to test for interactions between land‐use legacies and multiple environmental changes. Implementing these tests in the context of a trait‐based framework will allow biologists to synthesize compositional and functional ecosystem responses. This will further our understanding of the importance of land‐use legacies in determining future ecosystem properties, and soundly inform conservation and restoration management actions.     

Bat and bird diversity along independent gradients of latitude and tree composition in European forests

Species assemblages are shaped by local and continental-scale processes that are seldom investigated together, due to the lack of surveys along independent gradients of latitude and habitat types. Our study investigated changes in the effects of forest composition and structure on bat and bird diversity across Europe. We compared the taxonomic and functional diversity of bat and bird assemblages in 209 mature forest plots spread along gradients of forest composition and vertical structure, replicated in 6 regions spanning from the Mediterranean to the boreal biomes. Species richness and functional evenness of both bat and bird communities were affected by the interactions between latitude and forest composition and structure. Bat and bird species richness increased with broadleaved tree cover in temperate and especially in boreal regions but not in the Mediterranean where they increased with conifer abundance. Bat species richness was lower in forests with smaller trees and denser understorey only in northern regions. Bird species richness was not affected by forest structure. Bird functional evenness increased in younger and denser forests. Bat functional evenness was also influenced by interactions between latitude and understorey structure, increasing in temperate forests but decreasing in the Mediterranean. Covariation between bat and bird abundances also shifted across Europe, from negative in southern forests to positive in northern forests. Our results suggest that community assembly processes in bats and birds of European forests are predominantly driven by abundance and accessibility of feeding resources, i.e., insect prey, and their changes across both forest types and latitudes.     

Spatially combining wood production and recreation with biodiversity conservation

Pine plantations established on former heathland are common throughout Western Europe and North America. Such areas can continue to support high biodiversity values of the former heathlands in the more open areas, while simultaneously delivering ecosystem services such as wood production and recreation in the forested areas. Spatially optimizing wood harvest and recreation without threatening the biodiversity values, however, is challenging. Demand for woody biomass is increasing but other pressures on biodiversity including climate change, habitat fragmentation and air pollution are intensifying too. Strategies to spatially optimize different ecosystem services with biodiversity conservation are still underexplored in the research literature. Here we explore optimization scenarios for advancing ecosystem stewardship in a pine plantation in Belgium. Point observations of seven key indicator species were used to estimate habitat suitability using generalized linear models. Based on the habitat suitability and species’ characteristics, the spatially-explicit conservation value of different forested and open patches was determined with the help of a spatially-explicit conservation planning tool. Recreational pressure was quantified by interviewing forest managers and with automated trail counters. The impact of wood production and recreation on the conservation of the indicator species was evaluated. We found trade-offs between biodiversity conservation and both wood production and recreation, but were able to present a final scenario that combines biodiversity conservation with a restricted impact on both services. This case study illustrates that innovative forest management planning can achieve better integration of the delivery of different forest ecosystem services such as wood production and recreation with biodiversity conservation.