Contribution of endocytic motifs in the cytoplasmic tail of herpes simplex virus type 1 glycoprotein B to virus replication and cell-cell fusion

The use of endocytic pathways by viral glycoproteins is thought to play various functions during viral infection. We previously showed in transfection assays that herpes simplex virus type 1 (HSV-1) glycoprotein B (gB) is transported from the cell surface back to the trans-Golgi network (TGN) and that two motifs of gB cytoplasmic tail, YTQV and LL, function distinctly in this process. To investigate the role of each of these gB trafficking signals in HSV-1 infection, we constructed recombinant viruses in which each motif was rendered nonfunctional by alanine mutagenesis. In infected cells, wild-type gB was internalized from the cell surface and concentrated in the TGN. Disruption of YTQV abolished internalization of gB during infection, whereas disruption of LL induced accumulation of internalized gB in early recycling endosomes and impaired its return to the TGN. The growth of both recombinants was moderately diminished. Moreover, the fusion phenotype of cells infected with the gB recombinants differed from that of cells infected with the wild-type virus. Cells infected with the YTQV-mutated virus displayed reduced cell-cell fusion, whereas giant syncytia were observed in cells infected with the LL-mutated virus. Furthermore, blocking gB internalization or impairing gB recycling to the cell surface, using drugs or a transdominant negative form of Rab11, significantly reduced cell-cell fusion. These results favor a role for endocytosis in virus replication and suggest that gB intracellular trafficking is involved in the regulation of cell-cell fusion.     

Population trend over 100?years and conservation needs of breeding sandwich terns ( Sterna sandvicensis ) on the German North Sea coast

The breeding population of the sandwich tern (Sterna sandvicensis) on the German North Sea coast has undergone substantial fluctuations throughout the last 100 years. Numbers of breeding birds were fluctuating quite strongly in the first 30 years of the twentieth century. From 1930 to the mid-1950s, a relatively steady decrease occurred. A minimum was reached in 1965 with 2,243 pairs. Around 1970, numbers increased quite markedly up to the mid-1990s and reached a centurial maximum with 10,138 pairs in 1996. Most recently, the numbers have dropped to only 5,681 pairs in 2005, the lowest number over the last 30 years. Some colonies have existed over long periods, others only for short periods, with often substantial and sudden changes. The distribution at sea was studied by transect counts from ships. During the reproductive period, high totals were found between the mainland coast and the islands, up to 30 km from the outer coast/island line. The seaward extent of the sandwich tern distribution coincided quite well with the 20-m depth line. Maximum foraging ranges for single colonies were estimated to be ca. 45 km for Trischen, ca. 35 km for Norderoog and ca. 30 km for both Scharh?rn/Nigeh?rn and Juist. Overall flight ranges for all colonies were estimated at 33.8 km for 95% of the birds. Germany has a high international responsibility for the protection of this species. Only a few colonies exist every year, making this species very vulnerable to anthropogenic disturbance, pollution events and fishing activities.

COUP-TFI promotes radial migration and proper morphology of callosal projection neurons by repressing Rnd2 expression

During corticogenesis, late-born callosal projection neurons (CPNs) acquire their laminar position through glia-guided radial migration and then undergo final differentiation. However, the mechanisms controlling radial migration and final morphology of CPNs are poorly defined. Here, we show that in COUP-TFI mutant mice CPNs are correctly specified, but are delayed in reaching the cortical plate and have morphological defects during migration. Interestingly, we observed that the rate of neuronal migration to the cortical plate normally follows a low-rostral to high-caudal gradient, similar to that described for COUP-TFI. This gradient is strongly impaired in COUP-TFI(-/-) brains. Moreover, the expression of the Rho-GTPase Rnd2, a modulator of radial migration, is complementary to both these gradients and strongly increases in the absence of COUP-TFI function. We show that COUP-TFI directly represses Rnd2 expression at the post-mitotic level along the rostrocaudal axis of the neocortex. Restoring correct Rnd2 levels in COUP-TFI(-/-) brains cell-autonomously rescues neuron radial migration and morphological transitions. We also observed impairments in axonal elongation and dendritic arborization of COUP-TFI-deficient CPNs, which were rescued by lowering Rnd2 expression levels. Thus, our data demonstrate that COUP-TFI modulates late-born neuron migration and favours proper differentiation of CPNs by finely regulating Rnd2 expression levels.     

The effects of partial thiamin deficiency and oxidative stress (i.e., glyoxal and methylglyoxal) on the levels of alpha-oxoaldehyde plasma protein adducts in Fischer 344 rats

We hypothesized that in marginal thiamin deficiency intracellular alpha-oxoaldehydes form macromolecular adducts that could possibly be genotoxic in colon cells; and that in the presence of oxidative stress these effects are augmented because of decreased detoxification of these aldehydes. We have demonstrated that reduced dietary thiamin in F344 rats decreased transketolase activity and increased alpha-oxoaldehyde adduct levels. The methylglyoxal protein adduct level was not affected by oral glyoxal or methylglyoxal in the animals receiving thiamin at the control levels but was markedly increased in the animals on a thiamin-reduced diet. These observations are consistent with our suggestion that the induction of aberrant crypt foci with marginally thiamin-deficient diets may be a consequence of the formation of methylglyoxal adducts.     

Seasonal environmental changes regulate the expression of the histone variant macroH2A in an eurythermal fish

Adaptation to cold and warm conditions requires dramatic change in gene expression. The acclimatization process of the common carp Cyprinus carpio L. in its natural habitat has been used to study how organisms respond to natural environmental changes. At the cellular level, adaptation to cold condition is accompanied by a dramatic alteration in nucleolar structure and a down regulation of the expression of ribosomal genes. We show that the enrichment of condensed chromatin in winter adapted cells is not correlated with an increase of the heterochromatin marker trimethyl and monomethyl K20H4. However, the expression of the tri methyl K4 H3 and of the variant histone macroH2A is significantly increased during the winter season together with a hypermethylation of CpG residues. Taking into account the properties of macroH2A toward chromatin structure and dynamics and its role in gene repression our data suggest that the increased expression of macroH2A and the hypermethylation of DNA which occurs upon winter-acclimatization plays a major role for the reorganization of chromatin structure and the regulation of gene expression during the physiological adaptation to a colder environment.     

Interactions among flavonoids of propolis affect antibacterial activity against the honeybee pathogen Paenibacillus larvae

Propolis is derived from plant resins, collected by honeybees (Apis mellifera) and renown for its antibacterial properties. Here we test the antibacterial effects of ethanolic extracts of propolis from different origins on Paenibacillus larvae, the bacterial pathogen that causes American Foulbrood, a larval disease that can kill the honeybee colony. All tested propolis samples inhibited significantly the growth of P. larvae tested in vitro. The extracts showed major differences in the content of total flavonoids (ranging from 2.4% to 16.4%) and the total polyphenols (ranging between 23.3% and 63.2%). We found that it is not only the content of compounds in propolis, which influences the strength of antimicrobial effects but there is also a significant interaction effect among flavonoids of the propolis extracts. We propose that interaction effects among the various chemical compounds in propolis should be taken into account when considering the antibacterial effects against honeybee pathogens.     

Long-term removal of wheat straw decreases soil amorphous silica at Broadbalk, Rothamsted

Aims

Most cereals accumulate Si in their shoots. Soil bioavailability of Si may be a constraint on the beneficial role of silica in cereals but it is not yet well supported by field data. The aim of this study is to evaluate the long-term impact of wheat straw exports on the pool of soil phytoliths, which, it is suggested, represents the most labile and renewable pool of soil Si.

Methods

We measured the amorphous Si (ASi) in soils from several experiments at Rothamsted Research (UK), which provided long-term soil data back to the middle of the 19th century, using two alternative extraction techniques: Na₂CO₃ (referred to as AS_nc) or zinc bromide extraction (referred to as ASi_zb).

Results

All samples showed a similar range of AS_nc and ASi_zb but low values (0.1–3.4?mg?g^?1 DW) compared to published data on natural ecosystems. In the Broadbalk experiment, a decrease over time in ASi in the topsoil samples is in good agreement with the hypothesis that cropping and exports of straw leads to depletion of soil phytoliths. A decrease in Si concentration in straw samples was observed between 1883 and 1944. From 1944 to the present, Si concentration increased irregularly in the straw, probably as the result of liming, which enhanced the dissolution of the remaining phytoliths through increasing pH. In the reforested Geescroft field the higher phytolith concentration in the modern topsoil samples is in good agreement with a re-building of phytolith storage from litter input in an acidic environment.

Conclusions

Our results therefore support the hypothesis that export of wheat straw leads to a decrease in bioavailable Si.     

The allelopathic effects of Festuca paniculata depend on competition in subalpine grasslands

Allelopathy is recognized as an important process in plant–plant interactions, but how it affects plant communities growing in competitive conditions has not been assessed. This article investigates whether the allelopathic effect of Festuca paniculata is modified by competition between target plants in subalpine grasslands. We hypothesized that plants growing in mixed stands will be more affected by allelochemicals than the same species in monoculture. At Lautaret pass (Northern French Alps), a pot experiment was designed. We used leachates from donor pots (Treatments: 1. Bare soil, 2. F. paniculata clipped, and 3. F. paniculata unclipped) to water target pots (Treatments: 1. Control (soil only), 2. Dactylis glomerata, 3. Agrostis capillaris, and 4. D. glomerata and A. capillaris). Target plants were cultivated during one growing season. The effects of leachates from donor pots and interspecific competition in target pots were evaluated by measuring the final biomass of plants. Soil fertility was controlled in all target pots by measuring NO₃ ^?, NH₄ ⁺, N, and C % of the soil. Effect of target treatment under bare soil : Both D. glomerata and A. capillaris grew better in monocultures than in mixture. Effect of donor treatment on monocultures : Under bare soil, D. glomerata grew better than under F. paniculata leachates. By contrast, A. capillaris did not respond to donor pot treatment. Effect of donor treatment on mixtures: However, when both species were cultivated together under F. paniculata leachates, the biomass of D. glomerata was similar to that in monoculture under bare soil. Differences in sensitivity to allelopathy reversed the impact of interspecific competition: A. capillaris facilitated D. glomerata under allelopathy, which made allelopathy of F. paniculata on D. glomerata inefficient. The complexity of overlapping mechanisms of plant–plant interactions are highlighted by this semi-natural experiment. In subalpine grasslands, allelopathy not only limits the growth of neighboring plants, but it may also modify community assembly by affecting other plant–plant interactions such as competition. This study contributes to explore the way allelopathy interacts with other plant–plant interactions in natural systems.     

Deployment of self-expandable stents in aneurysmatic cerebral vessels: comparison of different computational approaches for interventional planning

In the last few years, there has been a growing focus on faster computational methods to support clinicians in planning stenting procedures. This study investigates the possibility of introducing computational approximations in modelling stent deployment in aneurysmatic cerebral vessels to achieve simulations compatible with the constraints of real clinical workflows. The release of a self-expandable stent in a simplified aneurysmatic vessel was modelled in four different initial positions. Six progressively simplified modelling approaches (based on Finite Element method and Fast Virtual Stenting--FVS) have been used. Comparing accuracy of the results, the final configuration of the stent is more affected by neglecting mechanical properties of materials (FVS) than by adopting 1D instead of 3D stent models. Nevertheless, the differences showed are acceptable compared to those achieved by considering different stent initial positions. Regarding computational costs, simulations involving 1D stent features are the only ones feasible in clinical context.