Regulation of the host response to bacterial lipopolysaccharides

Bacterial endotoxins or lipopolysaccharides (LPS) are unique glycolipids present in the outer cell membrane of all gram-negative bacteria. It is now generally recognized that LPS is of primary importance in initiating the pathophysiological changes that often accompany gram-negative bacillary infections in humans including hypotensive shock, disseminated intravascular coagulation, and metabolic abnormalities. Although the biochemical mechanisms of these changes are not well understood, increasing emphasis has been placed on defining the biochemical response of the macrophage (M phi) to LPS. In this paper we describe two M phi-derived factors induced by LPS that may be important in the expression of endotoxic activity in the host. These are a procoagulant activity, which is present on the cell membrane of LPS-treated rabbit liver M phi and acts by directly activating coagulation factor X, and a factor released into the supernatant by LPS-treated peritoneal exudate M phi, which suppresses steroidogenesis in explanted adrenocortical cells. The potential role of the M phi in regulating the binding of LPS to high-density lipoproteins through the induction of acute phase proteins is also considered.     

Ecological traits reveal functional nestedness of bird communities in habitat islands: a global survey

The widespread destruction and fragmentation of natural habitats around the world creates a strong incentive to understand how species and communities respond to such pressures. The vast majority of research into habitat fragmentation has focused solely on species presence or absence. However, analyses using innovative functional methodologies offer the prospect of providing new insights into the key questions surrounding community structure in fragmented systems. A key topic in fragmentation research is nestedness (i.e. the ordered composition of species assemblages involving a significant tendency for packing of the presence–absence matrix into a series of proper subsets). To date, nestedness analyses have been concerned solely with nestedness of species membership. Here, we capitalize on the publication of a recent nestedness index (traitNODF) in which the branch lengths of functional dendrograms are incorporated into the standard NODF nestedness index. Using bird community data from 18 forest‐habitat‐island studies, and measurements of eight continuous functional traits from over 1000 bird species, we conduct the first synthetic analysis of nestedness from a functional perspective (i.e. a nestedness analysis which incorporates how similar species are in terms of their ecological traits). We use two null models to test the significance of any observed functional nestedness, and investigate the role of habitat island area in driving functional nestedness. We also determine whether functional nestedness is driven primarily by species composition or by differences in species’ traits. We found that the majority (94%) of datasets were functionally nested by island area when a permutation null model was used, although only 11–22% of datasets were significantly functionally nested when a more conservative fixed‐fixed null model was used. Species composition was always the most important driver of functional nestedness, but the effect of differences in species traits was occasionally quite large. Our results isolate the importance of island area in driving functional nestedness where it does occur and show that habitat loss results in the ordered loss of functional traits. This analysis demonstrates the potential insights that may derive from testing for ordered patterns of functional diversity. Synthesis The widespread fragmentation of natural habitats around the world creates a strong incentive to understand how ecological communities respond to such pressures. A key topic in this research agenda is nestedness; however, to date, nestedness analyses have been concerned solely with species presence or absence. Using data from 18 bird‐habitat‐island studies we conduct the first synthetic analysis of nestedness from a functional perspective (i.e. a nestedness analysis which incorporates how similar species are in terms of their ecological traits). Our findings suggest that many bird‐habitat island communities are significantly functionally nested, although our results were sensitive to the null model used. Our study demonstrates the benefits of testing for ordered patterns of functional diversity.     

Increased nitrous oxide emissions from a drained organic forest soil after exclusion of ectomycorrhizal mycelia

The aim of this study was to determine how roots and their ectomycorrhizal symbionts affect the fluxes of nitrous oxide (N₂O) from nutrient-rich drained organic forest soils. Specifically, the relative impacts of roots and mycorrhizal mycelia on N₂O fluxes were investigated using two different trenching treatments, excluding (a) roots or (b) roots and mycorrhizal mycelia, from the soil. N₂O fluxes were measured at the soil surface, for 1 year before and 2.5 years after trenching, within the two trenching treatments and on untreated controls. While the exclusion of roots alone did not affect N₂O emissions, the simultaneous exclusion of roots and mycorrhizal mycelia doubled N₂O emissions, compared to the control plots. Two probable explanations for the increased fluxes were identified: (1) a decreased uptake of nitrogen (N) from the soil, through the mycorrhizal fungi, which increased N availability for the N₂O-producing microorganisms, and (2) a decreased uptake of water from the soil, through the mycorrhiza, which increased the soil water content and thus the N₂O emissions from denitrification. If the trenching reduced any potential stimulation of N cycling, through rhizodeposition, this mechanism did not outweigh the effects of a discontinued mycorrhizal N and/or water uptake on N₂O fluxes. The results of the study emphasise the importance of ectomycorrhiza in regulating N₂O emissions from forested organic soils.     

Elasticity and stress relaxation of a very small vocal fold

Across mammals many vocal sounds are produced by airflow induced vocal fold oscillation. We tested the hypothesis that stress-strain and stress-relaxation behavior of rat vocal folds can be used to predict the fundamental frequency range of the species' vocal repertoire. In a first approximation vocal fold oscillation has been modeled by the string model but it is not known whether this concept equally applies to large and small species. The shorter the vocal fold, the more the ideal string law may underestimate normal mode frequencies. To accommodate the very small size of the tissue specimen, a custom-built miniaturized tensile test apparatus was developed. Tissue properties of 6 male rat vocal folds were measured. Rat vocal folds demonstrated the typical linear stress-strain behavior in the low strain region and an exponential stress response at strains larger than about 40%. Approximating the rat's vocal fold oscillation with the string model suggests that fundamental frequencies up to about 6 kHz can be produced, which agrees with frequencies reported for audible rat vocalization. Individual differences and time-dependent changes in the tissue properties parallel findings in other species, and are interpreted as universal features of the laryngeal sound source.