Physical and ecological isolation contribute to maintain genetic differentiation between fire salamander subspecies

Landscape features shape patterns of gene flow among populations, ultimately determining where taxa lay along the continuum between panmixia to complete reproductive isolation. Gene flow can be restricted, leading to population differentiation in two non-exclusive ways: “physical isolation”, in which geographic distance in combination with the landscape features restricts movement of individuals promoting genetic drift, and “ecological isolation”, in which adaptive mechanisms constrain gene flow between different environments via divergent natural selection. In central Iberia, two fire salamander subspecies occur in parapatry across elevation gradients along the Iberian Central System mountains, while in the adjacent Montes de Toledo Region only one of them occurs. By integrating population and landscape genetic analyses, we show a ubiquitous role of physical isolation between and within mountain ranges, with unsuitable landscapes increasing differentiation between populations. However, across the Iberian Central System, we found strong support for a significant contribution of ecological isolation, with low genetic differentiation in environmentally homogeneous areas, but high differentiation across sharp transitions in precipitation seasonality. These patterns are consistent with a significant contribution of ecological isolation in restricting gene flow among subspecies. Overall, our results suggest that ecological divergence contributes to reduce genetic admixture, creating an opportunity for lineages to follow distinct evolutionary trajectories.Subject terms: Evolutionary ecology, Speciation     

The physiological light response of two tree species across a hydrologic gradient in Brazilian savanna (Cerrado)

Tropical savanna ecosystems are extremely diverse and important for global carbon storage. In the state of Mato Grosso, tropical savanna (locally known as the Cerrado), turns from well-drained, upland areas into seasonally flooded areas within the Pantanal; however, the Cerrado and the Pantanal share many common tree species, such as Vochysia divergens, a flood-adapted tree native to the Amazon Basin, and Curatella americana, a tree, adapted native to the welldrained the Cerrado. We measured the photosynthetic light response of these species in the the Cerrado and the Pantanal over a 1-year period to determine how these species physiologically adjust to these hydrologically distinct habitats. We hypothesized that neither species would experience a significant decline in maximum, light-saturated photosynthetic rate (P _max) in their naturalized habitat. Physiological performance of each species was generally higher in the habitat that they were adapted to; however, our data indicated that both species have broad tolerance for seasonal variations in hydrology, allowing them to tolerate seasonal drought during the dry season in the Cerrado, and seasonal flooding during the wet season in the Pantanal. In V. divergens, flexible water-use efficiency, higher specific leaf area (SLA), and a greater ability to adjust mass-based P _max (P _max,m) to variations in leaf N and P concentration appeared to be key traits for withstanding prolonged drought in the Cerrado. In C. americana, increases in SLA and higher nutrient-use efficiency appeared to be important in maintaining high rates of P _max,m in the seasonally flooded Pantanal. Flexibility in physiology and resource-use efficiency may allow these species to survive and persist in habitats with broadly differing hydrology.     

Determination of muscle protein synthesis rates in fish using H2O and H NMR analysis of alanine

Following administration of deuterated water (²H₂O), the fractional synthetic rate (FSR) of a given endogenous protein can be estimated by ²H-enrichment quantification of its alanine residues. Currently, this is measured by mass spectrometry following a derivatization procedure. Muscle FSR was measured by ¹H/²H NMR analysis of alanine from seabass kept for 6 days in 5% ²H-enriched saltwater, following acid hydrolysis and amino acid isolation by cation-exchange chromatography of muscle tissue. The analysis is simple and robust, and provides precise measurements of excess alanine ²H-enrichment in the 0.1–0.4% range from 50 mmol of alanine recovered from muscle protein.     

Predator abundance in relation to small game management in southern Portugal: conservation implications

The interaction between hunting interests and legally protected predators is often a contentious conservation problem, requiring detailed understanding of predator responses to game management. This issue was addressed in southern Portugal in a treatment-control natural experiment, whereby the abundances of small game, corvids, birds of prey and carnivores were compared in 12 game estates (>500 ha) and 12 matching areas with similar sizes and land uses but no game management. European rabbits (Oryctolagus cuniculus), Iberian hares (Lepus granatensis) and, less so, red-legged partridges (Alectoris rufa) were far more numerous in game estates than elsewhere. Among legally controlled species, there were less Eurasian jays (Garrulus glandarius) but more red foxes (Vulpes vulpes) in game estates, though the latter were primary targets of predator culling. Fox abundance within game estates varied inversely with an index of management intensity (density of small game feeding sites) and increased along with hare abundance. As for protected species, only common kestrels (Falco tinnunculus) and genets (Genetta genetta) were fewer in game estates. The abundance of raptors within game estates varied inversely with gamekeeper density, whereas that of common buzzards (Buteo buteo) increased along with rabbit abundance. Overall, there was little evidence that game management reduced local predator abundances, except in the most intensively managed estates. Game estates provided concentrations of prey that was scarce elsewhere, which may have favoured increased abundances of some predators. Further investigations are needed to find out whether high prey densities may attract predators to game estates with increased mortality risk, which may thus become population sinks for protected species.     

Not poles apart: Antarctic soil fungal communities show similarities to those of the distant Arctic

Antarctica's extreme environment and geographical isolation offers a useful platform for testing the relative roles of environmental selection and dispersal barriers influencing fungal communities. The former process should lead to convergence in community composition with other cold environments, such as those in the Arctic. Alternatively, dispersal limitations should minimise similarity between Antarctica and distant northern landmasses. Using high‐throughput sequencing, we show that Antarctica shares significantly more fungi with the Arctic, and more fungi display a bipolar distribution, than would be expected in the absence of environmental filtering. In contrast to temperate and tropical regions, there is relatively little endemism, and a strongly bimodal distribution of range sizes. Increasing southerly latitude is associated with lower endemism and communities increasingly dominated by fungi with widespread ranges. These results suggest that micro‐organisms with well‐developed dispersal capabilities can inhabit opposite poles of the Earth, and dominate extreme environments over specialised local species.     

Analysis of tissue chimerism in nude mouse brain and abdominal xenograft models of human glioblastoma multiforme: what does it tell us about the models and about glioblastoma biology and therapy?

In situ hybridization coupled to immunohistochemistry for antigens of interest allows unequivocal identification of tumor cells from reactive stroma cells and normal adjacent structures in human glioblastoma multiforme grafts transplanted into nude mice. With this methodology, we have explored the development of glioblastoma multiforme solid grafts transplanted into nude mouse brains or flanks. The brain transplants closely resembled the human situation, particularly in relation to differentiation and growth patterns. The morphological features of peritumoral reactive gliosis were similar to those observed in humans. A mouse glial stroma within the main tumor masses was also demonstrated. Kinetic studies showed that the compartment of isolated tumor cells that infiltrated host brains and the reactive gliosis constituted two cycling cell populations. Despite VEGF protein expression by tumor cells and some reactive astrocytes, the abnormally permeable microvascular beds were not hyperplastic. The observation of a non-infiltrative pattern of growth when grafts were established in host flanks demonstrated that the organ-specific environment plays a determining role in the growth and invasive properties of glioblastoma. The phylogenetic distance between man and mouse and the recipient immunoincompetence should not impose serious limitations on the use of this model for studying malignant glioma biology and therapy in vivo.