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Kathie Y Sun Daniel Oreper Sarah A Schoenrock Rachel McMullan Paola Giusti-Rodríguez Vasyl Zhabotynsky Darla R Miller Lisa M Tarantino Fernando Pardo-Manuel de Villena William Valdar 《Genetics》2021,218(1)
Female mammals are functional mosaics of their parental X-linked gene expression due to X chromosome inactivation (XCI). This process inactivates one copy of the X chromosome in each cell during embryogenesis and that state is maintained clonally through mitosis. In mice, the choice of which parental X chromosome remains active is determined by the X chromosome controlling element (Xce), which has been mapped to a 176-kb candidate interval. A series of functional Xce alleles has been characterized or inferred for classical inbred strains based on biased, or skewed, inactivation of the parental X chromosomes in crosses between strains. To further explore the function structure basis and location of the Xce, we measured allele-specific expression of X-linked genes in a large population of F1 females generated from Collaborative Cross (CC) strains. Using published sequence data and applying a Bayesian “Pólya urn” model of XCI skew, we report two major findings. First, inter-individual variability in XCI suggests mouse epiblasts contain on average 20–30 cells contributing to brain. Second, CC founder strain NOD/ShiLtJ has a novel and unique functional allele, Xceg, that is the weakest in the Xce allelic series. Despite phylogenetic analysis confirming that NOD/ShiLtJ carries a haplotype almost identical to the well-characterized C57BL/6J (Xceb), we observed unexpected patterns of XCI skewing in females carrying the NOD/ShiLtJ haplotype within the Xce. Copy number variation is common at the Xce locus and we conclude that the observed allelic series is a product of independent and recurring duplications shared between weak Xce alleles. 相似文献
126.
de Sousa Karolini Tenffen Deniz Matheus Moro Matheus Fernando Gomes Isabelle Cordova do Vale Marcos Martinez Dittrich João Ricardo 《International journal of biometeorology》2021,65(10):1781-1786
International Journal of Biometeorology - Lying behavior is an important indicator of the cows’ welfare and health. In this study, we evaluate the effect of the physical environment on dairy... 相似文献
127.
Nunes Moisés Ubiratã Schmitz Cardoso Olímpio Rafael Soeth Marcelo Silvano Renato Azevedo Matias Fávaro Luís Fernando 《Hydrobiologia》2021,848(4):929-942
Hydrobiologia - Fishers’ ecological knowledge (FEK) has contributed to a better understanding about the reproduction of fishery resources, especially where biological data are scarce or... 相似文献
128.
Hydrobiologia - This study aimed to address the Ophiothela species distribution worldwide, report invasive populations, and investigate their association with benthic organisms through an... 相似文献
129.
Kathryn A. Ayres James T. Ketchum Rogelio González-Armas Felipe Galván-Magaña Alex Hearn Fernando R. Elorriaga-Verplancken Edgar M. Hoyos-Padilla Stephen M. Kajiura 《Journal of fish biology》2021,99(5):1735-1740
Cabo Pulmo National Park was established in 1995 and has since seen a large increase in fish biomass. An unoccupied aerial vehicle (UAV) was used to survey shallow coastal habitat in which lemon sharks (Negaprion brevirostris), bull sharks (Carcharhinus leucas) and Pacific nurse sharks (Ginglymostoma unami) were recorded. Sharks were more common in the afternoon, potentially using warmer shallow areas to behaviourally thermoregulate. This study highlights UAV surveying to be a viable tool for species identification, a limitation of previous terrestrial surveys conducted in the area. 相似文献
130.
Amanda Santos Gusmão Lucas Silva Abreu Josean Fechine Tavares Humberto Fonseca de Freitas Samuel Silva da Rocha Pita Elda Gonçalves dos Santos Ivo Santana Caldas André Alexandre Vieira Eliane Oliveira Silva 《化学与生物多样性》2021,18(10):e2100493
Hundreds of millions of people worldwide are affected by Chagas’ disease caused by Trypanosoma cruzi. Since the current treatment lack efficacy, specificity, and suffers from several side-effects, novel therapeutics are mandatory. Natural products from endophytic fungi have been useful sources of lead compounds. In this study, three lactones isolated from an endophytic strain culture were in silico evaluated for rational guidance of their bioassay screening. All lactones displayed in vitro activity against T. cruzi epimastigote and trypomastigote forms. Notably, the IC50 values of (+)-phomolactone were lower than benznidazole (0.86 vs. 30.78 μM against epimastigotes and 0.41 vs. 4.88 μM against trypomastigotes). Target-based studies suggested that lactones displayed their trypanocidal activities due to T. cruzi glyceraldehyde-3-phosphate dehydrogenase (TcGAPDH) inhibition, and the binding free energy for all three TcGAPDH-lactone complexes suggested that (+)-phomolactone has a lower score value (−3.38), corroborating with IC50 assays. These results highlight the potential of these lactones for further anti-T. cruzi drug development. 相似文献