On‐the‐fly detection of changes on and below the surface in epithelium mucosal tissue architecture from scattered light

In this paper we present a technique to raise a flag on the fly when a transition occurs between different mucosal architectures on or below the surface. The segmentation is based on a novel difference metric for detecting an abrupt change in the parameters extracted from a Stochastic Decomposition Method (SDM) that models the scattered light reflected from the mucosal tissue structure over an area (2‐D scan) illuminated by an optical sensor (fiber) emitting light at either one wavelength or with white light. This work has the potential to enhance the endoscopist's ability to locate and identify abnormal mucosal architectures in particular when the disease is developing below the surface and hence becoming hidden during colonoscopy or endoscopic examination. It also has also potential in helping deciding as to when and where to take biopsies; steps that should lead to improvement in the diagnostic yield. (© 2011 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Does the western Irish Sea gyre influence the distribution of pelagic juvenile fish?

The western Irish Sea is an important spawning and nursery ground for many commercially exploited fish. Spawning begins in the Irish coastal regions in early spring, and moves offshore as the season develops. As a result of the onset of seasonal heating in spring, stratification isolates a dome of cold bottom winter water in the deep (>100 m) basin of the western Irish Sea. The resultant density fields drive a cyclonic gyre which dominates the circulation of the region during late spring and summer and is characterized by anticlockwise current speeds which exceed 0.2 ms^–1, after removal of tides. Surveys of pelagic juvenile (0-group) fish in 1994, 1995 and 1996, showed that they were coincident with the centre of the gyre. Physical data from 1994 and 1995, were used to describe the horizontal and vertical structure of the water column and the associated circulation regime. The behaviour and swimming speeds of pelagic juvenile fish were insufficient to explain their apparent shift in abundance away from the coast to the central western Irish Sea. Drifter and current data suggested that their entrainment into the gyre could provide both the transport and retention mechanisms.