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41.
The problem of constrained workflow scheduling on heterogeneous computing systems has been of major interest in the recent years. The user requirements are described by defining constraints on the workflow makespan and/or its execution cost. The uncertainty in the activity execution path and the dynamicity in the resource workload may cause some run-time changes of the makespan or cost. To prohibit run-time constraint violation, the system needs robust schedules. In this paper, probability of violation (POV) of constraints is proposed as a criterion for the schedule robustness. An ant colony system is then used to minimize an aggregation of violation of constraints and the POV. Simulation results on real world workflows show the effectiveness of the proposed method in finding feasible schedules. The results also indicate that the proposed method decreases the POV, as well as the expected penalty at run-time. 相似文献
42.
The molecular behavior of a single β‐amyloid inside a dipalmitoylphosphatidylcholine bilayer at three different temperatures: An atomistic simulation study: Aβ interaction with DPPC: Atomistic simulation
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The behavior of a single Aβ40 molecule within a dipalmitoylphosphatidylcholine (DPPC) bilayer was studied by all‐atom molecular dynamics simulations. The effect of membrane structure was investigated on Aβ40 behavior, secondary structure, and insertion depth. Simulations were performed at three temperatures (323, 310, and 300 K) to probe three different bilayer fluidities. Results show that at all above temperatures, the peptide contains two short helices, coil, bend, and turn structures. At 300 K, the peptide contains a region with β structure in C‐terminal region. Our results also show that Aβ decreases the bilayer thickness and the order of lipids in its vicinity which leads to water insertion into the bilayer and concomitant increase in the local fluidity. The peptide remains embedded in the bilayer at all temperatures, and become inserted into the bilayer up to several residues at 323 and 310 K. At 310 and 300 K, the dominant interaction energy between Aβ and bilayer changes from electrostatic to van der Waals. It can be proposed that at higher temperatures (e.g., 323 K), Lys28 and the C‐terminal region of the peptide play the role of two anchors that keep Aβ inside the top leaflet. This study demonstrates that Aβ molecule can perturb the integrity of cellular membranes. Proteins 2017; 85:1298–1310. © 2017 Wiley Periodicals, Inc. 相似文献
43.
Mixed Phase Solid‐State Plastic Crystal Electrolytes Based on a Phosphonium Cation for Sodium Devices
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Faezeh Makhlooghiazad Daniel Gunzelmann Matthias Hilder Douglas R. MacFarlane Michel Armand Patrick C. Howlett Maria Forsyth 《Liver Transplantation》2017,7(2)
Na batteries are seen as a feasible alternative technology to lithium ion batteries due to the greater abundance of sodium and potentially similar electrochemical behavior. In this work, mixed phase electrolyte materials based on solid‐state compositions of a tri methylisobutylphosphonium (P111i4) bis(tri fluromethanesulphonyl)amide (NTf2) organic ionic plastic crystal (OIPC) and high concentration of NaNTf2 that support safe, sodium metal electrochemistry are demonstrated. A Na symmetric cell can be cycled efficiently, even in the solid state (at 50 °C and 60 °C), for a 25 mol% (P111i4NTf2)–75 mol% NaNTf2 composition at 0.1 mA cm?2 for 100 cycles. Thus, these mixed phase materials can be potentially used in Na‐based devices under moderate temperature conditions. It is also investigated that the phase behavior, conductivity, and electrochemical properties of mixtures of NaNTf2 with this OIPC. It is observed that these mixtures have complex phase behavior. For high compositions of the Na salt, the materials are solid at room temperature and retain a soft solid consistency even at 50 °C with remarkably high conductivity, approaching that of the pure ionic liquid at 50 °C, i.e., 10?3–10?2 S cm?1. 相似文献
44.
Nena Nwachuku Charles P. Gerba Amy Oswald Faezeh D. Mashadi 《Applied microbiology》2005,71(9):5633-5636
The results of this study confirm that adenoviruses are the most resistant enteric viruses to inactivation by UV light and that adenovirus 40 appears to be the most resistant. The effect of freeze-thawing and storage in water may affect the sensitivity of some adenoviruses to inactivation by UV light. 相似文献
45.
Vahid Molla Kazemiha Mohammad Ali Shokrgozar Mohammad Reza Arabestani Morteza Shojaei Moghadam Shahram Azari Susan Maleki Amir Amanzadeh Mahmood Jeddi Tehrani Fazel Shokri 《Cytotechnology》2009,61(3):117-124
A total of 200 cell lines including different human, monkey, mice, hamster and rat cell types were examined for mycoplasma
infection status. PCR assay using generic-specific universal primers showed that 40 (20%) of the cell lines are contaminated
with mycoplasma. Employment of species-specific primers within these infected cell lines revealed infection with M. hyorhinis (42.5%), M. fermentas (37.5%), M. arginini (37.5%), M. orale (12.5%) and A. laidlawii (7.5%). A number of the cultures were coinfected with 2 or 3 different species. Contaminated samples were treated with BM-Cyclin,
Ciprofloxacin and mycoplasma removal agent (MRA). Mycoplasma eradication was subsequently checked by PCR following 2 weeks
continuous culture of treated cells in antibiotic free culture medium. Mycoplasmal infections were eradicated in 100, 70 and
42% of infected cell lines when the samples were treated with BM-Cyclin, MRA and Ciprofloxacin, respectively. However, 12%
(BM-Cyclin), 62.5% (MRA) and 82.5% (Ciprofloxacin) of mycoplasma regrowth was observed 4 months after the treatment. Notably,
the risk of spontaneous culture death was 17.5, 12.5 and 0% for BM-Cyclin, MRA and Ciprofloxacin, respectively. 相似文献
46.
Zahra Razaghi Moghadam Kashani Hayedeh Ahrabian Elahe Elahi Abbas Nowzari-Dalini Elnaz Saberi Ansari Sahar Asadi Shahin Mohammadi Falk Schreiber Ali Masoudi-Nejad 《BMC bioinformatics》2009,10(1):318
Background
Complex networks are studied across many fields of science and are particularly important to understand biological processes. Motifs in networks are small connected sub-graphs that occur significantly in higher frequencies than in random networks. They have recently gathered much attention as a useful concept to uncover structural design principles of complex networks. Existing algorithms for finding network motifs are extremely costly in CPU time and memory consumption and have practically restrictions on the size of motifs. 相似文献47.
Moghadam M Nasr-Esfahani M Tangestaninejad S Mirkhani V 《Bioorganic & medicinal chemistry letters》2006,16(7):2026-2030
Mild and efficient oxidation of Hantzsch 1,4-dihydropyridines with sodium periodate catalyzed by Mn(TTP)Cl supported on polystyrene-bound imidazole is reported. This heterogeneous catalyst is of great stability and reusability in the oxidation of 1,4-dihydropyridines with sodium periodate without significant loss of its catalytic activity. 相似文献
48.
Vahidi B Fatouraee N Imanparast A Moghadam AN 《Journal of biomechanical engineering》2011,133(3):031004
Ureteral peristaltic mechanism facilitates urine transport from the kidney to the bladder. Numerical analysis of the peristaltic flow in the ureter aims to further our understanding of the reflux phenomenon and other ureteral abnormalities. Fluid-structure interaction (FSI) plays an important role in accuracy of this approach and the arbitrary Lagrangian-Eulerian (ALE) formulation is a strong method to analyze the coupled fluid-structure interaction between the compliant wall and the surrounding fluid. This formulation, however, was not used in previous studies of peristalsis in living organisms. In the present investigation, a numerical simulation is introduced and solved through ALE formulation to perform the ureteral flow and stress analysis. The incompressible Navier-Stokes equations are used as the governing equations for the fluid, and a linear elastic model is utilized for the compliant wall. The wall stimulation is modeled by nonlinear contact analysis using a rigid contact surface since an appropriate model for simulation of ureteral peristalsis needs to contain cell-to-cell wall stimulation. In contrast to previous studies, the wall displacements are not predetermined in the presented model of this finite-length compliant tube, neither the peristalsis needs to be periodic. Moreover, the temporal changes of ureteral wall intraluminal shear stress during peristalsis are included in our study. Iterative computing of two-way coupling is used to solve the governing equations. Two phases of nonperistaltic and peristaltic transport of urine in the ureter are discussed. Results are obtained following an analysis of the effects of the ureteral wall compliance, the pressure difference between the ureteral inlet and outlet, the maximum height of the contraction wave, the contraction wave velocity, and the number of contraction waves on the ureteral outlet flow. The results indicate that the proximal part of the ureter is prone to a higher shear stress during peristalsis compared with its middle and distal parts. It is also shown that the peristalsis is more efficient as the maximum height of the contraction wave increases. Finally, it is concluded that improper function of ureteropelvic junction results in the passage of part of urine back flow even in the case of slow start-up of the peristaltic contraction wave. 相似文献
49.
Nazanin Haghighat Parviz Abdolmaleki Faezeh Ghanati Mehrdad Behmanesh Atefeh Payez 《Journal of plant physiology》2014
The effects of a static magnetic field (SMF) and high natural radioactivity (HR) on catalase and MAPK genes in Vicia faba were investigated. Soil samples with high natural radioactivity were collected from Ramsar in north Iran where the annual radiation absorbed dose from background radiation is higher than 20 mSv/year. The specific activity of the radionuclides of 232Th, 236Ra, and 40K was measured using gamma spectrometry. The seeds were planted either in the soil with high natural radioactivity or in the control soils and were then exposed to a SMF of 30 mT for 8 days; 8 h/day. Levels of expression of catalase and MAPK genes, catalase activity and H2O2 content were evaluated. The results demonstrated significant differences in the expression of catalase and MAPK genes in SMF- and HR-treated plants compared to the controls. An increase in catalase activity was accompanied by increased expression of its gene and accumulation of H2O2. Relative expression of the MAPK gene in treated plants, however, was lower than those of the controls. The results suggest that the response of V. faba plants to SMF and HR may be mediated by modification of catalase and MAPK. 相似文献
50.
Madhurima Dhara Antonio Yarzagaray Yvonne Schwarz Soumyajit Dutta Chad Grabner Paanteha K. Moghadam Anneka Bost Claudia Schirra Jens Rettig Kerstin Reim Nils Brose Ralf Mohrmann Dieter Bruns 《The Journal of cell biology》2014,204(7):1123-1140
ComplexinII (CpxII) and SynaptotagminI (SytI) have been implicated in regulating the function of SNARE proteins in exocytosis, but their precise mode of action and potential interplay have remained unknown. In this paper, we show that CpxII increases Ca2+-triggered vesicle exocytosis and accelerates its secretory rates, providing two independent, but synergistic, functions to enhance synchronous secretion. Specifically, we demonstrate that the C-terminal domain of CpxII increases the pool of primed vesicles by hindering premature exocytosis at submicromolar Ca2+ concentrations, whereas the N-terminal domain shortens the secretory delay and accelerates the kinetics of Ca2+-triggered exocytosis by increasing the Ca2+ affinity of synchronous secretion. With its C terminus, CpxII attenuates fluctuations of the early fusion pore and slows its expansion but is functionally antagonized by SytI, enabling rapid transmitter discharge from single vesicles. Thus, our results illustrate how key features of CpxII, SytI, and their interplay transform the constitutively active SNARE-mediated fusion mechanism into a highly synchronized, Ca2+-triggered release apparatus. 相似文献