社会水文学研究进展

社会水文学是水文学和自然、社会、人文的交叉学科,主要探究人-水耦合系统的双向互馈方式及其协同进化的动态机理,并着力解决当今人类所面临的水资源可持续利用等问题.本文从社会水文学的产生背景与形成过程入手,介绍了社会水文学的基本概念,总结了其学科特点;从人-水耦合系统中的权衡、水资源管理中的利益关系、人-水耦合系统中的虚拟水研究三方面论述了社会水文学的主要研究内容,并辨析了其与传统水文学、生态水文学和水文社会学的区别与联系;最后从完善学科内容、深化定量研究、注重社会水文学中的尺度研究、社会水文学与生态水文学的融合等方面对社会水文学的发展前景进行了展望,以期推动我国社会水文学研究的发展.     

中国野生动物调查存在的问题与改进建议

一百余年前,人类就开始了相对系统的野生动物调查。目前已经建立了成熟的方法体系,并制定了相应的调查规范。最近几十年来,我国科研人员进行了大量的野生动物调查。但是,当前我国的野外调查规范还不够细致,调查者在调查时缺乏必要的约束,导致调查数据不规范、不可靠,很多重要信息缺失。突出问题有：样线信息不全,只有起点和终点的经纬度,没有自动记录的详细样线信息（如每秒记录一次的连续点位信息,含经纬度和时间）;动物位点信息缺乏可信度指标（如距观测者的距离）;调查时间不合理;调查地点的空间取样不均衡;记录的标准化不够（如每个观测点的观测时长不确定）等等。对此,我们参考国际通用的调查规范,提出了一些简单易行的调查要点,以便提高野外调查数据的质量。另外,我们提倡野外记录的无纸化,充分利用现有的手机应用软件（APP）和模型工具提高野外记录以及后期数据处理的效率。最后,我们提议建立固定的中国生物多样性监测样线体系,以便消除每年调查时空间取样的不确定性,更好地量化野生动物的时间动态,为野生动物的保护和管理提供依据。     

麻蝇和丽蝇幼虫肠道主要蛋白酶活性鉴定

蛋白酶是昆虫肠道的重要消化酶类［１］。研究表明,蛋白酶抑制剂能够抑制昆虫肠道蛋白酶活性,使昆虫生长发育不良甚至死亡,在害虫防治中显示出应用潜力［２～４］。但是,要选择有效的蛋白酶抑制剂,最首要的工作是研究昆虫肠道蛋白酶的特性［５］。蝇类是重要的卫生害虫,确定其肠道蛋白酶的类型,了解其肠道蛋白酶的特性,对蝇类的防治有重要意义。本文以棕尾别麻蝇Ｂｏｅｔｔｃｈｅｒｉｓｃａｐｅｒｅｇｒｉｎａ和巨尾阿丽蝇Ａｌｄｒｉｃｈｉｎａｇｒａｈａｍｉ为材料,分析了其肠道蛋白酶同工酶,鉴定了其肠道主要蛋白酶活性类型,并…     

啤酒抗日光嗅味的研究

啤酒中的３－甲基－２－丁烯－１－硫醇是由光照产生的。减少光照或减少其胶驱物质的产生是降低啤酒日光嗅味的有效途径。酵母和核黄素在ＭＢＴ的形成过程中起到关键作用同,还原酒花苦味物质能从根本上解决啤酒的日光嗅味。     

Spindlin1, a novel nuclear protein with a role in the transformation of NIH3T3 cells

spindlin1, a novel human gene recently isolated by our laboratory, is highly homologous to mouse spindlin gene. In this study, we cloned cDNA full-length of this novel gene and send it to GenBank database as spindlin1 (Homo sapiens spindlin1) with Accession No. AF317228. In order to investigate the function of spindlin1, we studied further the subcellular localization of Spindlin1 protein and the effects of spindlin1 overexpression in NIH3T3 cells. The results showed that the fusion protein pEGFP-N1-spindlin1 was located in the nucleus and the C-terminal is correlated with nuclear localization of Spindlin1 protein. NIH3T3 cells which could stably express spindlin1 as a result of RT-PCR analysis compared with the control cells displayed a complete morphological change; made cell growth faster; and increased the percentage of cells in G2/M and S phase. Furthermore, overexpressed spindlin1 cells formed colonies in soft agar in vitro and formed tumors in nude mice. Our findings provide direct evidence that spindlin1 gene may contribute to tumorigenesis.     

趋磁细菌多样性与应用研究进展 *

趋磁细菌是一类可以沿磁场方向进行运动的微生物统称,在细胞内合成由生物膜包被、链状排列、纳米级、单磁畴的磁铁矿 (Fe₃O₄) 或胶黄铁矿 (Fe₃S₄) 的磁小体颗粒。趋磁细菌在自然界分布广泛且多样性丰富,不仅在水环境和沉积环境的铁、硫、碳、氮、磷等元素生物地球化学循环中发挥重要作用,而且在污染治理、疾病诊断和治疗等方面有较好的应用。趋磁细菌磁小体由生物膜包被并在细胞调控下合成,是一类新型的生物源磁性纳米材料。相比常规化学合成的磁性纳米颗粒,磁小体具有大小均一、生物相容性高、兼具化学修饰和基因工程修饰功能等特点,在磁性分离、固定化酶、食品检测、环境监测、医学诊断、磁共振成像、磁热疗和靶向治疗等方面具有广阔的应用前景。在介绍趋磁细菌多样性研究的基础上,综述了趋磁细菌和磁小体的制备、修饰及其应用的最新进展,并对未来的研究进行了展望。     

Combining evolutionary and structural information for local protein structure prediction

We study the effects of various factors in representing and combining evolutionary and structural information for local protein structural prediction based on fragment selection. We prepare databases of fragments from a set of non-redundant protein domains. For each fragment, evolutionary information is derived from homologous sequences and represented as estimated effective counts and frequencies of amino acids (evolutionary frequencies) at each position. Position-specific amino acid preferences called structural frequencies are derived from statistical analysis of discrete local structural environments in database structures. Our method for local structure prediction is based on ranking and selecting database fragments that are most similar to a target fragment. Using secondary structure type as a local structural property, we test our method in a number of settings. The major findings are: (1) the COMPASS-type scoring function for fragment similarity comparison gives better prediction accuracy than three other tested scoring functions for profile-profile comparison. We show that the COMPASS-type scoring function can be derived both in the probabilistic framework and in the framework of statistical potentials. (2) Using the evolutionary frequencies of database fragments gives better prediction accuracy than using structural frequencies. (3) Finer definition of local environments, such as including more side-chain solvent accessibility classes and considering the backbone conformations of neighboring residues, gives increasingly better prediction accuracy using structural frequencies. (4) Combining evolutionary and structural frequencies of database fragments, either in a linear fashion or using a pseudocount mixture formula, results in improvement of prediction accuracy. Combination at the log-odds score level is not as effective as combination at the frequency level. This suggests that there might be better ways of combining sequence and structural information than the commonly used linear combination of log-odds scores. Our method of fragment selection and frequency combination gives reasonable results of secondary structure prediction tested on 56 CASP5 targets (average SOV score 0.77), suggesting that it is a valid method for local protein structure prediction. Mixture of predicted structural frequencies and evolutionary frequencies improve the quality of local profile-to-profile alignment by COMPASS.     

Human epidermal growth factor receptor bispecific ligand trap RB200: abrogation of collagen-induced arthritis in combination with tumour necrosis factor blockade

Introduction  

Rheumatoid arthritis (RA) is a chronic disease associated with inflammation and destruction of bone and cartilage. Although inhibition of TNFα is widely used to treat RA, a significant number of patients do not respond to TNFα blockade, and therefore there is a compelling need to continue to identify alternative therapeutic strategies for treating chronic inflammatory diseases such as RA. The anti-epidermal growth factor (anti-EGF) receptor antibody trastuzumab has revolutionised the treatment of patients with EGF receptor-positive breast cancer. Expression of EGF ligands and receptors (known as HER) has also been documented in RA. The highly unique compound RB200 is a bispecific ligand trap that is composed of full-length extracellular domains of HER1 and HER3 EGF receptors. Because of its pan-HER specificity, RB200 inhibits responses mediated by HER1, HER2 and HER3 in vitro and in vivo. The objective of this study was to assess the effect of RB200 combined with TNF blockade in a murine collagen-induced arthritis (CIA) model of RA.