Chromosomal deletions and inversions mediated by TALENs and CRISPR/Cas in zebrafish

Customized TALENs and Cas9/gRNAs have been used for targeted mutagenesis in zebrafish to induce indels into protein-coding genes. However, indels are usually not sufficient to disrupt the function of non-coding genes, gene clusters or regulatory sequences, whereas large genomic deletions or inversions are more desirable for this purpose. By injecting two pairs of TALEN mRNAs or two gRNAs together with Cas9 mRNA targeting distal DNA sites of the same chromosome, we obtained predictable genomic deletions or inversions with sizes ranging from several hundred bases to nearly 1 Mb. We have successfully achieved this type of modifications for 11 chromosomal loci by TALENs and 2 by Cas9/gRNAs with different combinations of gRNA pairs, including clusters of miRNA and protein-coding genes. Seven of eight TALEN-targeted lines transmitted the deletions and one transmitted the inversion through germ line. Our findings indicate that both TALENs and Cas9/gRNAs can be used as an efficient tool to engineer genomes to achieve large deletions or inversions, including fragments covering multiple genes and non-coding sequences. To facilitate the analyses and application of existing ZFN, TALEN and CRISPR/Cas data, we have updated our EENdb database to provide a chromosomal view of all reported engineered endonucleases targeting human and zebrafish genomes.     

Blockage of glucocorticoid receptors during memory acquisition, retrieval and reconsolidation prevents the expression of morphine-induced conditioned place preferences in mice

Association between the reward caused by consuming drugs and the context in which they are consumed is essential in the formation of morphine-induced conditioned place preference (CPP). Glucocorticoid receptor (GRs) activation in different regions of the brain affects reward-based reinforcement and memory processing. A wide array of studies have demonstrated that blockage of GRs in some brain areas can have an effect on reward-related memory; however, to date there have been no systematic studies about the involvement of glucocorticoids (GCs) in morphine-related reward memory. Here, we used the GR antagonist RU38486 to investigate how GRs blockage affects the sensitization and CPP behavior during different phases of reward memory included acquisition, retrieval and reconsolidation. Interestingly, our results showed RU38486 has the ability to impair the acquisition, retrieval and reconsolidation of reward-based memory in CPP and sensitization behavior. But RU38486 by itself cannot induce CPP or conditioned place aversion (CPA) behavior. Our data provide a much more complete picture of the potential effects that glucocorticoids have on the reward memory of different phases and inhibit the sensitization behavior.     

A convenient synthesis of GDP-d-rhamnose: The donor substrate for d-rhamnosyltransferase WbpZ from Pseudomonas aeruginosa PAO1

Gram negative bacteria have lipopolysaccharides (LPS) that are critical for their survival. LPS molecules are composed of antigenic exopolysaccharide chains (O antigens). We are interested in discovering the enzymes involved in the biosynthesis of O antigens in Pseudomonas aeruginosa. The common polysaccharide antigen contains α-linked d-rhamnose residues. We have now synthesized GDP-d-rhamnose by a convenient synthesis in aqueous solution, and have shown that it can be used without extensive purification as the donor substrate for d-rhamnosyltransferase (WbpZ) from the P. aeruginosa strain PAO1. The availability of this nucleotide sugar preparation allows for characterization of d-rhamnosyltransferases.     

桥弯藻科和异极藻科（硅藻门）植物中国7种新记录

对采自黑龙江省东南部兴凯湖湿地的100余号硅藻标本进行分类研究,共发现桥弯藻科、异极藻科（硅藻门）中国新记录植物5种2变种,分别为亚粗糙桥弯藻（Cymbella peraspera Krammer）、尖头弯肋藻［Cymbopleura cuspidata (Kützing) Krammer］、不显内丝藻高山变种（Encyonema obscurum var.alpina Krammer）、西里西亚内丝藻翼形变种（Encyonema silesiacum var.lata Krammer）、耳状异极藻（Gomphonema auritum Braun & Kützing）、棍棒异极藻（Gomphonema clava Reichardt）、极细异极藻［Gomphonema exilissimum (Grunow) Lange-Bertalot & Reichardt］。对其分类学特征进行了详细的描述,与同属中相似的种类进行了比较与讨论,为今后该区域的藻类研究提供了基础的资料。     

采收期对青皮核桃果实生理特性与耐贮性的影响

以‘中林5号’(早熟)、‘辽宁4号’(中熟)、‘西扶1号’(中晚熟)青皮核桃果实为试材,于8月上、中、下旬3个采收期采果,在0~1℃冷藏过程中测定贮期生理指标和保鲜效应。结果显示:(1)各采收期和各品种果实呼吸强度(RI)均呈双峰型变化;8月中旬采收的果实呼吸峰出现较早,其纤维素酶(Cx)活性较另2个采收期多1个高峰;多聚半乳糖醛酸酶(PG)活性增强最早,其贮后核仁酸价上升幅度最大,果实腐烂最快。(2)8月下旬同期采收的3个品种果实的贮期各生理指标变化趋于一致;贮藏54d时,果实腐烂率依次为‘辽宁4号’>‘中林5号’>‘西扶1号’。(3)‘辽宁4号’核仁可溶性蛋白质含量越高,贮后下降率最大。研究表明,青皮核桃果实采后生理代谢活性与耐贮性主要与采收时期有关,受品种影响较小,且8月中旬采收的果实采后生理代谢旺盛,耐贮藏性均最差;‘辽宁4号’果实在各采收期的耐贮性均小于其他品种果实。