Detection of Endogenous Matrix Metalloprotease-12 Active Form with a Novel Broad Spectrum Activity-based Probe

Matrix metalloproteases (MMPs) have attracted considerable attention as critical mediators of pathological tissue remodeling processes. However it remains an unresolved challenge to detect their active forms in biological samples. To prove the efficacy of a recently developed MMP activity-based probe, we examined the content in MMP active forms of bronchoalveolar lavage fluids (BALf) from male C57BL/6 mice exposed to ultrafine carbon black nanoparticles, a model of chronic obstructive pulmonary disease. This probe was shown to label proteins, mostly expressed in BALf of mice exposed to nanoparticles. Using competition assays with a selective MMP-12 inhibitor as well as MMP-12 knock-out mice, one of these proteins was identified as the active form of the catalytic domain of MMP-12. This new probe can detect the active form of MMP-12 down to a threshold of 1 fmol. Radioactive counting showed the concentration of the active form of MMP-12 to be around 1 fmol/μl in BALf from nanoparticle-treated mice. A less sensitive probe would therefore not have detected MMP-12. As the probe can detect other MMPs in the femtomolar range, it is a potentially powerful tool for monitoring the levels of MMP active forms in various diseases.     

Age-related changes in antioxidant defence mechanisms and peroxidation in isolated hepatocytes from spontaneously hypertensive and normotensive rats

The effects of age and hypertension on the antioxidant defence systems and the lipid peroxidation in rat isolated hepatocytes were studied. Four different age groups (1,3,6 and 12 months) were considered in spontaneously hypertensive rats (SHR) and normotensive Wistar-Kyoto (WKY) rats. Age-associated changes were observed on vitamin E status, glutathione (GSH) level, MDA formation and glutathione peroxidase (GSH-Px) activity in both strains. Maximal levels or activities of these parameters were found at 3 and 6 months, except for MDA which was low at 3 months. Then, a fall was observed at 12-month-old compared to 6-month values. In addition, GSH-Px activity was significantly lower in SHR than in WKY rats, except at the age of one month. The decrease of this enzyme activity could induce an increased cellular generation of radical species and lipid peroxidation, which might be link to hypertension.     

Complexity,polymorphism, and recombination of mouse T-cell receptor α gene families

Genomic DNA from a large panel of inbred strains of mice were hybridized sequentially with 15 V_α, 2 V_δ, 1 C_α, and 1 C_δ probes. Most of the V_α probes detected a high degree of plymorphism and have allowed the definition of five mouse T-cell receptor α (Tcr _α) haplotypes. One of these haplotypes (Tcr _α ^e ) appears to arise from a recombination between theTcr _α ^b andTcr _α ^a haplotypes, the latter being the most frequently found in the conventional inbred strains. This recombination event clearly indicates that the members of at least 11 V_α subfamilies are not closely linked but highly interspersed with one another on chromosome 14.     

Decrypting the H-NS-dependent regulatory cascade of acid stress resistance in <Emphasis Type="Italic">Escherichia coli</Emphasis>

Background  

H-NS regulates the acid stress resistance. The present study aimed to characterize the H-NS-dependent cascade governing the acid stress resistance pathways and to define the interplay between the different regulators.     

Under what circumstances can the forest sector contribute to 2050 climate change mitigation targets? A study from forest ecosystems to landfill methane emissions for the province of Quebec,Canada

Meeting climate change mitigation targets by 2050, as outlined in international pledges, involves determining optimal strategies for forest management, wood supply, the substitution of greenhouse gas-intensive materials and energy sources, and wood product disposal. Our study quantified the cumulative mitigation potential by 2050 of the forest sector in the province of Quebec, Canada, using several alternative strategies and assessed under what circumstances the sector could contribute to the targets. We used the Carbon Budget Model of the Canadian Forest Sector to project ecosystems emissions and sequestration of seven alternative and one baseline (business-as-usual [BaU]) forest management scenarios over the 2018–2050 period. Three baskets of wood products were used in a Harvested Wood Products model to predict wood product emissions. The mitigation potential was determined by comparing the cumulative CO₂e budget of each alternative scenario to the BaU. The proportion of methane emissions from landfills (RCH₄%) and the required displacement factor (RDF) to achieve mitigation benefits were assessed both independently and jointly. The fastest and most efficient way to improve mitigation outcomes of the forest sector of Quebec is to reduce end-of-life methane emissions from wood products. By reducing methane emissions, the RDF for achieving mitigation benefits through intensification strategies can be reduced from 1.2–2.3 to 0–0.9 tC/tC, thus reaching the current provincial mean DF threshold (0.9). Both a reduction and an increase in the harvested volume have the potential to provide mitigation benefits with adequate RCH₄% and RDF. Increased carbon sequestration in ecosystems, innovations in long-lived wood products, and optimal substitution in markets offer potential avenues for the forest sector to contribute to mitigation benefits but are subject to significant uncertainties. Methane emission reduction at the end of wood product service life is emerging as a valuable approach to enhance mitigation benefits of the forest sector.     

Circulating Cell-Free DNA from Colorectal Cancer Patients May Reveal High KRAS or BRAF Mutation Load

Our data might suggest a very high variation in the proportion of malignant cells in colorectal tumors and/or low tumor cell clonogenicity. However, the direct relationship between these data and the proportion of malignant cells is currently uncertain as the mechanism of ccfDNA release determines the yield (necrosis, apoptosis, or active release). Therefore, interindividual comparison of the proportion of mutant allele determined from circulating DNA could appear somewhat more difficult to interpret; however, this parameter could be an efficient biomarker for monitoring or following up CRC patients and could be combined with size fraction analysis, as demonstrated in this study, to provide a deeper examination toward this goal.     

Tyrosine hydroxylase expression and activity in the rat brain: differential regulation after long-term intermittent or sustained hypoxia.

Tyrosine hydroxylase, a hypoxia-regulated gene, may be involved in tissue adaptation to hypoxia. Intermittent hypoxia, a characteristic feature of sleep apnea, leads to significant memory deficits, as well as to cortex and hippocampal apoptosis that are absent after sustained hypoxia. To examine the hypothesis that sustained and intermittent hypoxia induce different catecholaminergic responses, changes in tyrosine hydroxylase mRNA, protein expression, and activity were compared in various brain regions of male rats exposed for 6 h, 1 day, 3 days, and 7 days to sustained hypoxia (10% O(2)), intermittent hypoxia (alternating room air and 10% O(2)), or normoxia. Tyrosine hydroxylase activity, measured at 7 days, increased in the cortex as follows: sustained > intermittent > normoxia. Furthermore, activity decreased in the brain stem and was unchanged in other brain regions of sustained hypoxia-exposed rats, as well as in all regions from animals exposed to intermittent hypoxia, suggesting stimulus-specific and heterotopic catecholamine regulation. In the cortex, tyrosine hydroxylase mRNA expression was increased, whereas protein expression remained unchanged. In addition, significant differences in the time course of cortical Ser(40) tyrosine hydroxylase phosphorylation were present in the cortex, suggesting that intermittent and sustained hypoxia-induced enzymatic activity differences are related to different phosphorylation patterns. We conclude that long-term hypoxia induces site-specific changes in tyrosine hydroxylase activity and that intermittent hypoxia elicits reduced tyrosine hydroxylase recruitment and phosphorylation compared with sustained hypoxia. Such changes may not only account for differences in enzyme activity but also suggest that, with differential regional brain susceptibility to hypoxia, recruitment of different mechanisms in response to hypoxia will elicit region-specific modulation of catecholamine response.