Bottom-up regulation of bacterial growth in tropical phytotelm bromeliads

Evaluating the factors that regulate bacterial growth in natural ecosystems is a major goal of modern microbial ecology. Phytotelm bromeliads have been used as model ecosystems in aquatic ecology as they provide many independent replicates in a small area and often encompass a wide range of limnological conditions. However, as far as we know, there has been no attempt to evaluate the main regulatory factors of bacterial growth in these aquatic ecosystems. Here, we used field surveys to evaluate the main bottom-up factors that regulate bacterial growth in the accumulated water of tank bromeliads. Bacterial production, water temperature, water color, chlorophyll-a, and nutrient concentrations were determined for 147 different tank bromeliads in two different samplings. Bromeliad position and the season of sampling were also noted. Bacterial production was explained by ion ammonium concentration and water temperature, but the total variance explained was low (r ² = 0.104). Sampling period and bromeliad position were included in additional models that gave empirical support for predicting bacterial production. Bromeliad water tanks are extremely variable aquatic ecosystems in space (among bromeliads) and time (environmental conditions can change within hours), and it is well known that bacterial production responds rapidly to environmental change. Therefore, we concluded that several factors could independently regulate bacterial growth in phytotelm bromeliads depending on the characteristics of each bromeliad, such as location, amount of detritus, and ambient nutrient concentrations. A clear bottom-up limitation pattern of bacterial production in tropical phytotelm bromeliads was not found. Handling editor: Luigi Naselli-Flores     

Genetic Analysis and Mapping of Biochemical Markers in an F2 Intercross of Two Inbred Strains of the Rabbit (Oryctolagus cuniculus)

A total of 40 biochemical and four immunological markers found to be polymorphic in the rabbit in previous studies were screened in the AX/JU and IIIVO/JU inbred strains. Although the strains are considered unrelated, only eight (biochemical) markers were found to be polymorphic between the two strains. These eight markers were analyzed in an F₂ intercross population. Linkage was found for Est-5 and C on chromosome 1 and for Es-1, Est-2, Est-4, Est-6 and HP on linkage group VI. Two polymorphic markers, Es-3 and Mhr-1 could not be linked to any of the other markers.     

The genus Pseudo-nitzschia (Bacillariophyceae) in continental shelf waters of Argentina (Southwestern Atlantic Ocean, 38–55°S)

The distribution pattern of Pseudo-nitzschia species, associated phytoplankton flora and its relationships with main environmental factors were studied for the first time in continental shelf surface waters of the Argentine Sea (Southwestern Atlantic Ocean, 38–55°S). Both qualitative and quantitative samples, collected during summer and fall 2003, were examined using light and scanning electron microscopy. Results indicated that the genus Pseudo-nitzschia has a wide distribution along the studied area. It was present at low densities, with infrequent peak abundances and appeared most frequently as a minor component of the diatom populations that typically develop on the continental shelf of the Argentine Sea. Moreover, phytoplankton communities were numerically dominated by unidentified phytoflagellates (≤5 μm) throughout almost all samples analyzed. Eight Pseudo-nitzschia species were identified in our study: P. australis, P. fraudulenta, P. heimii, P. lineola, P. pungens, P. cf. subcurvata, P. turgidula and P. turgiduloides. Of these, P. heimii, P. lineola and P. turgiduloides are new records for the Argentine Sea. Their presence in the area is attributable to the influence of southerly cold water masses. Spatial and temporal variations of the environmental parameters recorded in the study area generally determined the distribution of Pseudo-nitzschia species. P. pungens and P. australis were widely distributed and reached high densities, especially in waters with elevated temperatures and salinities (around 15 °C, 33.8 psu) and low nutrients concentrations. On the other hand, P. heimii, P. lineola, P. turgidula and P. turgiduloides showed a more restricted distribution, with lower densities in relatively cold, less saline (8 °C, 32.45 psu) and nutrient-rich waters. From the Pseudo-nitzschia species found throughout this survey, P. australis, P. fraudulenta, P. pungens and P. turgidula are known as domoic acid (DA) producers around the world, but there is little information on the potential toxicity of these species in Argentina.     

The C-Terminal Domain of the Virulence Factor MgtC Is a Divergent ACT Domain

MgtC is a virulence factor of unknown function important for survival inside macrophages in several intracellular bacterial pathogens, including Mycobacterium tuberculosis. It is also involved in adaptation to Mg²⁺ deprivation, but previous work suggested that MgtC is not a Mg²⁺ transporter. In this study, we demonstrated that the amount of the M. tuberculosis MgtC protein is not significantly increased by Mg²⁺ deprivation. Members of the MgtC protein family share a conserved membrane N-terminal domain and a more divergent cytoplasmic C-terminal domain. To get insights into MgtC functional and structural organization, we have determined the nuclear magnetic resonance (NMR) structure of the C-terminal domain of M. tuberculosis MgtC. This structure is not affected by the Mg²⁺ concentration, indicating that it does not bind Mg²⁺. The structure of the C-terminal domain forms a βαββαβ fold found in small molecule binding domains called ACT domains. However, the M. tuberculosis MgtC ACT domain differs from canonical ACT domains because it appears to lack the ability to dimerize and to bind small molecules. We have shown, using a bacterial two-hybrid system, that the M. tuberculosis MgtC protein can dimerize and that the C-terminal domain somehow facilitates this dimerization. Taken together, these results indicate that M. tuberculosis MgtC does not have an intrinsic function related to Mg²⁺ uptake or binding but could act as a regulatory factor based on protein-protein interaction that could be facilitated by its ACT domain.     

Enhancing somatic nuclear reprogramming by Oct4 gain-of-function in cloned mouse embryos

Cloned mouse embryo development to blastocyst stage correlates positively with the expression level of Oct4 (Pou5f1) at the morula stage, as reported previously by our laboratory. However, whether this correlation is based on a cause-effect relationship has remained unclear. To address this question, we artificially increased the level of Oct4 prior and subsequent to somatic cell nuclear transfer, by microinjection of Oct4 mRNA into ooplasts and by transgenic Oct4 induction at the morula stage, respectively. We observed higher developmental rates of cloned embryos to blastocyst when higher levels of Oct4 were superimposed with the initial reprogramming events; whereas increasing Oct4 at later stages of preimplantation development did not have a significant effect on developmental rates. Our results show that supplemental Oct4 facilitates oocyte-mediated reprogramming only during the first cleavages, implying that the higher Oct4 level observed in developmentally competent cloned morulae is a readout of reprogramming events that successfully took place earlier.     

Long-Term CO2 Variability in Two Shallow Tropical Lakes Experiencing Episodic Eutrophication and Acidification Events

Here we report the long-term (13-year) dynamics of surface pCO₂ and its response to episodic eutrophication and acidification events in two contrasting tropical coastal lakes, one clear-water and the other humic. A short-term nutrient addition experiment was also conducted in mesocosms in the humic lake where in situ eutrophication was moderate. Our objective was to elucidate the response of pCO₂ to interannual changes in key limnological conditions, such as nutrient concentrations and pH. The humic waters showed a median pCO₂ almost ninefold higher across the 13-year study than the clear waters, supporting pCO₂ values about tenfold above atmospheric equilibrium. Eutrophication of the clear-water lake resulted in a decrease in pCO₂ to median values below atmospheric equilibrium, producing a strong sink for atmospheric CO₂. In contrast, pCO₂ increased by over tenfold in both lakes during the acidification phase, resulting in very large CO₂ emissions to the atmosphere. Experimental nutrient additions in the humic lake showed a strong persistence of high pCO₂. The extreme variability in pCO₂ observed here might be a characteristic of tropical lakes and may have important consequences for regional carbon budgets.