Analysis of synonymous codon usage in H5N1 virus and other influenza A viruses

In this study, we calculated the codon usage bias in H5N1 virus and performed a comparative analysis of synonymous codon usage patterns in H5N1 virus, five other evolutionary related influenza A viruses and a influenza B virus. Codon usage bias in H5N1 genome is a little slight, which is mainly determined by the base compositions on the third codon position. By comparing synonymous codon usage patterns in different viruses, we observed that the codon usage pattern of H5N1 virus is similar with other influenza A viruses, but not influenza B virus, and the synonymous codon usage in influenza A virus genes is phylogenetically conservative, but not strain-specific. Synonymous codon usage in genes encoded by different influenza A viruses is genus conservative. Compositional constraints could explain most of the variation of synonymous codon usage among these virus genes, while gene function is also correlated to synonymous codon usages to a certain extent. However, translational selection and gene length have no effect on the variations of synonymous codon usage in these virus genes.     

圈养雄獐领域行为和粪便睾酮水平变化的关系

2011年8月到2012年4月间,在上海市浦东新区华夏公园獐重引入试点,采用目标取样、扫描取样和全事件记录法,对圈养条件下6只成体雄獐(Hydropotes inermis)的6种领域行为进行观察,并利用放射免疫分析法(RIA)测定雄獐粪便中的睾酮水平变化.结果表明,雄獐的许多领域行为发生频次表现出明显的月间变化,包括打斗、威胁、取代、追逐和粪尿标记;擦额标记行为频次虽月间差异不显著,但与其他领域行为一样在11月份出现频次峰值.发情期(2011年10月～2012年1月)和非发情期(2011年9月、2012年2～4月),打斗、威胁、粪尿标记和擦额标记行为发生频次差异显著;取代和追逐行为频次差异不显著.6种领域行为的发生频次均在发情期明显高于非发情期.粪便睾酮含量在发情期和非发情期差异显著,发情期明显高于非发情期,其含量在12月份达到峰值(51.16±9.85) ng/g.雄獐的威胁、擦额标记、粪尿标记和打斗行为发生频次与睾酮水平呈显著的正相关性,而取代和追逐行为与睾酮水平变化不具有显著相关性.     

细胞色素P450调节肝脏药物代谢的途径

大量研究认为细胞色素P450与药物性肝损伤的病理生理过程密切相关,对其在肝损伤的作用已成为当前研究的一个热点.主要介绍细胞色素P450与药物性肝损伤的相关研究进展.     

传染性软疣病毒（MCV）的电镜观察

传染性软疣病毒（ＭＣＶ）的电镜观察李德忠,肖同浩,武晓华（广州军区武汉总医院电镜室,武汉４３００７０）吴宁（广州军区武汉总医院皮肤科,武汉４３００７０）关键词传染性软疣病毒,病毒形态,电镜观察曾有研究描述ＭＣＶ的发育周期中有８种形态,也有按发育过程将...     

EB病毒潜伏膜蛋白1多态性与鼻咽癌的关系

为了分析广东地区鼻咽癌病人和非鼻咽癌病人携带的Epstein-Barr病毒（EBV）潜伏膜蛋白1（LMP1）基因多态性,探讨LMP1基因羧基端缺失30个碱基的EBV是否与华南地区鼻咽癌高发有关。为此收集了初始的107例鼻咽癌病人和106例非鼻咽癌肿病人的漱口液,用巢式PCR扩增LMP1羧基端,观察缺失型LMP1的构成比。同时,测序分析缺失型LMP1编码区序列,了解缺失型LMP1多态性与鼻咽癌的关联度。结果：在50％的样品中可检出LMP1基因,缺失型LMP1在鼻咽癌病人和非鼻咽病人的构成比相似,约占70？％,原型和缺失型LMP1混合感染少见（0－6％）。另外,广州地区的缺失型LMP序列与上海、台湾、香港地区的缺失型LMP1基因高度同源,鼻咽癌病人是和非鼻咽癌病人携带的缺失型LMP1基因序列基本相同。此结果表明,广州地区流行的LMP1羧基端缺失30个碱基的EBV株,漱口液中检测出的缺失型与原型LMP1构成比约为7：3,在鼻咽癌病人和非鼻咽癌病人此分布情况相似。     

武夷山九曲溪水体营养水平与原生动物群落变化相互关系研究

2000年研究了武夷山九曲溪水体的营养状态与原生动物群落结构关系。发现并非水越清洁PFU原生动物种类就越多,这要决定于水体的营养状况。当水体是贫营养时,水越清洁,PFU原生动物种类反而会越少。研究结果表明,即使在低营养水平的水体中,PFU法一样能准确反映人类活动对当地水环境的影响。     

寄生革翅目蠼螋的被毛孢一新种

在湖北省神农架林区采集到一种寄生于蠼螋成虫的真菌标本snj121022,分离并获得菌株 GZUIFR-snj121022,经形态学、系统发育和拆分网络综合分析,鉴定其为被毛孢属的一个新种,命名为神农架被毛孢Hirsutella shennongjiaensis。本文对其进行了详细的形态特征描述、图解和系统发育分析。     

循环血中GM-CFC的性能研究

利用造血细胞体外琼脂培养技术,比较了狗的不同来源的GM—CFC增殖、分化性能和辐射敏感性。结果表明,在正常生理条件下循环血中GM—CFC集落产率约为骨髓的1/60;细胞集落开始形成时间较骨髓晚1天,细胞集落随培养时间(前3—5天)增加而增加,其增加速率约为骨髓的20%;辐射敏感性D_0值为0.34Gy,明显低于骨髓中GM—CFC的D_0值(0.82Gy)。造血干细胞动员剂动员后血中GM—CFC数量明显增加,细胞集落增加速率约为骨髓的59%,D_0值为0.72Gy。从而为循环血干细胞移植疗效提供了实验依据。     

Response of rice (Oryza sativa) with root surface iron plaque under aluminium stress

BACKGROUND AND AIMS: Rice (Oryza sativa) is an aquatic plant with a characteristic of forming iron plaque on its root surfaces. It is considered to be the most Al-tolerant species among the cereal crops. The objective of this study was to determine the effects of root surface iron plaque on Al translocation, accumulation and the change of physiological responses under Al stress in rice in the presence of iron plaque. METHODS: The japonica variety rice, Koshihikari, was used in this study and was grown hydroponically in a growth chamber. Iron plaque was induced by exposing the rice roots to 30 mg L(-1) ferrous iron either as Fe(II)-EDTA in nutrient solution (6 d, Method I) or as FeSO(4) in water solution (12 h, Method II). Organic acid in root exudates was retained in the anion-exchange resin and eluted with 2 m HCl, then analysed by high-performance liquid chromatography (HPLC) after proper pre-treatment. Fe and Al in iron plaque were extracted with DCB (dithionite-citrate-bicarbonate) solution. KEY RESULTS AND CONCLUSIONS: Both methods (I and II) could induce the formation of iron plaque on rice root surfaces. The amounts of DCB-extractable Fe and Al on root surfaces were much higher in the presence of iron plaque than in the absence of iron plaque. Al contents in root tips were significantly decreased with iron plaque; translocation of Al from roots to shoots was significantly reduced with iron plaque. Al-induced secretion of citrate was observed and iron plaque could greatly depress this citrate secretion. These results suggested that iron plaque on rice root surfaces can be a sink to sequester Al onto the root surfaces and Fe ions can pre-saturate Al-binding sites in root tips, which protects the rice root tips from suffering Al stress to a certain extent.