Accounting for spatial autocorrelation in null models of tree species association

A commonly used null model for species association among forest trees is a well‐mixed community (WMC). A WMC represents a non‐spatial, or spatially implicit, model, in which species form nearest‐neighbor pairs at a rate equal to the product of their community proportions. WMC models assume that the outcome of random dispersal and demographic processes is complete spatial randomness (CSR) in the species’ spatial distributions. Yet, stochastic dispersal processes often lead to spatial autocorrelation (SAC) in tree species densities, giving rise to clustering, segregation, and other nonrandom patterns. Although methods exist to account for SAC in spatially‐explicit models, its impact on non‐spatial models often remains unaccounted for. To investigate the potential for SAC to bias tests based upon non‐spatial models, we developed a spatially‐heterogeneous (SH) modelling approach that incorporates measured levels of SAC. Using the mapped locations of individuals in a tropical tree community, we tested the hypothesis that the identity of nearest‐neighbors represents a random draw from neighborhood species pools. Correlograms of Moran's I confirmed that, for 50 of 51 dominant species, stem density was significantly autocorrelated over distances ranging from 50 to 200 m. The observed patterns of SAC were consistent with dispersal limitation, with most species occurring in distinct patches. For nearly all of the 106 species in the community, the frequency of pairwise association was statistically indistinguishable from that projected by the null models. However, model comparisons revealed that non‐spatial models more strongly underestimated observed species‐pair frequencies, particularly for conspecific pairs. Overall, the CSR models projected more significant facilitative interactions than did SH models, yielding a more liberal test of niche differences. Our results underscore the importance of accounting for stochastic spatial processes in tests of association, regardless of whether spatial or non‐spatial models are employed.     

A century of generalization

We review data from both ethology and psychology about generalization, that is how animals respond to sets of stimuli including familiar and novel stimuli. Our main conclusion is that patterns of generalization are largely independent of systematic group (evidence is available for insects, fish, amphibians, reptiles, birds and mammals, including humans), behavioural context (feeding, drinking, courting, etc.), sensory modality (light, sound, etc.) and of whether reaction to stimuli is learned or genetically inherited. These universalities suggest that generalization originates from general properties of nervous systems, and that evolutionary strategies to cope with novelty and variability in stimulation may be limited. Two major shapes of the generalization gradient can be identified, corresponding to two types of stimulus dimensions. When changes in stimulation involve a rearrangement of a constant amount of stimulation on the sense organs, the generalization gradient peaks close to familiar stimuli, and peak responding is not much higher than responding to familiar stimuli. Contrary to what is often claimed, such gradients are better described by Gaussian curves than by exponentials. When the stimulus dimension involves a variation in the intensity of stimulation, the gradient is often monotonic, and responding to some novel stimuli is considerably stronger than responding to familiar stimuli. Lastly, when several or many familiar stimuli are close to each other predictable biases in responding occur, along all studied dimensions. We do not find differences between biases referred to as peak shift and biases referred to as supernormal stimulation. We conclude by discussing theoretical issues.     

Thermodynamic and metabolic effects on the scaling of production and population energy use

Ecosystem properties result in part from the characteristics of individual organisms. How these individual traits scale to impact ecosystem‐level processes is currently unclear. Because metabolism is a fundamental process underlying many individual‐ and population‐level variables, it provides a mechanism for linking individual characteristics with large‐scale processes. Here we use metabolism and ecosystem thermodynamics to scale from physiology to individual biomass production and population‐level energy use. Temperature‐corrected rates of individual‐level biomass production show the same body‐size dependence across a wide range of aerobic eukaryotes, from unicellular organisms to mammals and vascular plants. Population‐level energy use for both mammals and plants are strongly influenced by both metabolism and thermodynamic constraints on energy exchange between trophic levels. Our results show that because metabolism is a fundamental trait of organisms, it not only provides a link between individual‐ and ecosystem‐level processes, but can also highlight other important factors constraining ecological structure and dynamics.     

Plant allometry, stoichiometry and the temperature-dependence of primary productivity

Aim While physical constraints influence terrestrial primary productivity, the extent to which geographical variation in productivity is influenced by physiological adaptations and changes in vegetation structure is unclear. Further, quantifying the effect of variability in species traits on ecosystems remains a critical research challenge. Here, we take a macroecological approach and ask if variation in the stoichiometric traits (C: N: P ratios) of plants and primary productivity across global‐scale temperature gradients is consistent with a scaling model that integrates recent insights from the theories of metabolic scaling and ecological stoichiometry. Location This study is global in scope, encompassing a wide variety of terrestrial plant communities. Methods We first develop a scaling model that incorporates potentially adaptive variation in leaf and whole‐plant nutrient content, kinetic aspects of photosynthesis and plant respiration, and the allometry of biomass partitioning and allocation. We then examine extensive data sets concerning the stoichiometry and productivity of diverse plant communities in light of the model. Results Across diverse ecosystems, both foliar stoichiometry (N : P) and ‘nitrogen productivity’ (which depends on both community size structure and plant nutrient content) vary systematically across global scale temperature gradients. Primary productivity shows no relationship to temperature. Main conclusions The model predicts that the observed patterns of variation in plant stoichiometry and nutrient productivity may offset the temperature dependence of primary production expected from the kinetics of photosynthesis alone. Our approach provides a quantitative framework for treating potentially adaptive functional variation across communities as a continuum and may thus inform studies of global change. More generally, our approach represents one of the first explicit combinations of ecological stoichiometry and metabolic scaling theories in the analysis of macroecological patterns.     

A Dutch guideline for the treatment of scoliosis in neuromuscular disorders

Background

Children with neuromuscular disorders with a progressive muscle weakness such as Duchenne Muscular Dystrophy and Spinal Muscular Atrophy frequently develop a progressive scoliosis. A severe scoliosis compromises respiratory function and makes sitting more difficult. Spinal surgery is considered the primary treatment option for correcting severe scoliosis in neuromuscular disorders. Surgery in this population requires a multidisciplinary approach, careful planning, dedicated surgical procedures, and specialized after care.

Methods

The guideline is based on scientific evidence and expert opinions. A multidisciplinary working group representing experts from all relevant specialties performed the research. A literature search was conducted to collect scientific evidence in answer to specific questions posed by the working group. Literature was classified according to the level of evidence.

Results

For most aspects of the treatment scientific evidence is scarce and only low level cohort studies were found. Nevertheless, a high degree of consensus was reached about the management of patients with scoliosis in neuromuscular disorders. This was translated into a set of recommendations, which are now officially accepted as a general guideline in the Netherlands.

Conclusion

In order to optimize the treatment for scoliosis in neuromuscular disorders a Dutch guideline has been composed. This evidence-based, multidisciplinary guideline addresses conservative treatment, the preoperative, perioperative, and postoperative care of scoliosis in neuromuscular disorders.     

Origins of asexuality in <Emphasis Type="Italic">Bryobia</Emphasis>mites (Acari: Tetranychidae)

Background  

Obligate asexual reproduction is rare in the animal kingdom. Generally, asexuals are considered evolutionary dead ends that are unable to radiate. The phytophagous mite genus Bryobia contains a large number of asexual species. In this study, we investigate the origin and evolution of asexuality using samples from 111 populations in Europe, South Africa and the United States, belonging to eleven Bryobia species. We also examine intraspecific clonal diversity for one species, B. kissophila, by genotyping individuals from 61 different populations. Knowledge on the origin of asexuality and on clonal diversity can contribute to our understanding of the paradox of sex.     

Communication during aggressive interactions with particular reference to variation in choice of behaviour

Communication during aggressive interactions is discussed and defined primarily on the basis of functional considerations. A distinction is made between communication due to choice of action and communication due to performance of a given choice of action. Most attention is directed to choice of behaviour. Two models are developed to show that there are no arguments of general validity against communication through choice of behaviour or signalling as has been claimed. The first model is built on variation in fighting ability only and shows that choice of signal can carry information both about intentions (use of local strategy) and fighting ability. The second model which is based on the war of attrition with random rewards instead considers variation in subjective resource value. It shows that signalling of local strategy can be stable. It is concluded that evolutionary stability of communication through choice of behaviour is due to variation among animals in the utility of showing different behaviour patterns whereas communication by performance is due to a not easily removed relationship between the performance of a certain behaviour pattern and the factor communicated.     

Mutation of the YXXL endocytosis motif in the cytoplasmic tail of pseudorabies virus gE

The role of alphaherpesvirus membrane protein internalization during the course of viral infection remains a matter of speculation. To determine the role of internalization of the pseudorabies virus (PRV) gE and gI proteins, we constructed viral mutants encoding specific mutations in the cytoplasmic tail of the gE gene that inhibited internalization of the gE-gI complex. We used these mutants to assess the role of gE-gI endocytosis in incorporation of the proteins into the viral envelope and in gE-mediated spread or gE-promoted virulence. In addition, we report that another viral mutant, PRV 25, which encodes a gE protein defective in endocytosis, contains an additional, previously uncharacterized mutation in the gE gene. We compared PRV 25 to another viral mutant, PRV 107, that does not express the cytoplasmic tail of the gE protein. The gE protein encoded by PRV 107 is also defective in endocytosis. We conclude that efficient endocytosis of gE is not required for gE incorporation into virions, gE-mediated virulence, or spread of virus in the rat central nervous system. However, we do correlate the defect in endocytosis to a small-plaque phenotype in cultured cells.