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11.
Kundrotas P Georgieva P Shosheva A Christova P Alexov E 《International journal of biological macromolecules》2007,41(1):114-119
The nucleoside monophosphate kinases (NMPK) are important enzymes that control the ratio of mono- and di-phosphate nucleosides and participate in gene regulation and signal transduction in the cell. However, despite their importance only several 3D structures were experimentally determined in contrast to the wealth of sequences available for each of the NMPK families. To fill this gap we present a Web-based database containing structural models for all proteins of the five bacterial nucleoside monophosphate kinase (bNMPK) families. The models were computed by means of homology-based approach using a few experimentally determined bNMPK structures. The database also contains pK(a) values and their components calculated for the homology-based 3D models, which is a unique feature of the database. The BActerial Nucleoside MOnophosphate KInases (BANMOKI) database is freely accessible (http://www.ces.clemson.edu/compbio/banmoki) and offers an easy user-friendly interface for browsing, searching and downloading content of the database. The users can investigate, using the searching tools of the database, the properties of the bNMP kinases in respect to sequence composition, electrostatic interactions and structural differences. 相似文献
12.
Effect of S-methylmethionine on the photosynthesis in maize at different chilling temperatures 总被引:1,自引:0,他引:1
Eszter Kósa Dóra Szegő Eszter Horváth Ilona Rácz Zoltán Szigeti Demeter Lásztity Emil Páldi 《Central European Journal of Biology》2011,6(1):75-83
The effect of the natural compound S-methylmethionine (SMM) on the functioning of the photosynthetic apparatus, the efficiency
of photosynthesis and the synthesis of stress-induced phenoloids and anthocyanins involved in defence was investigated in
young maize plants exposed to moderate and severe chilling stress. Damage to PSII was observed as a reduction in the value
of variable fluorescence (Fv/Fm) which could be detected even after few hours of mild chilling stress. At temperatures below
10°C, the reduction in Fv/Fm was more pronounced. Changes in the value of net photosynthesis exhibited a similar tendency.
SMM has a moderating effect on this reduction and its protective effect was more pronounced under long-lasting chilling stress
and at the lowest temperatures. Monitoring of fluorescence intensities and ratios correlated with the levels of stress defence
compounds. The fluorescence intensities were found to increase over the course of chilling stress in response to SMM, with
the highest values being recorded in plants exposed to the longest period of stress. A similar tendency was observed for the
quantity of anthocyanins. The results confirm the complex role of SMM, which is manifested both in preserving the ability
of the photosynthetic apparatus to function and in stimulating the synthesis of metabolites involved in stress defence. 相似文献
13.
This study aimed to create an evidence base for detection of stance-phase timings from motion capture in horses. The objective was to compare the accuracy (bias) and precision (SD) for five published algorithms for the detection of hoof-on and hoof-off using force plates as the reference standard. 相似文献
14.
Song Huijia Jespersen Emil Guo Xiao Du Ning Xie Liujuan Pei Lixin Ye Siyuan Wang Renqing Brix Hans Eller Franziska Guo Weihua 《Hydrobiologia》2021,848(14):3353-3369
Hydrobiologia - Soil salinity diminishes the dominance of species and affects their distribution. Phragmites australis is a dominant ecosystem engineer with broad distribution, high intraspecific... 相似文献
15.
Tereza Cristina Santos Evangelista
scar Lpez Sabrina Baptista Ferreira Jos G. Fernndez-Bolaos Magne O. Sydnes Emil Lindbck 《Journal of enzyme inhibition and medicinal chemistry》2021,36(1):1659
The synthesis of four tetra-tacrine clusters where the tacrine binding units are attached to a central scaffold via linkers of variable lengths is described. The multivalent inhibition potencies for the tacrine clusters were investigated for the inhibition of acetylcholinesterase. Two of the tacrine clusters displayed a small but significant multivalent inhibition potency in which the binding affinity of each of the tacrine binding units increased up to 3.2 times when they are connected to the central scaffold. 相似文献
16.
Eliasson Lantz A Jørgensen P Poulsen E Lindemann C Olsson L 《Journal of biotechnology》2006,121(4):544-554
Multi-wavelength fluorescence was applied for on-line monitoring of cell mass and the antibiotic polymyxin B in Bacillus polymyxa cultivations. By varying the phosphate and nitrogen content of the medium different polymyxin-cell mass ratios could be obtained. Using this strategy, it was possible to investigate if multi-wavelength fluorescence is able to give independent prediction of the two parameters. Partial least square (PLS) regression was applied to establish mathematical relationships between off-line determined cell mass and polymyxin concentrations and on-line collected fluorescence data. For polymyxin one universal PLS model, with a correlation of 0.95 and a root mean square error of cross validation (RMSECV) of 35 mgl(-1), could be constructed. However, correlation between fluorescence and cell mass dry weight could not be established including data from all three types of cultivations. For data from each type of cultivation, separate models with high correlation and low RMSECV values were built. A large variation in cellular composition as a result of the different levels of nitrogen and phosphorus in the cultivations was the probable reason to the necessity of building three models. The results of the present investigation indicate that production of polymyxin is concomitantly regulated by phosphate and nitrogen as the highest polymyxin yield on cell mass, 0.17+/-0.01 gg(-1), was reached in the cultivations where both nitrogen and phosphate concentrations were kept low. 相似文献
17.
Nestor Cortez Augusto F. Garcia Monier H. Tadros Nasser Gad'on Emil Schiltz Gerhart Drews 《Archives of microbiology》1992,158(5):315-319
Labelling of Rhodobacter capsulatus cells with (32P)Pi in a phototrophic culture results in phosphorylation of a membrane-bound polypeptide identified as the subunit of the LHI antenna complex of the photosynthetic apparatus. Phosphorylation of the same polypeptide was also observed by incubation of chromatophores with (32P)ATP or under conditions of photophosphorylation with ADP and (32P)Pi. The identity of the phosphorylated LHI- subunit was demonstrated by N-terminal protein sequencing of the phosphorylated polypeptide and by failure of labelling in LHI-defective mutants. Pre-aeration of the samples or addition of the oxidant potassium ferrcyanide stimulated the kinase activity whereas the presence of soluble cytoplasmic proteins impaired phosphorylation in an in vitro assay. No effect resulted from addition of reductants to the assay medium. The results indicate the presence of a membrane-bound protein kinase in R. capsulatus that phosphorylates the subunit of the LHI antenna complex under redox control.Abbreviations Pi
inorganic phosphate
- SDS-PAGE
sodium dodecyl-sulfate polyacrylamide gel electrophoresis 相似文献
18.
Amisa Mukaj Jaroslav Pilek Vladana Fotopulosova Andrew Parker Morgan Linda Odenthal-Hesse Emil D Parvanov Jiri Forejt 《Molecular biology and evolution》2020,37(12):3423
The classical definition posits hybrid sterility as a phenomenon when two parental taxa each of which is fertile produce a hybrid that is sterile. The first hybrid sterility gene in vertebrates, Prdm9, coding for a histone methyltransferase, was identified in crosses between two laboratory mouse strains derived from Mus mus musculus and M. m. domesticus subspecies. The unique function of PRDM9 protein in the initiation of meiotic recombination led to the discovery of the basic molecular mechanism of hybrid sterility in laboratory crosses. However, the role of this protein as a component of reproductive barrier outside the laboratory model remained unclear. Here, we show that the Prdm9 allelic incompatibilities represent the primary cause of reduced fertility in intersubspecific hybrids between M. m. musculus and M. m. domesticus including 16 musculus and domesticus wild-derived strains. Disruption of fertility phenotypes correlated with the rate of failure of synapsis between homologous chromosomes in meiosis I and with early meiotic arrest. All phenotypes were restored to normal when the domesticus Prdm9dom2 allele was substituted with the Prdm9dom2H humanized variant. To conclude, our data show for the first time the male infertility of wild-derived musculus and domesticus subspecies F1 hybrids controlled by Prdm9 as the major hybrid sterility gene. The impairment of fertility surrogates, testes weight and sperm count, correlated with increasing difficulties of meiotic synapsis of homologous chromosomes and with meiotic arrest, which we suppose reflect the increasing asymmetry of PRDM9-dependent DNA double-strand breaks. 相似文献
19.
Prospective Studies Exploring the Possible Impact of an ID3 Polymorphism on Changes in Obesity Measures 下载免费PDF全文
20.
Marie Brázdová Lucie Navrátilová Vlastimil Tichy Kate?ina Němcová Matej Lexa Roman Hrstka Petr Pe?inka Matej Adámik Borivoj Vojtesek Emil Pale?ek Wolfgang Deppert Miroslav Fojta 《PloS one》2013,8(3)
Hot spot mutant p53 (mutp53) proteins exert oncogenic gain-of-function activities. Binding of mutp53 to DNA is assumed to be involved in mutp53-mediated repression or activation of several mutp53 target genes. To investigate the importance of DNA topology on mutp53-DNA recognition in vitro and in cells, we analyzed the interaction of seven hot spot mutp53 proteins with topologically different DNA substrates (supercoiled, linear and relaxed) containing and/or lacking mutp53 binding sites (mutp53BS) using a variety of electrophoresis and immunoprecipitation based techniques. All seven hot spot mutp53 proteins (R175H, G245S, R248W, R249S, R273C, R273H and R282W) were found to have retained the ability of wild-type p53 to preferentially bind circular DNA at native negative superhelix density, while linear or relaxed circular DNA was a poor substrate. The preference of mutp53 proteins for supercoiled DNA (supercoil-selective binding) was further substantiated by competition experiments with linear DNA or relaxed DNA in vitro and ex vivo. Using chromatin immunoprecipitation, the preferential binding of mutp53 to a sc mutp53BS was detected also in cells. Furthermore, we have shown by luciferase reporter assay that the DNA topology influences p53 regulation of BAX and MSP/MST1 promoters. Possible modes of mutp53 binding to topologically constrained DNA substrates and their biological consequences are discussed. 相似文献