Public Internet‐connected cameras used as a cross‐continental ground‐based plant phenology monitoring system

Plant phenology is highly sensitive to changes in environmental conditions and can vary widely across landscapes. Current observation methods are either manual for small‐scale, high precision measurements or by satellite remote sensing for large‐scale, low spatial resolution measurement. The development of inexpensive approaches is necessary to advance large scale, high precision phenology monitoring. The use of publicly available, Internet‐connected cameras, often associated with airports, national parks, and roadway conditions, for detecting and monitoring plant phenology at a continental scale can augment existing ground and satellite‐based methodologies. We collected twice‐daily images from over 1100 georeferenced public cameras across North America from February 2008 to 2009. Using a test subset of these cameras, we compared modeled spring ‘green‐up’ with that from co‐occurring remote sensing products. Although varying image exposure and color correction introduced noise to camera measurements, we were able to correlate spring green‐up across North America with visual validation from images and detect a latitudinal trend. Public cameras had an equivalent or higher ability to detect spring compared with satellite‐based data for corresponding locations, with fewer numbers of poor quality days, shorter continuous bad data days, and significantly lower errors of spring estimates. Manual image segmentation into deciduous, evergreen, and understory vegetation allowed detection of spring and fall onset for multiple vegetation types. Additional advantages of a public camera‐based monitoring system include frequent image capture (subdaily) and the potential to detect quantitative responses to environmental changes in organisms, species, and communities. Public cameras represent a relatively untapped and freely available resource for supporting large‐scale ecological and environmental monitoring.     

MtZR1, a PRAF protein,is involved in the development of roots and symbiotic root nodules in Medicago truncatula

PRAF proteins are present in all plants, but their functions remain unclear. We investigated the role of one member of the PRAF family, MtZR1, on the development of roots and nitrogen‐fixing nodules in Medicago truncatula. We found that MtZR1 was expressed in all M. truncatula organs. Spatiotemporal analysis showed that MtZR1 expression in M. truncatula roots was mostly limited to the root meristem and the vascular bundles of mature nodules. MtZR1 expression in root nodules was down‐regulated in response to various abiotic stresses known to affect nitrogen fixation efficiency. The down‐regulation of MtZR1 expression by RNA interference in transgenic roots decreased root growth and impaired nodule development and function. MtZR1 overexpression resulted in longer roots and significant changes to nodule development. Our data thus indicate that MtZR1 is involved in the development of roots and nodules. To our knowledge, this work provides the first in vivo experimental evidence of a biological role for a typical PRAF protein in plants.     

Enhanced assimilation rate and water use efficiency with latitude through increased photosynthetic capacity and internal conductance in balsam poplar (Populus balsamifera L.)

In outdoor common gardens, high latitude populations of deciduous tree species often display higher assimilation rates ( A ) than low latitude populations, but they accomplish less height. To test whether trends in A reflect adaptation to growing season length or, alternatively, are garden growth artefacts, we examined variation in height increment and ecophysiological traits in a range-wide collection of Populus balsamifera L. populations from 21 provenances, during unconstrained growth in a greenhouse. Rooted cuttings, maintained without resource limitation under 21 h photoperiod for 90 d, displayed increasing height growth, A , leaf mass per area and leaf N per area with latitude whereas stomatal conductance ( g _s) showed no pattern. Water-use efficiency as indicated by both gas exchange and δ ¹³C increased with latitude, whereas photosynthetic nitrogen-use efficiency decreased. Differences in δ ¹³C were less than expected based on A/g _s, suggesting coextensive variation in internal conductance ( g _m). Analysis of A – C _i curves on a subset of populations showed that high latitude genotypes had greater g _m than low-latitude genotypes. We conclude that higher peak rates of height growth in high latitude genotypes of balsam poplar are supported by higher A , achieved partly through higher g _m, to help compensate for a shorter growing season.     

Range dynamics of small mammals along an elevational gradient over an 80‐year interval

One expected response to observed global warming is an upslope shift of species elevational ranges. Here, we document changes in the elevational distributions of the small mammals within the Ruby Mountains in northeastern Nevada over an 80‐year interval. We quantified range shifts by comparing distributional records from recent comprehensive field surveys (2006–2008) to earlier surveys (1927–1929) conducted at identical and nearby locations. Collector field notes from the historical surveys provided detailed trapping records and locality information, and museum specimens enabled confirmation of species' identifications. To ensure that observed shifts in range did not result from sampling bias, we employed a binomial likelihood model (introduced here) using likelihood ratios to calculate confidence intervals around observed range limits. Climate data indicate increases in both precipitation and summer maximum temperature between sampling periods. Increases in winter minimum temperatures were only evident at mid to high elevations. Consistent with predictions of change associated with climate warming, we document upslope range shifts for only two mesic‐adapted species. In contrast, no xeric‐adapted species expanded their ranges upslope. Rather, they showed either static distributions over time or downslope contraction or expansion. We attribute these unexpected findings to widespread land‐use driven habitat change at lower elevations. Failure to account for land‐use induced changes in both baseline assessments and in predicting shifts in species distributions may provide misleading objectives for conservation policies and management practices.     

Quantifying the effects of temperature and flow regime on the abundance of 0+ cyprinids in the upper River Rhone using Bayesian hierarchical modelling

1. Assuming that recruitment variation is one of the main sources of fish population and assemblage changes, it is necessary to understand how natural variations in the environment influence 0+ fish abundance. Temperature regimes play an important role in enhancing both spawning activity and survival during early larval fish development. Flow regime variation, which is a powerful source of stream disturbance, is another factor to be taken into account. 2. Responses to these variables need to be assessed using long‐term datasets, since standard statistical approaches fail to provide a causal structure or to quantify the different effects. We therefore used a 26‐year dataset to evaluate the respective effects of seven derived independent variables describing the effects of temperature and flow regimes on the 0+ juvenile abundance of eight fish species in the River Rhone. 3. A clustering procedure using the Kendall tau rank correlation coefficient was implemented and identified three groups of fish according to their synchronic variations in juvenile abundance; i.e. varying with decreasing juvenile abundance, slightly increasing juvenile abundance and increasing juvenile abundance. These clusters provided the basis for building hierarchical log‐Poisson generalized linear models. The Bayesian paradigm gives a reliable framework for model selection, and the best model was determined using the Bayes Factor. 4. The posterior distribution of the regression parameters was coherent with what was expected based on knowledge of the biology of the different species. It indicates that temperature regime drives 0+ juvenile abundance but that flow regime also plays an important regulating role. The models thus detected evidence of the consequences of specific flow events such as larval drift and an increase in available habitat during higher flow discharges. 5. Our study illustrates the advantages of using a hierarchical modelling approach to quantify ecological effects by improving discrimination between the different sources of uncertainty, leading to better precision when estimating regression parameters.     

Effect of long-term and rapid cold hardening on the cold torpor temperature of an aphid

Abstract.  The effect of long-term (seasonal) acclimation and rapid cold hardening is investigated on the cold torpor temperature ( CT _min) of adult grain aphids, Sitobion avenae, reared at 20 or 10 °C for more than 6 months before experimentation. Rapid cold hardening is induced by exposing aphids reared at 20 to 0 °C for 3 h and aphids reared at 10 to 0 °C for 30 min (acclimation regimes previously found to induce maximum rapid cold hardening). The effect of cooling aphids from the same rearing regimes from 10 to −10 °C at 1, 0.5 and 0.1 °C min⁻¹ is also investigated. In the 20 °C acclimated population, rapid cold hardening and cooling at 0.1 °C min⁻¹ both produce a significant decrease in CT _min from 1.5 ± 0.3 to –0.9 ± 0.3 and –1.3 ± 0.3 °C, respectively. Rapid cold hardening also results in a significant reduction in CT _min of the population reared at 10 °C from 0.8 ± 0.1 to –0.9 ± 0.2 °C. However, none of the cooling regimes tested reduces the CT _min of the winter-acclimated (10 °C) population. The present study demonstrates that rapid cold-hardening induced during the cooling phase of natural diurnal temperature cycles could lower the movement threshold of S. avenae , allowing insects to move and continue feeding at lower temperatures than would otherwise be possible.