Development and characterization of microsatellite markers from the yellow passion fruit (Passiflora edulis f. flavicarpa)

Here we described the development of the first set of Passiflora microsatellite loci isolated from an enriched genomic library. A sample of 43 individuals from 12 accessions of the yellow passion fruit was used to characterize those loci, which revealed up to 20 alleles per locus. Two loci were monomorphic. The observed (H_O) and expected (H_E) heterozygosities were very similar, as expected for a self‐incompatible species. Allelic diversity (H_T) was 0.444. This set of markers will permit genetic structure analyses of cultivated and wild populations of Passiflora, and contribute for integrating genetic maps based on dominant markers, as they can provide bridge alleles.     

Strong founder effects and low genetic diversity in introduced populations of Coqui frogs

The success of non-native species may depend on the genetic resources maintained through the invasion process. The Coqui ( Eleutherodactylus coqui ), a frog endemic to Puerto Rico, was introduced to Hawaii in the late 1980s via the horticulture trade, and has become an aggressive invader. To explore whether genetic diversity and population structure changed with the introduction, we assessed individuals from 15 populations across the Hawaiian Islands and 13 populations across Puerto Rico using six to nine polymorphic microsatellite loci and five dorsolateral colour patterns. Allelic richness ( R _T) and gene diversity were significantly higher in Puerto Rico than in Hawaii populations. Hawaii also had fewer colour patterns (two versus three to five per population) than Puerto Rico. We found no isolation by distance in the introduced range, even though it exists in the native range. Results suggest extensive mixing among frog populations across Hawaii, and that their spread has been facilitated by humans. Like previous research, our results suggest that Hawaiian Coquis were founded by individuals from sites around San Juan, but unlike previous research the colour pattern and molecular genetic data (nuclear and mtDNA) support two separate introductions, one on the island of Hawaii and one on Maui. Coquis are successful invaders in Hawaii despite the loss of genetic variation. Future introductions may increase genetic variation and potentially its range.     

Phylogeny of the nuthatches of the Sitta canadensis group and its evolutionary and biogeographic implications

A phylogeny of ten species of nuthatch (Sittidae), including the newly described Kabylie Nuthatch Sitta ledanti of North Africa, was constructed using a sequence of 491 bp of the cytochrome-b gene of mtDNA. On the basis of trees derived using parsimony analysis and neighbour-joining methods, and assessments of robustness based on bootstrap analysis, the following phylogenetic relationships were inferred: the five species of the Sitta canadensis group are a monophyletic group, within which S. canadensis, S. whiteheadi and S. villosa form the sister clade of S. krueperi and S. ledanti; the other relations are not so well supported. These phylogenetic relationships are congruent with morphology. Differences in behavioural and ecological characters as well as biogeographic patterns are discussed.     

Designating Seasonality Using Rate of Movement

ABSTRACT Traditionally, seasons for animals have been designated based on single external variables such as climate or plant phenology, rather than an animal's response to the dynamic environments within which it lives. By interpreting a rate of movement function of cumulative movement through time we established a method that distinguishes transitions between behaviors limited by winter habitat conditions from those present during summer. Identification of these time periods provides temporal definition to subsequent home-range analyses and use-availability comparisons. We used location data from 32 Global Positioning System-collared female moose (Alces alces) to demonstrate the method. We used model selection (Akaike's Information Criterion) to differentiate between candidate rate of movement response curves. Of 32 moose, 29 clearly conformed to an annual movement pattern described by a logistic curve, with increased rates of movement in summer compared to winter. Conversely, 3 aberrant individuals did not alter their movement rate through the year and were best fit with a linear response curve. The seasonal rate of movement model we developed suggests an average summer period of 122 days (median = 119 days, range = 96–173 days) for moose in northwestern Ontario, Canada. The rate of movement model we applied to individuals indicated 1 May as the median date for the winter-summer transition (range = 2 Apr–24 May), and the median transition from summer to winter was 25 August (range = 1 Aug–23 Oct). Wide variation in timing and duration of summer and winter seasons among individuals demonstrates potential failure of the single external variable approach to capture the suite of factors potentially influencing animal behaviors. By plotting cumulative distance moved throughout the year, we elucidated individual variation in response to known and unknown variables that affect animal movement. Accounting for variability among individuals in designation of biologically significant temporal boundaries is critical to delineation of seasonally important habitats for conservation and sustainability of healthy wildlife populations.     

Modeling Distribution of Dispersal Distances in Male White-Tailed Deer

Abstract: Dispersal distances and their distribution pattern are important to understanding such phenomena as disease spread and gene flow, but oftentimes dispersal characteristics are modeled as a fixed trait for a given species. We found that dispersal distributions differ for spring and autumn dispersals of yearling male white-tailed deer (Odocoileus virginianus) but that combined data can be adequately modeled based on a log-normal distribution. We modeled distribution of dispersal distances from 3 distinct populations in Pennsylvania and Maryland, USA, based on the relationship between percent forest cover and mean dispersal distance and the relationship between mean and variance of dispersal distances. Our results suggest distributions of distances for dispersing yearling male white-tailed deer can be modeled by simply measuring a readily obtained landscape metric, percent forest cover, which could be used to create generalized spatially explicit disease or gene flow models.     

Utility of Expert-Based Knowledge for Predicting Wildlife-Vehicle Collisions

ABSTRACT Wildlife-vehicle collisions have important ecological, economic, and social effects. In North America and across northern Europe, moose (Alces alces) are one of the largest ungulates hit by motor vehicles. The force and increasing frequency of these collisions has resulted in a commitment by wildlife and transportation agencies to limit or reduce causal factors. In an effort to improve these mitigation strategies, we used the most readily available source of knowledge of collision factors, expert opinion, to develop a series of models that explained and predicted location of moose-vehicle collisions (MVC). We developed expert-based models using the Analytical Hierarchy Process (AHP) and we used a structured survey approach where experts could assess criteria relevancy, weight criteria, and review weights for consistency. We hypothesized that collisions were the product of habitat- or driver-related factors and we formulated the survey accordingly. We used the receiver operating characteristic to validate the resulting models and the Kappa index of agreement to quantify differences among spatial predictions originating from the experts. Local and nonlocal experts weighted the moose habitat classification as the most important criterion for identifying MVC. Among driver-related criteria, speed limit was weighted as the most important factor. Overall, habitat-based models were more proficient than driver-based models in predicting MVC within Mount Revelstoke and Glacier National Parks, Canada. Both local and nonlocal expert models were excellent predictors of MVC, with local experts slightly outperforming nonlocal experts. Considering that habitat-related criteria were more powerful for predicting MVC, and that habitat can vary considerably across study areas, we suggest that local experts be used when possible. The AHP is a valuable tool for wildlife, highway, and park managers to better understand why and where wildlife-vehicle collisions occur. Adopting this process, our data suggested that MVC were most strongly correlated with highway attractants associated with habitat. Vegetation management or alternative routing could minimize spatial juxtaposition of moose and motor vehicles.     

Characterization of the Target Antigens of Phytomonas-specific Monoclonal Antibodies

ABSTRACT. Seven Phytomonas -specific monoclonal antibodies produced against Phytomonas serpens and Phytomonas françai were further characterised in order to identify and localise their target antigens. Four monoclonal antibodies recognized carbohydrate surface epitopes, in three of the cases associated with surface glycoproteins with apparent molecular weight of 80 kDa. One monoclonal antibody apparently bound to a surface/internal protein epitope, whereas the two others recognized intra-cellular proteins. The cell surface epitopes recognized by monoclonal antibodies were detected specifically in the genus Phytomonas. These epitopes, which are detected in culture, plant and insect forms, may be useful as targets for Phytomonas identification.     

Epigenetic Regulation of Programmed Genomic Rearrangements in Paramecium aurelia1

ABSTRACT In ciliates, development of the polyploid somatic macronucleus after sexual events involves extensive and reproducible rearrangements of the germ-line genome, including chromosome fragmentation and precise excision of numerous internal sequence elements. In Paramecium aurelia, alternative macronuclear versions of the same germ-line genome can be maternally inherited across sexual generations, showing that rearrangement patterns are not strictly determined by the germ-line sequence. Homology-dependent maternal effects can be evidenced by transformation of the vegetative macronucleus with cloned macronuclear sequences: new fragmentation patterns or internal deletions are specifically induced during differentiation of a new macronucleus, in sexual progeny of transformed clones. Furthermore, transformation of the maternal macronucleus with germ-line sequences containing internal eliminated sequences (short single-copy elements) can result in a specific inhibition of the excision of the same elements in the zygotic macronucleus. These experiments show that the processing of many germ-line sequences in the developing macronucleus is sensitive to the structure and copy number of homologous sequences in the maternal macronucleus. The generality and sequence specificity of this trans-nuclear, epigenetic regulation of rearrangements suggest that it is mediated by pairing interactions between germ-line sequences and sequences imported from the maternal macronucleus.     

Antigenic Differences Among Epimastigotes,Amastigotes and Trypomastigotes of Trypanosoma cruzi*

Antigenic differences were demonstrated among trypomastigotes, amastigotes, and epimastigotes of Trypanosoma cruzi by the indirect fluorescent antibody method. Tests using cross-absorbed sera were included in the study.