Taxonomy of the African giant pouched rats (Nesomyidae: Cricetomys): molecular and craniometric evidence support an unexpected high species diversity

Our study combined a mitochondrial cytochrome b phylogeny with cranial measurements from giant pouched rats collected across sub‐Saharan Africa. The mitochondrial phylogeny resolves two West African clades and a clade with east and central Africa representatives. This last clade can be further divided into four subclades. Altogether they represent six species (Cricetomys gambianus, Cricetomys ansorgei, Cricetomys emini, and three undescribed taxa) that can be distinguished on the basis of their mitochondrial DNA sequences and craniometry. In the absence of adequate craniometric data the existence of Cricetomys kivuensis cannot be confirmed by our data. Our combined molecular and craniometric data allowed us to broadly delineate the distribution ranges of the detected species. Cricetomys gambianus occurs in the savannah and forest clearings of West Africa. Cricetomys ansorgei is distributed in the savannah of East and southern Africa. Cricetomys emini, as currently recognized across the Guineo‐Congolian forest of Africa, is shown to be diphyletic. Cricetomys sp. 1, a separate operational taxonomic unit closely resembling C. emini, occurs in the forest zone of West Africa. An undescribed sister‐species of C. ansorgei, Cricetomys sp. 2, occurs in the forest of Central Africa along the left bank of the Congo River. Cricetomys sp. 3 occurs on the right bank of the Congo River from Cameroon to the Republic of Congo, whereas the true C. emini also occurs on the right bank of the Congo River but appears to be restricted to the Democratic Republic of Congo. Cranial phenotype within the genus tends to conform to ecological zonation (either forest or savannah) rather than to phylogenetic affiliation of the species concerned, suggesting that diversifying selection across environmental gradients could be responsible for biological diversification within the genus.     

Phylogeography of lions (Panthera leo ssp.) reveals three distinct taxa and a late Pleistocene reduction in genetic diversity

Lions were the most widespread carnivores in the late Pleistocene, ranging from southern Africa to the southern USA, but little is known about the evolutionary relationships among these Pleistocene populations or the dynamics that led to their extinction. Using ancient DNA techniques, we obtained mitochondrial sequences from 52 individuals sampled across the present and former range of lions. Phylogenetic analysis revealed three distinct clusters: (i) modern lions, Panthera leo ; (ii) extinct Pleistocene cave lions, which formed a homogeneous population extending from Europe across Beringia (Siberia, Alaska and western Canada); and (iii) extinct American lions, which formed a separate population south of the Pleistocene ice sheets. The American lion appears to have become genetically isolated around 340 000 years ago, despite the apparent lack of significant barriers to gene flow with Beringian populations through much of the late Pleistocene. We found potential evidence of a severe population bottleneck in the cave lion during the previous interstadial, sometime after 48 000 years, adding to evidence from bison, mammoths, horses and brown bears that megafaunal populations underwent major genetic alterations throughout the last interstadial, potentially presaging the processes involved in the subsequent end-Pleistocene mass extinctions.     

The effect of breeding status on the timing of moult in Mute Swans Cygnus olor

It is well known that in breeding Mute Swans Cygnus olor males initiate moult 4–6 weeks after their mate, and that in non-breeding flocks males and females moult at about the same time. Here we show that mated pairs that have lost their young moult at the same time, implying that the male is able to avoid the delay in moult at very short notice.     

Rhythmic Growth Rings of Wood and Their Relationship with the Foliage in Oak Seedlings Grown in a Favourable Environment

The anatomy of wood was studied inQuercus roburL. andQuercussuberL. seedlings exhibiting 3–8 units of extension, eachwith a tier of photosynthesizing leaves in their upper parts,generated as the result of rhythmic shoot growth under favourableconditions. At all the axis levels examined (i.e. the base ofeach of the different units of extension, four other equidistantlevels within the first unit of extension and the upper partof the taproot), the wood displayed rings when treated withWiesner reagents. This indicated cinnamaldehyde groups presentin lignins. No rings appeared when the Maüle reaction wasused for specific detection of syringyl subunits in lignins.A trend towards a periodical arrangement of xylem parenchymabands was also found when sections were treated with I₂/KI.The number of rings coincided with the number of leaf tiersabove the level of measurement, and did not vary inside thefirst unit of extension. Thus, the rings are called rhythmicgrowth rings. In sections of the first and the second unitsof extension, and in the taproot, the area and width of a givenrhythmic growth ring were highly correlated with the total areaof leaves present above the level of measurement at the presumedtime of growth ring formation. Moreover, stem diameter at thebase of the units of extension was highly correlated with theleaf area above. These results indicate that differentiationof xylem, particularly its lignification, varies rhythmicallyin oak seedlings. They imply that wood production is linkedto the photosynthesizing and/or transpiring area of the plant.Thus, during a growth cycle ofQ. roburandQ. suberseedlings,there appears to be integration of the primary metabolic activitieswith the laying down of rhythmic growth rings.Copyright 1998Annals of Botany Company Allometric relationship, juvenile wood, leaf area, lignification, oak seedling, periodic structure,Quercus roburL.,Quercus suberL., rhythmic growth ring, unit of extension.     

A PANEL PERFORMANCE PROCEDURE IMPLEMENTED IN R

Monitoring performance is essential for the efficient use of a sensory panel both during training and while carrying out product assessments. We present a concise procedure to monitor panel performance based on classical statistical methods. The program includes tests for the ability to discriminate between products, repeatability of assessments, scale use, agreement between panelists and a principal component analysis map of panelist means across attributes. The algorithm is implemented in R – a state‐of‐the‐art, freely available statistical software package. The program output is summarized in graphs and tables. This easily applicable panel performance procedure is aimed at improving sensory practice, especially in areas where the use of highly complex systems is not feasible.     

The Challenge of Pneumocystis carinii Culture1

ABSTRACT. Published and unpublished data on the cultivation of P. carinii were reviewed by a panel of investigators convened by the National Institutes of Health. Although several cell culture systems allow propagation of P. carinii for a limited time with modest rates of replication, these have not proved adequate for isolation of P. carinii in sufficient quantity to explore important basic biological investigation. Attempts at cell-free culture have yielded only transient proliferation. Because much of the unsuccessful work on cultivation of the organism has been unpublished, the panel agreed that these data may be useful to other investigators in designing experimental strategies for cultivation. Therefore, the purpose of this report is to make available this information to researchers, lest others unknowingly repeat unsuccessful methods. It is hoped that by documenting the history and the complexities of Pneumocystis culture, renewed interest and efforts will be directed toward this fundamental scientific challenge.     

Hormones in Plants Bearing Nitrogen-fixing Root Nodules: Distribution and Seasonal Changes in Levels of Cytokinins in Alnus glutinosa (L.) Gaertn

The root nodules of both dormant and non-dormant plants of Alnusglutinosa (L.) Gaertn. were found (by the soybean callus bioassay)to contain levels of cytokinin activity greatly exceeding thoseof other parts of young vegetative plants. A large, transient increase in cytokinin activity occurred inthe nodules at the time of bud break. Similar, although muchsmaller, increases were detected also in roots and buds. Theincrease in the level of nodule cytokinin activity was observedboth in mature trees and in young pot-grown plants in two successiveyears. A second peak of cytokinin activity, considered to bederived from cytokinin nucleotides, was found in the nodulesof mature trees in midsummer. Analysis of cytokinin extracts of different plant parts by meansof a Sephadex LH20 column revealed the presence of three mainpeaks of activity, with elution volumes corresponding to thoseof zeatin-9-glucoside, zeatin riboside, and zeatin. While theglucoside-like peak -was predominant in the nodules and leavesit was not detected in root pressure sap. A zeatin ribo-side-likepeak was the major cytokinin in the roots and root pressuresap. These findings are discussed in relation to current hypothesesconcerning the production, distribution, and possible physiologicalroles of the cytokinins.