Improved long-term temperature prediction by chaining of neural networks

When an artificial neural network (ANN) is trained to predict signals p steps ahead, the quality of the prediction typically decreases for large values of p. In this paper, we compare two methods for prediction with ANNs: the classical recursion of one-step ahead predictors and a new kind of chain structure. When applying both techniques to the prediction of the temperature at the end of a blast furnace, we conclude that the chaining approach leads to an improved prediction of the temperature and avoidance of instabilities, since the chained networks gradually take the prediction of their predecessors in the chain as an extra input. It is observed that instabilities might occur in the iterative case, which does not happen with the chaining approach. To select relevant inputs and decrease the number of weights in this approach, Automatic Relevance Determination (ARD) for multilayer perceptrons is applied.     

Aerial Nodules in Casuarina cunninghamiana

A complete survey of La Réunion Island showed that, in 40- to 50-year-old Casuarina cunninghamiana plantations located in the northeast at an altitude above 400 m, some trees bore aerial nodules as high as 6 to 7 m up the trunk. The nodules exhibited a significant specific acetylene reduction by the ARA method (0.77 μmol of C₂H₄ per h/g [dry weight] of nodule) at the time of sampling (June 1990). Aerial nodules were also found on a Casuarina glauca trunk. Preliminary observations show that anatomically aerial and underground nodules do not differ significantly. In addition to host plant genetic determinants, aerial nodule formation is assumed to require sufficient rainfall, an abundance of Frankia spp. in the soil and air, and rhytidome on the tree trunk.     

Nitrogen-fixing potential of micropropagated clones of Acacia mangium inoculated with different Bradyrhizobium spp. strains

Five A. mangium seedlings of different shoot lengths were selected from a 600-seed screening experiment and micropropagated. Two-week-old rooted microcuttings of the 5 micropropagated clones were inoculated with 3 specific Bradyrhizobium spp. strains in 15 combinations. After 5 months of growth, nodule dry weight and shoot dry weight data showed significant effects of clone and Bradyrhizobium spp. strain. Clones RR-G₁ and IR-M₂ and Bradyrhizobium sp. Aust13c resulted in the highest dry-matter production and most efficient nodulation. No interaction was observed between clone and Bradyrhizobium spp. strain, which indicates that the Bradyrhizobium spp. strain and the host plant can be selected separately.     

Root culturing ofFaidherbia=Acacia albida as a source of explants for shoot regeneration

Root culture ofFaidherbia=Acacia albida (Del.) A. Chev. can be maintained over several months by successively subculturing excised roots in modified Bonner and Devirian medium, which was found to be the best of the three media compositions tested. Adding auxins had an inhibiting effect on root growth characteristics. Mesoinositol at 0.05 mM slightly enhanced the overall elongation rate, and sucrose at 59 mM significantly increased root elongation. The effect of sucrose could not be replaced by glucose. Subcultured roots showed progressively less elongation in successive transfers. Shoots were regenerated in vitro from root segments beginning with the first passage on 1/5 strength MS medium.The large variability in the root elongation rate indicates that this technique provides an effective way to select clones with good potential for tap root growth.     

Propagation of Casuarina equisetifolia through axillary buds of immature female inflorescences cultured in vitro

The study of the actinorhizal symbiosis in Casuarina equisetifolia requires an homogenous plant material. Consequently, we devised a method of micropropagation based on the use of immature female inflorescences (IFI) as explants. IFI excised from an adult tree formed multiple buds after 4-week incubation on Murashige and Skoog medium with 0.05 mol 1^–1 NAA and 11.1 mol 1^–1 BAP. The axillary buds evolved into 5–6 cm long shoots 5 weeks after the transfer of IFI on a similar medium except for the addition of activated charcoal. Rooting of the shoots was obtained on a third medium, without BAP or charcoal, but with 1 mol 1^–1 NAA. The plantlets were transferred into soil. Their growth was satisfactory and no plagiotropic tendency was observed.Abbreviations BAP 6-benzylaminopurine - 2,4-D 2,4-dichlorophenoxyacetic acid - IAA 3-indoleacetic acid - IFI immature female inflorescences - NAA -naphtaleneacetic acid     

Genetic transformation of the actinorhizal tree Allocasuarina verticillata by Agrobacterium tumefaciens

We have developed an efficient transformation system for the tropical actinorhizal tree Allocasuarina verticillata using Agrobacterium tumefaciens mediated gene transfer. Mature zygotic embryos were inoculated with the disarmed strain C58C1 carrying, in the binary vector BIN19, the nptll gene, providing kanamycin resistance as a selectable marker, and the reporter gene β-glucuronidase containing an intron. The transformed embryos were cultivated on nutrient medium supplemented with 0.5 µM NAA, 2.5 µM BA, 100 mg l⁻¹ kanamycin and 250 mg l⁻¹ cefotaxime. After 2 months, a 21% transformation frequency was obtained. Within 6–9 months, transgenic plants were recovered from 70% of the transformed calli. The presence of the transgenes was demonstrated by PCR analysis and by the expression of the β-glucuronidase; integration of the T-DNA was confirmed by Southern hybridization. More than 100 transgenic plants from a total of 23 independent transformation events have been successfully established in soil. The possibility to obtain nitrogen-fixing nodules after inoculation of transgenic A. verticillata plants by the actinomycetal strain of Frankia Allo2 was established.     

Refinement of 1p36 alterations not involving PRDM16 in myeloid and lymphoid malignancies

Fluorescence in situ hybridization was performed to characterize 81 cases of myeloid and lymphoid malignancies with cytogenetic 1p36 alterations not affecting the PRDM16 locus. In total, three subgroups were identified: balanced translocations (N = 27) and telomeric rearrangements (N = 15), both mainly observed in myeloid disorders; and unbalanced non-telomeric rearrangements (N = 39), mainly observed in lymphoid proliferations and frequently associated with a highly complex karyotype. The 1p36 rearrangement was isolated in 12 cases, mainly myeloid disorders. The breakpoints on 1p36 were more widely distributed than previously reported, but with identifiable rare breakpoint cluster regions, such as the TP73 locus. We also found novel partner loci on 1p36 for the known multi-partner genes HMGA2 and RUNX1. We precised the common terminal 1p36 deletion, which has been suggested to have an adverse prognosis, in B-cell lymphomas [follicular lymphomas and diffuse large B-cell lymphomas with t(14;18)(q32;q21) as well as follicular lymphomas without t(14;18)]. Intrachromosomal telomeric repetitive sequences were detected in at least half the cases of telomeric rearrangements. It is unclear how the latter rearrangements occurred and whether they represent oncogenic events or result from chromosomal instability during oncogenesis.     

Sequential analysis of nuclei transformation in stem nodulation sites ofSesbania rostrata Bbem (Leguminosae) during infection by specificrhizobium

This paper is a sequential analysis of qualitative and quantitative nuclear evolution inSesbania rostrata (Leguminosae) stem nodules. Before infection, the nuclei of the root primordia (nodulation site) cells show a 2G level of DNA. Immediately upon infection, the cells cease their mitotic activity and the nuclei begin synthesizing DNA up to a 32C level after the onset of the infection. The increase in the diameter of the nuclei of the infected cells is concomitant with the rise in the level of DKA. In the final phase of the evolution of these nodules, the nuclei of the infected cells undergo degenerative changes.     

Choosing a reporter for gene expression studies in transgenic actinorhizal plants of the Casuarinaceae family

Transgenic Casuarinaceae and reporter genes provide valuable tools to study gene expression in transgenic actinorhizal nodules. In this paper, we discuss the use of ß-glucuronidase for the histochemical localization and quantification of gene expression in transgenic plants of Allocasuarina verticillata and Casuarina glauca nodulated by the actinomycete Frankia. We also report on the genetic transformation of A. verticillata by the Agrobacterium tumefaciens strain C58C1(pGV2260) containing the 35S-mgfp5-ER construct encoding a modified green fluorescent protein of Aequorea victoria in a binary vector. The evolution of the GFP fluorescence was monitored through all stages of the regeneration process. The data indicate that GFP is not toxic in Casuarinaceae and that this reporter gene can be used for visual screening of transformed calli and transgenic plants. The fluorescence pattern of gfp provides a new tool for monitoring in vivo transgene expression in actinorhizal plants.