The specification and maintenance of renal cell types by epigenetic factors

The specification of cell lineages and patterning in the embryo occurs sequentially as specific regions are increasingly restricted in their developmental fates. When and how this occurs is still not entirely clear. Nevertheless, the roles of epigenetic regulatory genes in partitioning the genome into active and inactive domains is evident in a variety of organisms and is highly conserved through evolution. The function of Pax2 in the kidney has been inferred by the phenotypic analysis of loss-of-function mutants in mice, fish and humans. Although Pax2 and the related gene, Pax8, are essential for early intermediate mesoderm specification and are found in the epithelial lineage arising from that mesoderm, how these proteins regulate cell lineage restriction and gene expression patterns has remained obscure. Our recent data, suggests that Pax proteins help establish chromatin domains within cell lineages by providing the locus and tissue specificity for epigenetic imprinting complexes that modify histones. The novel protein PTIP is a key adaptor that links Pax proteins and possibly many other types of DNA binding proteins to a histone H3K4 methyltransferase complex. Given the prevalence of Pax2 expression in kidney development and in kidney disease, we now need to address the effects of epigenetics on renal disease states, on the stability of the terminal epithelial phenotype, and in the aging cell.Key words: kidney development, Pax2, PTIP, histone methyltransferase     

Chromosome numbers of the flora of Germany—a new online database of georeferenced chromosome counts and flow cytometric ploidy estimates

Chromosomal speciation processes gain increasing attention in plant systematics and evolution, and new approaches revealed a high diversity in chromosome numbers even within recognized taxa. Reliable counts linked to known accessions are thus needed yet often hardly available. We present a new online database for chromosome counts and ploidy estimates of the flora of Germany with a detailed documentation of the examined material, and its sampling locality. The chromosome database builds upon a relational database and includes standardized taxon identification, study date, georeferenced locality and additional collection as well as publication details from which the karyological information was extracted. In order to reach the best compatibility with other botanical publications of the study region, taxonomic concepts and nomenclature follow the “Rothmaler”, a widely accepted field flora of vascular plants in Germany. Our online database is available at http://chromosomes.senckenberg.de. The site consists of the main page with project information, a search tool, an interactive map display, a contact and a data submission form. The zoomable map shows the localities of the search result, allows to refine the geographic search as well as to select individual data points.     

The relationship between zinc and copper status and lipid levels in African-Americans

Studies examining the role of zinc and copper nutriture as risk factors for cardiovascular disease in European Americans have produced conflicting results. This study assessed the associations between zinc and copper status and serum lipid levels in an adult African-American community. A cross-sectional study was conducted on 600 individuals (233 males, 367 females) from 25 to 65 yr of age using a random sampling design in a small city in Alabama. Anthropometric, dietary, and serum zinc, copper, and lipid measurements were made. The mean serum zinc and copper levels and dietary zinc intake were similar to that reported previously for European Americans. There were no significant associations between serum zinc, copper, or zinc/copper ratio and total serum cholesterol, high-density lipoprotein cholesterol (HDL-C), low-density lipoprotein cholesterol (LDL-C), or triglyceride levels. For males, there was a small but significant association between dietary zinc and the total cholesterol/HDL-C ratio (r=−0.17, p=0.03). Similarly, females taking either zinc supplements or a multivitamin including zinc had higher HDL-C values than nonsupplementing females. Further prospective studies of the relationship between zinc status and lipid levels in African Americans are needed to verify these results.     

Expression of the VEGF receptor-3 in osteoarthritic chondrocytes: stimulation by interleukin-1β and association with β<Subscript>1</Subscript>-integrins

Recent studies have demonstrated enhanced expression of vascular endothelial growth factor and vascular endothelial growth factor receptor (VEGFR)-1 and -2 in chondrocytes of rheumatoid and osteoarthritic cartilage. Since expression of VEGFR-3 (Flt-4) in chondrocytes has not yet been investigated, we studied the distribution of VEGFR-3 in osteoarthritic cartilage samples by immunohistochemistry and immunoelectron microscopy. Furthermore, we looked for functional colocalization of VEGFR-3 with the signal transduction receptor ₁-integrin. Superficial osteoarthritic chondrocytes exhibited VEGFR-3 expression in the cytoplasm and on the cell membrane. Using western blotting we could demonstrate that interleukin-1 (IL-1) stimulates the expression of VEGFR-3 in chondrocytes in vitro in a dose-dependent manner. By coimmunoprecipitation assay we found a functional complex between the ₁-integrin and VEGFR-3 in IL-1-stimulated chondrocytes indicating that activated VEGFR-3 may interact with ₁-integrin and associated subcellular pathways in osteoarthritic chondrocytes. Taken together with results of previous studies showing that ₁-integrins were also associated with other surface receptors and proteins in chondrocytes that cause cartilage destruction in arthritis (for example, urokinase-type plasminogen activator receptor and matrix metalloproteinases), we can hypothesize that signal transduction by these receptor complexes via ₁-integrins may play a crucial role in pathogenesis of osteoarticular disorders. Further work needs to be done to elucidate downstream signaling events activated by these receptors.     

Divergent genome sizes reflect the infrafamilial subdivision of the neotropical woody Marcgraviaceae

Neotropical Marcgraviaceae comprise about seven genera and 130 species of lianas and shrubs. They predominantly occur in lowland or montane rainforests and are characterized by a variety of pollination systems. Early classifications subdivided Marcgraviaceae into subfamilies Marcgravioideae and Noranteoideae, a concept supported by molecular data. Using flow cytometry and chromosome numbers, we investigated the role of genome size and polyploidization in the evolution of Marcgraviaceae and how genome sizes are distributed between the proposed infrafamilial groups. To do this we determined genome sizes and chromosome counts for six genera and 22 species for the first time. Our study supports the subfamilial classification of the family, revealing contrasting genome sizes in Noranteoideae (2C = 5.5–21.5 pg) and Marcgravioideae (2C = 2.3–6.2 pg). Polyploidy is considered to be the main source of genome size variation as in each subfamily the higher nuclear DNA amounts were associated with higher ploidy. In addition, genome size changes independent of polyploidy were also observed in some genera, suggesting an additional role for changes in repetitive DNA abundance in the evolution of Marcgraviaceae. A high chromosome base number (x = 18; 2n = 36 to ～70) points to an undetected lower diploid level or to palaeopolyploidy. Marcgraviaceae show a remarkable (nine‐fold) variation in genome size, and several Noranteoideae have genome sizes among the highest reported for tropical woody angiosperms worldwide. © 2014 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 177 , 1–14.     

Plasma TNF-α and Soluble TNF Receptor Levels after Doxorubicin with or without Co-Administration of Mesna—A Randomized,Cross-Over Clinical Study

Purpose

Chemotherapy-induced cognitive impairment (CICI) is a common sequelae of cancer therapy. Recent preclinical observations have suggested that CICI can be mediated by chemotherapy-induced plasma protein oxidation, which triggers TNF-α mediated CNS damage. This study evaluated sodium-2-mercaptoethane sulfonate (Mesna) co-administration with doxorubicin to reduce doxorubicin-induced plasma protein oxidation and resultant cascade of TNF-α, soluble TNF receptor levels and related cytokines.

Methods

Thirty-two evaluable patients were randomized using a crossover design to receive mesna or saline in either the first or second cycle of doxorubicin in the context of a standard chemotherapy regimen for either non-Hodgkin lymphoma or breast cancer. Mesna (360 mg/m²) or saline administration occurred 15 minutes prior and three hours post doxorubicin. Pre-treatment and post-treatment measurements of oxidative stress, TNF-α and related cytokines were evaluated during the two experimental cycles of chemotherapy.

Results

Co-administration of mesna with chemotherapy reduced post-treatment levels of TNF-related cytokines and TNF-receptor 1 (TNFR1) and TNF-receptor 2 (TNFR2) (p = 0.05 and p = 0.002, respectively). Patients with the highest pre-treatment levels of each cytokine and its receptors were the most likely to benefit from mesna co-administration.

Conclusions

The extracellular anti-oxidant mesna, when co-administered during a single cycle of doxorubicin, reduced levels of TNF-α and its receptors after that cycle of therapy, demonstrating for the first time a clinical interaction between mesna and doxorubicin, drugs often coincidentally co-administered in multi-agent regimens. These findings support further investigation to determine whether rationally-timed mesna co-administration with redox active chemotherapy may prevent or reduce the cascade of events that lead to CICI.

Trial Registration

clinicaltrials.gov NCT01205503.     

Chiral crystallization of glutamic acid on self assembled films of cysteine

In this article, we describe the preparation and use of chiral surfaces derived from enantiomerically pure crystals of amino acids. For this purpose, we chose to employ a self-assembly process to grow nanoscale chiral films of (+)-L or (-)-D cysteine, onto gold surfaces. We utilized those chiral films as resolving auxiliaries in the crystallization of enantiomers from solutions. To demonstrate the chiral discriminating ability of the chiral surfaces in crystallization processes, we investigated the crystallization of rac-glutamic acid onto the chiral films. Our study demonstrates the potential application of chiral films to control chirality throughout crystallization, where one enantiomer crystallizes on the chiral surfaces with relatively high enantiomeric excess. In addition, crystallization of pure glutamic acid enantiomers, and its racemic compound on to chiral films resulted in crystal morphology modification with preferred crystal orientation, which assists in the interpretation of the ability of our chiral surfaces to function as chiral selectors.