A phylogenetic and functional perspective on the origin and evolutionary shifts of growth ring anatomical markers in seed plants

We reconstruct the evolutionary changes in different anatomical markers in order to understand the evolution and functional aspects of growth rings during the diversification of seed plants (spermatophytes), one of the largest and most diverse lineages of the tree of life. We carried out a wide revision of the anatomy of secondary xylem in spermatophytes and reconstructed the evolution of the different anatomical markers in a time-calibrated phylogeny. By embodying a functionally and evolutionarily significant concept in growth rings we reveal a new panorama for their frequency and show how common they are in diverse lineages of tropical plants. In this context, the principal anatomical markers of growth rings are identified in the evolutionary history of plants and their association with climate-related ecological characteristics. We discuss the function of these anatomical markers, especially for thick-walled and/or radially flattened latewood fibres, fibre zone and dilated rays. Despite the high evolutionary lability of the anatomical markers evidenced by our analyses, they appear to represent deep homologies.     

Design, synthesis and stability of N-acyloxymethyl- and N-aminocarbonyloxymethyl-2-azetidinones as human leukocyte elastase inhibitors

A series of N-acyloxymethyl- and N-aminocarbonyloxymethyl derivatives of 2-azetidinones, 3, with different substituent patterns at the beta-lactam C-3 and C-4 positions, were designed as potential mechanism-based inhibitors for human leukocyte elastase and found to exhibit inhibitory potency and selectivity for the enzyme.     

Lipid-based colloidal carriers for peptide and protein delivery--liposomes versus lipid nanoparticles

This paper highlights the importance of lipid-based colloidal carriers and their pharmaceutical implications in the delivery of peptides and proteins for oral and parenteral administration. There are several examples of biomacromolecules used nowadays in the therapeutics, which are promising candidates to be delivered by means of liposomes and lipid nanoparticles, such as solid lipid nanoparticles (SLN) and nanostructured lipid carriers (NLC). Several production procedures can be applied to achieve a high association efficiency between the bioactives and the carrier, depending on the physicochemical properties of both, as well as on the production procedure applied. Generally, this can lead to improved bioavailability, or in case of oral administration a more consistent temporal profile of absorption from the gastrointestinal tract. Advantages and drawbacks of such colloidal carriers are also pointed out. This article describes strategies used for formulation of peptides and proteins, methods used for assessment of association efficiency and practical considerations regarding the toxicological concerns.     

Dynamic energy budget theory restores coherence in biology

We present the state of the art of the development of dynamic energy budget theory, and its expected developments in the near future within the molecular, physiological and ecological domains. The degree of formalization in the set-up of the theory, with its roots in chemistry, physics, thermodynamics, evolution and the consistent application of Occam's razor, is discussed. We place the various contributions in the theme issue within this theoretical setting, and sketch the scope of actual and potential applications.     

Combined effects of air and soil pollution by fluoride emissions on Tibouchina pulchra Cogn., at Cubatão,SE Brazil,and their relations with aluminium

High deposition of gaseous/particulate fluorides and other air pollutants has resulted in an acidification and probable formation of soluble AlF_x complexes in the soil in the vicinity of the industrial complex of Cubatão, SE Brazil. With the present field study we aimed at determining the contribution of F and Al uptake from fluoride-contaminated soil, supposedly as AlF_x complexes, to the increase of foliar F and Al contents in saplings of an Al-accumulator tree species (Tibouchina pulchra) which were concomitantly exposed to fluoride-contaminated air and also the proportional contribution of both air and soil contamination to the mentioned foliar accumulation of these elements. The seasonal variations in F and Al accumulation and possible metabolic changes in the plants due to F and Al accumulation were also investigated. The saplings were exposed during three consecutive periods of 16 weeks to: (a) air and soil from a reference site (PV_noF); (b) air or soil from two polluted sites (CM-high air pollution, low F and MV-high air pollution, high F); and (c) both air and soil from these polluted sites. After exposure, the changes in the foliar concentrations of F and Al, the relations between both element contents and their relationships with oxidative stress indicators were determined. The data were grouped in three matrices: PV_noF–CM_lwF and PV_noF–MV_hgF, taking in account the possible air/soil exposure combinations in each, and soil/air from all sites. The slight F accumulation in plants of PV_noF–CM_lwF matrix was a result of higher uptake from soil than from air (54 and 46%, respectively). At PV_noF–MV_hgF matrix, the extremely high F accumulation in leaves of T. pulchra could be attributed to the combination of both air and soil contamination (83 and 17%, respectively). T. pulchra always showed higher foliar Al concentrations than 1000 g g^–1 dry mass, mainly after exposure to air and soil of both polluted sites (CM_lwF and MV_hgF). A highly significant linear regression was estimated between molar Al and F contents, taking in account the data obtained for saplings of T. pulchra cultivated in the different soils and exposed to ambient air of PV_noF, suggesting that both elements were taken as Al–F complexes from soil. The uptake of fluorides from air and/or soil of MV_hgF caused significant metabolic changes in T. pulchra, but visible injury supposedly induced by fluorides were observed only when the foliar F contents surpassed 700 g g^–1 dry mass. On the contrary, Al did not cause any metabolic stress to the plants.     

Ferulic acid uptake by soybean root in nutrient culture

Ferulic acid uptake by soybean root in nutrient culture was investigated by the depletion method at different concentrations, temperatures and pH. Results showed that soybean roots absorbed this compound at greater rates in the concentrations between 0.05-mM and 1.0-mM and it was concentration dependent. Ferulic acid uptake was unaffected at pH 4.5 or 6.0 but reduced at pH 7.0. At pH 6.0, uptake rates decreased significantly with increasing temperature of nutrient solution.     

highroad Is a Carboxypetidase Induced by Retinoids to Clear Mutant Rhodopsin-1 in Drosophila Retinitis Pigmentosa Models

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Population Structure and Genetic Diversity of Common Bean Accessions from Brazil

Plant Molecular Biology Reporter - Brazil can be considered a secondary center of common bean diversification (Phaseolus vulgaris L.), and the landraces grown throughout Brazil are valuable sources...     

Binding of TPX2 to Aurora A alters substrate and inhibitor interactions

The Aurora kinases are a family of serine/threonine kinases involved in mitosis. The expression of AurA is ubiquitous and cell cycle regulated. It is overexpressed in many tumor types, including breast, colon, and ovarian. TPX2 is a binding partner and activator of AurA. A fragment of TPX2 (residues 1-43) has been shown to be sufficient for binding, kinase activation, and protection from dephosphorylation. We have shown that the addition of TPX2(1-43) increases the catalytic efficiency of AurA. While TPX2 binding has no effect on the turnover number of AurA and does not change the reaction mechanism (characterized here to be a rapid equilibrium random mechanism), it increases the binding affinity of both ATP and a peptide substrate. We have also demonstrated differences in the inhibitor structure-activity relationship (SAR) in the presence or absence of TPX2(1-43). To better understand the differential SAR, we carried out computer modeling studies to gain insight into the effect of TPX2 on the binding interactions between AurA and inhibitors. Our working hypothesis is that TPX2 binding decreases the size and accessibility of a hydrophobic pocket, adjacent to the ATP site, to inhibitors.