High-yield recovery of recombinant DNA from poorly growing cosmid and lambda genomic clones.

Certain genomic sequences cannot be recovered efficiently in cosmid or lambda bacteriophage clones, presenting a barrier to efforts to construct a contiguous cloned library of a genome. We have encountered such sequences during our efforts to isolate cosmid and bacteriophage lambda clones carrying members of the human type 2 cystatin gene family. Several cosmid clones constructed in the pWE 15 vector did not survive purification, and using standard techniques, we were unable to obtain significant amounts of cosmid DNA from those clones we could purify. Similarly, several lambda bacteriophage clones constructed in the lambda DASH II vector could not be purified, and those lambda clones we were able to isolate gave low titers in liquid lysates. In this paper, we describe generally applicable methods for preparing high yields of recombinant DNA from such recalcitrant cosmid and lambda clones constructed in these vectors.     

Oskar organizes the germ plasm and directs localization of the posterior determinant nanos

Oskar is one of seven Drosophila maternal-effect genes that are necessary for germline and abdomen formation. We have cloned oskar and show that oskar RNA is localized to the posterior pole of the oocyte when germ plasm forms. This polar distribution of oskar RNA is established during oogenesis in three phases: accumulation in the oocyte, transport toward the posterior, and finally maintenance at the posterior pole of the oocyte. The colocalization of oskar and nanos in wild-type and bicaudal embryos suggests that oskar directs localization of the posterior determinant nanos. We propose that the pole plasm is assembled stepwise and that continued interaction among its components is required for germ cell determination.     

Local names for vascular plants in the John Crow mountains,Jamaica

Local names of vascular plants, accompanied by botanical specimens, were collected in the John Crow Mountains, Portland Parish, Jamaica. Each of the names was volunteered by one local informant; many were independently corroborated by others. We recorded 91 names of forest trees and shrubs, 20 names of climbers, and 33 names of other plants. The uneven distribution of local names among different categories of plants is discussed. The names are mostly of English origin, with a scattering from Spanish, Amerindian and West African languages. Many names are not listed in the standard floras; 20 names are apparently hitherto unrecorded in print. The same name was often found to be applied to a different species from the usage given in the floras, showing the variation in vernacular names from one part of the island to another.     

Photoaffinity labeling of mammalian alpha 1-adrenergic receptors. Identification of the ligand binding subunit with a high affinity radioiodinated probe

We have synthesized and characterized a novel high affinity radioiodinated alpha 1-adrenergic receptor photoaffinity probe, 4-amino-6,7-dimethoxy-2-[4-[5-(4-azido - 3 - [125I]iodophenyl) pentanoyl] - 1 - piperazinyl] quinazoline. In the absence of light, this ligand binds with high affinity (KD = 130 pM) in a reversible and saturable manner to sites in rat hepatic plasma membranes. The binding is stereoselective and competitively inhibited by adrenergic agonists and antagonists with an alpha 1-adrenergic specificity. Upon photolysis, this ligand incorporates irreversibly into plasma membranes prepared from several mammalian tissues including rat liver, rat, guinea pig, and rabbit spleen, rabbit lung, and rabbit aorta vascular smooth muscle cells, also with typical alpha 1-adrenergic specificity. Autoradiograms of such membrane samples subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis reveal a major specifically labeled polypeptide at Mr = 78,000-85,000, depending on the tissue used, in addition to some lower molecular weight peptides. Protease inhibitors, in particular EDTA, a metalloprotease inhibitor, dramatically increases the predominance of the Mr = 78,000-85,000 polypeptide while attenuating the labeling of the lower molecular weight bands. This new high affinity radioiodinated photoaffinity probe should be of great value for the molecular characterization of the alpha 1-adrenergic receptor.     

Electron paramagnetic resonance of single crystal deoxycobaltohemoglobin

Single crystals of horse ^CoHb were obtained by reduction of ^CoHb⁺ crystals with dithionite. Epr measurements showed that the g? and ^Coà tensors are both axial and share the same principal axis systems. Of the four subunits, the “heme” normals of C? and d? subunits ãb?plane 29 ± 1° from b?; they have the same orientation as the hemes in methemoglobin. The normals of “hemes” à and B? are 47 above the ãb? plane as compared to 16° in methemoglobin.     

Quantitative floral development in Pseudolysimachion (Scrophulariaceae): intraspecific variation and comparison with Veronica and Veronicastrum

Intraspecific variation in floral development was studied in four morphologically distinct strains of Pseudolysimachion longifolium and two of P. spicatum. Size increase of whole buds from living plants of P. longifolium was followed in absolute time. Growth rates were homogeneous within inflorescences and within individual plants, and significantly different between individual plants. Organ growth trajectories (plotted as organ size over gynoecium size) differed little among individuals of Pseudolysimachion belonging to morphologically distinct strains; variation was most pronounced in the calyx. Corolla tube as well as calyx and corolla lobe measurements varied more during the early stages of development than near maturity, suggesting constraints on mature flower form. In addition to intraspecific variation, floral development in Pseudolysimachion was compared with that in related Veronica chamaedrys and Veronicastrum virginicum, using data from a previous study. Mature flowers of Pseudolysimachion have long corolla tubes similar to those of Veronicastrum and long corolla lobes similar to those of Veronica. The trajectories of most organs of Pseudolysimachion were intermediate between those of Veronica and Veronicastrum in position as well as in type of curve, i.e., different trajectories lead to similar end products; thus, the shapes of the mature organs are not strictly homologous and not indicative of close relationship.     

Evolution of regulatory genes and patterns: Relationships to evolutionary rates and to metabolic functions

In an effort to understand the forces shaping evolution of regulatory genes and patterns, we have compared data on interspecific differences in enzyme expression patterns among the rapidly evolving Hawaiian picture-winged Drosophila to similar data on the more conservative virilis species group. Divergence of regulatory patterns is significantly more common in the former group, but cause and effect are difficult to discern. Random fixation of regulatory variants in small populations and/or during speciation may be somewhat more likely than divergence driven by selection. Within the picture-winged group, we also have compared enzymes that fulfill different metabolic roles. There are highly significant differences between individual enzymes, but no obvious correlations to functional categories. Correspondence to: W.J. Dickinson     

CONSERVATION OF MOLECULAR PREPATTERNS DURING THE EVOLUTION OF CUTICLE MORPHOLOGY IN DROSOPHILA LARVAE

We are using patterns of cuticle specialization in Drosophila larvae as models to investigate the molecular, genetic, and developmental bases of morphological evolution. Members of the virilis species group differ markedly from one another in the distribution of hairs on the dorsal surface of first instar larvae. In particular, characteristic bands of hairs cover about 20% of each trunk segment in some species but about 70% in others. These major types do not correlate with recently proposed phylogenetic relationships, suggesting that similar phenotypes have arisen independently in different lineages. The patterns of expression of several genes that control or reflect intrasegmental patterning are indistinguishable in species with very different cuticle morphologies. We conclude that, in this case, morphology probably has evolved via altered response to a conserved molecular prepattern.     

Biological traits and living conditions of Maya Indian and non Maya girls from Merida,Mexico

A total of 522 girls and their families from low and middle social strate were examined in the northern part of Merida (Yucatan) during 1988 and 1989. Marital radius in the parental generation was relatively long (146 km), and it was six times longer for non-Maya and mixed couples than Maya. Living and housing conditions were similar for both Maya and non-Maya (mixed couples typically had an intermediate condition), except for sewage system (sanitation). The Maya income was 64% lower. Maya men and women were short. The girls from Merida were short, hyper-brachycephalic (short headed), and europrosopic (broad face). Among them, Maya girls were even shorter, more round-headed, and more broad-faced than non-Maya girls. Menarche occurred on the average at an age of 12.6 years in mothers and 12.1 years in daughters. As the generation time was about 25 years, there was a slow acceleration of maturation (0.2 years per decade). Presumably, also stature has increased in recent years.