Genetic Variation of pln Loci Among Probiotic Lactobacillus plantarum Group Strains with Antioxidant and Cholesterol-Lowering Ability

Probiotics and Antimicrobial Proteins - In the present study, 14 different plantaricin-encoding genes of pln loci were studied and compared to available sequences from public domain database of...     

Composition and larvicidal activity of leaves and stem essential oils of Chloroxylon swietenia DC against Aedes aegypti and Anopheles stephensi

The laboratory bioassay of the essential oil and the isolated compounds from Chloroxylon swietenia against Aedes aegypti and Anopheles stephensi was carried out to evaluate the larvicidal activity. LC50 value estimated for A. aegypti and An. stephensi were 16.5 and 14.9 microg/ml and 20.2 and 19 microg/ml for leaf and stem oils, respectively. The three sesquiterpenes pregeijerene, geijerene and germacrene D were isolated and their Larvicidal activity was evaluated. Pregeijerene and geijerene were observed for the first time in the volatile constituents of C. swietenia, however, leaves contained higher amount of geijerene compared to stems.     

A study of host specificity in the entomopathogenic fungus Beauveria bassiana (Hypocreales,Clavicipitaceae)

Beauveria bassiana (Balsamo – Crivelli) Vuillemin based mycoinsecticides are used against agricultural, veterinary and medical insect pests. The fungus has a very diverse and extensive host range. Variation in virulence among isolates of B. bassiana to different insect species has been abundantly documented. Given the effect of multiple factors on virulence, it is not certain whether the observed difference in virulence can be labelled as host specificity. Environmental conditions and susceptibility of the insect population are two main factors that affect successful fungal infection. Keeping the environmental factors constant, if virulence of an isolate to different insect species and different populations within an insect species is compared, the scale of difference between the two responses can be estimated. If differences in virulence of an isolate to different insect species are greater than the difference in virulence to different insect populations within an insect species, then, the isolate can be considered as exhibiting specific preference to those insect species towards which it exhibits high virulence. To examine this feature, a worldwide sample of B. bassiana was bioassayed on nine insect species and two different populations within two insect species. Laboratory bioassays were done on: Bombyx mori (Lepidoptera), Spodoptera litura (Lepidoptera), Chilo partellus (Lepidoptera), Helicoverpa armigera (Lepidoptera), Epilachna vigintioctopunctata (Coleoptera), Mylabris pustulata (Coleoptera), Aphis craccivora (Homoptera), Maconellicoccus hirsutus (Hemiptera) and Oecophylla smaragdina (Hymenoptera). The range of variation in virulence of a B. bassiana isolate to different insect species was not more than that observed with different populations within a single insect species. B. bassiana is thus a generalist with no strict host preference. B. bassiana based biopesticide can be used as a broad spectrum insecticide against a myriad of insect pests.     

Biodiversity and dye decolourization ability of an acclimatized textile sludge

In the present study, sludge sample from biological treatment plant of a textile industry was acclimatized for decolourization of azo dye Direct Black 38 (DB38). A continuous culture experiment showed that the acclimatized sludge could decolourize 76% of 100mg/l DB38. Bacterial community in the sludge was analyzed using culture-independent molecular approach to get the complete picture of its diversity. RFLP analysis of its 16S rRNA gene library divided the clones into 14 distinct groups. Phylogenetic analysis of these groups showed that they belonged to five different bacterial lineages: beta- and gamma-Proteobacteria (3 and 4 respectively), Bacteroidetes (2), Firmicutes (4) and Actinobacteria (1). The largest number of clones was found to cluster in the gamma-Proteobacteria (54%), followed by Firmicutes (19%), beta-Proteobacteria (14%), Bacteroidetes (10%) and Actinobacteria (3%).     

Antioxidant Systems in Sunflower as Affected by Oxalic Acid

Changes in antioxidant systems in sunflower (Helianthus annuus L.) inbred lines were studied in relation to different concentrations (0, 2, 3 and 4 mM) of oxalic acid. A great variability of the total superoxide dismutase (SOD) activity was observed in different genotypes after application of oxalic acid. Genotypes showing no change in SOD activity, as well as those with decreased and increased activities, have been found. The highest guaiacol peroxidase (GPX) activity was recorded in the leaves of Ha-26A genotype where the activity of SOD was low. In genotypes with increased GPX activity the malonyldialdehyde content was low. The increase in reduced glutathione content occured in almost all of the genotypes studied with the increase in oxalate concentration. Some genotypes such as PR-ST-3B, showed distinctive and combined activity of several antioxidant systems. Also, obtained results for the content of total phenols support the idea of using soluble phenols as molecular markers and confirm the hypothesis of the defensive role of these compounds in plants. This revised version was published online in July 2006 with corrections to the Cover Date.     

Species richness in agamid lizards: chance,body size,sexual selection or ecology?

Why does species richness vary so greatly across lineages? Traditionally, variation in species richness has been attributed to deterministic processes, although it is equally plausible that it may result from purely stochastic processes. We show that, based on the best available phylogenetic hypothesis, the pattern of cladogenesis among agamid lizards is not consistent with a random model, with some lineages having more species, and others fewer species, than expected by chance. We then use phylogenetic comparative methods to test six types of deterministic explanation for variation in species richness: body size, life history, sexual selection, ecological generalism, range size and latitude. Of eight variables we tested, only sexual size dimorphism and sexual dichromatism predicted species richness. Increases in species richness are associated with increases in sexual dichromatism but reductions in sexual size dimorphism. Consistent with recent comparative studies, we find no evidence that species richness is associated with small body size or high fecundity. Equally, we find no evidence that species richness covaries with ecological generalism, latitude or range size.     

Homology modeling,substrate docking,and molecular simulation studies of mycobacteriophage Che12 lysin A

Mycobacteriophages produce lysins that break down the host cell wall at the end of lytic cycle to release their progenies. The ability to lyse mycobacterial cells makes the lysins significant. Mycobacteriophage Che12 is the first reported temperate phage capable of infecting and lysogenising Mycobacterium tuberculosis. Gp11 of Che12 was found to have Chitinase domain that serves as endolysin (lysin A) for Che12. Structure of gp11 was modeled and evaluated using Ramachandran plot in which 98 % of the residues are in the favored and allowed regions. Che12 lysin A was predicted to act on NAG-NAM-NAG molecules in the peptidoglycan of cell wall. The tautomers of NAG-NAM-NAG molecule were generated and docked with lysin A. The stability and binding affinity of lysin A – NAG-NAM-NAG tautomers were studied using molecular dynamics simulations.     

Structure-Function Elucidation of a New α-Conotoxin,Lo1a,from Conus longurionis

α-Conotoxins are peptide toxins found in the venom of marine cone snails and potent antagonists of various subtypes of nicotinic acetylcholine receptors (nAChRs). nAChRs are cholinergic receptors forming ligand-gated ion channels in the plasma membranes of certain neurons and the neuromuscular junction. Because nAChRs have an important role in regulating transmitter release, cell excitability, and neuronal integration, nAChR dysfunctions have been implicated in a variety of severe pathologies such as epilepsy, myasthenic syndromes, schizophrenia, Parkinson disease, and Alzheimer disease. To expand the knowledge concerning cone snail toxins, we examined the venom of Conus longurionis. We isolated an 18-amino acid peptide named α-conotoxin Lo1a, which is active on nAChRs. To the best of our knowledge, this is the first characterization of a conotoxin from this species. The peptide was characterized by electrophysiological screening against several types of cloned nAChRs expressed in Xenopus laevis oocytes. The three-dimensional solution structure of the α-conotoxin Lo1a was determined by NMR spectroscopy. Lo1a, a member of the α4/7 family, blocks the response to acetylcholine in oocytes expressing α₇ nAChRs with an IC₅₀ of 3.24 ± 0.7 μm. Furthermore, Lo1a shows a high selectivity for neuronal versus muscle subtype nAChRs. Because Lo1a has an unusual C terminus, we designed two mutants, Lo1a-ΔD and Lo1a-RRR, to investigate the influence of the C-terminal residue. Lo1a-ΔD has a C-terminal Asp deletion, whereas in Lo1a-RRR, a triple-Arg tail replaces the Asp. They blocked the neuronal nAChR α₇ with a lower IC₅₀ value, but remarkably, both adopted affinity for the muscle subtype α₁β₁δϵ.