An analysis of the mole rats (Mammalia: Rodentia) from Langebaanweg (Mio-Pliocene, South Africa)

A study of the taphonomy and age profiles of the mole rat population from Langebaanweg ‘E’ Quarry was undertaken in order to see if these subterranean rodents had been accumulated by predation (coprocoenosis hypothesis) or as a result of drowning in their burrows during a flood event (catastrophocenosis hypothesis). Previous research has cited the bathyergids as being the most common rodent at Langebaanweg, however, a comprehensive study of new micromammal material indicates that murids, rather than mole rats, dominate most of the assemblages. The concentration of mole rat remains in many of the fossil-bearing levels at Langebaanweg is, nevertheless, still extremely high compared to other fossil sites or predation assemblages in the area. A taphonomic examination of mole rat incisor surfaces indicates that digestion occurs on between 44% and 54% of incisors in the different assemblages, and this, together with the degree of digestion suggests that category 1 and category 2 predators had been responsible for the accumulation of the fossil mole rat assemblages. The absence of rounding, polishing or weathering on the fossils indicates that there has been little or no transport by water, and that burial of the bones was rapid. Breakage and damage to the anterior portion of many of the mandibles made it impossible to accurately assess the age of the older mole rats, and the majority of mandibles could provide only a minimum age of the animal at the time of death. The age profile indicates that very young individuals are missing from the assemblages. This allows for refutation of the previously made suggestion that flooding was responsible for the death of the majority of Langebaanweg mole rats and also introduces the possibility that Bathyergus hendeyi may have been a social animal, unlike extant bathyergids which are solitary.     

A comparison of national approaches to setting ecological status boundaries in phytobenthos assessment for the European Water Framework Directive: results of an intercalibration exercise

The European Union (EU)’s Water Framework Directive (WFD) requires that all Member States participate in intercalibration exercises in order to ensure that ecological status concepts and assessment levels are consistent across the EU. This paper describes one such exercise, performed by the countries in the Central/Baltic Geographical Intercalibration Group stretching from Ireland in the west to Estonia in the east and from the southern parts of Scandinavia to the northern regions of Spain and Italy (but excluding alpine regions, which were intercalibrated separately). In this exercise, methods used to measure ecological status of rivers using benthic diatoms were compared. Ecological status is estimated as the ratio between the observed value of a biological element and the value expected in the absence of significant human impact. Approaches to defining the ‘reference sites’, from which these ‘expected’ values were derived, varied from country to country. Minimum criteria were established as part of the exercise but there was still considerable variation between national reference values, reflecting typological differences that could not be resolved during the exercise. A simple multimetric index was developed to compare boundary values using two widely used diatom metrics. Boundary values for high/good status and good/moderate status set by each participant were converted to their equivalent values of this intercalibration metric using linear regression. Variation of ±0.05 EQR units around the median value was considered to be acceptable and the exercise provided a means for those Member States who fell significantly above or below this line to review their approaches and, if necessary, adjust their boundaries. Handling editor: J. Padisak     

Cost and Efficiency of Large Mammal Census Techniques: Comparison of Methods for a Participatory Approach in a Communal Area, Zimbabwe

The comparison of precision is often advocated for the selection of an appropriate census and/or monitoring method for wildlife, but little attention is generally paid to their cost effectiveness, a crucial criterion given budgetary and logistical constraints. We present six direct count methods conducted in a communal area of the Zambezi Valley, Zimbabwe, and compare them in terms of (1) effort and cost to survey an area (sampling efficiency), and (2) efficiency in data collection (detection efficiency). Methods ranged from c.US$0.2 to over US$6.0/km² and needed from 0.1 to 5.0 human-h/km². The comparison of efficiencies showed the advantages of simple ground methods: foot counts and particularly bicycle counts appear well adapted to the ecological and human context of our study. The relative benefits and constraints of the different methods are discussed in the context of a community-based wildlife management programme.     

Taphonomy and palaeoecology of the late Pleistocene to middle Holocene small mammal succession of El Harhoura 2 cave (Rabat-Témara, Morocco)

The relationship between local and global climatic variations and the origin and dispersal of Homo sapiens in Africa is complex, and North Africa may have played a major role in these events. In Morocco, very few studies are specifically dedicated to small fossil vertebrates, and neither taphonomic nor palaeoecological studies have been undertaken on these taxa, particularly in archaeological contexts. The late Pleistocene to middle Holocene succession of El Harhoura 2 cave, situated in the region of Témara, yields an exceptionally rich small vertebrate assemblage. We present the results of a first systematic, taphonomic, and palaeoecological study of the small mammals from Levels 1 to 8 of El Harhoura 2. The absence of bone sorting and polishing, as well as the presence of significant traces of digestion indicate that the small mammal bones were accumulated in the cave by predators and that no water transport occurred. Other traces observed on the surface of bones consist mainly of root marks and black traces (micro-organisms or more probably manganese) which affected the majority of the material. The percentage of fragmentation is very high in all stratigraphic levels, and the post-depositional breakage (geologic and anthropogenic phenomena) obscure the original breakage patterns of bones by predators. According to the ecology of the different species present in the levels of El Harhoura 2, and by taking into account possible biases highlighted by the taphonomic analysis, we reconstruct the palaeoenvironmental evolution in the region. For quantitative reconstructions we used two indices: the Taxonomic Habitat Index (THI) and the Gerbillinae/Murinae ratio. Late Pleistocene accumulations were characterised by a succession of humid (Levels 3, 4a, 6, and 8) and arid (Levels 2?, 5, and 7) periods, with more or less open landscapes, ending in an ultimate humid and wooded period during the middle Holocene (Level 1). We discuss particular limits of our results and interpretations, due to an important lack of taxonomic, ecological, and taphonomic knowledge in North Africa.     

Synthesis and SAR of 3- and 4-substituted quinolin-2-ones: discovery of mixed 5-HT(1B)/5-HT(2A) receptor antagonists

Quinolin-2-ones bearing a heteroaryl-piperazine linked by a two carbon chain at the 3- or 4-position were synthesised and evaluated as mixed 5-HT(1B)/5-HT(2A) receptor antagonists. Potent mixed antagonists were obtained with thieno[3,2-c]pyridine derivatives. In this series, compound 2.1 (SL 65.0472) proved to be functional antagonist at both the 5-HT(2A) receptor (rat in vivo 5-HT-induced hypertension model) and the 5-HT(1B) receptor (dog in vitro saphenous vein assay).     

Molecular docking of heparin oligosaccharides with Hep-II heparin-binding domain of fibronectin reveals an interplay between the different positions of sulfate groups

Fibronectin is a major component of the extracellular matrix and serves as support for cell adhesion and migration. Heparin and heparan sulfates (HS) have been reported to be high-affinity ligands for fibronectin. The strongest heparin/HS-binding site, named Hep-II, is located in the C-terminal repeat units FN12-14 of fibronectin. Mutational studies of recombinant fibronectin fragments and elucidation of the X-ray crystallographic structure of Hep-II in complex with heparin allowed localizing the main heparin/HS-binding site in FN13 to two parallel amino acid clusters: R1697, R1698, R1700 and R1714, R1716, R1745. Heparin, which is more sulfated than HS, is a better ligand for fibronectin, indicating that the sulfate density is important for the interactions. However, other studies demonstrated that the position of sulfate groups is also critical for high-affinity binding of the polysaccharides to fibronectin. In the current work, we used molecular docking of Hep-II domain of fibronectin with a series of differently sulfated dodecasaccharides of heparin to determine the implication of each sulfate position in the interaction. By using this approach, we confirmed the implication of R1697, R1698, R1700 and R1714 and we identified other amino acids possibly involved in the interaction. We also confirmed a hierarchic involvement of sulfate position as follows: 2S >> 6S > NS. Interestingly, the formation of stable complexes required a mutual adaptation between Hep-II domain and oligosaccharides, which was different according to the pattern of sulfation. Finally, we demonstrated that 3-O-sulfation of heparin stabilized even more the complex with Hep-II by creating new molecular interactions. Collectively, our models point out the complexity of the molecular interactions between heparin/HS and fibronectin.