Adaptation of the Morningness–Eveningness Stability Scale improved (MESSi) into Turkish

Morningness–eveningness is an individual difference that is related with various traits such as behavioral problems, personality, and health. The aim of the current study is to adopt the Morningness–Eveningness Stability Scale improved (MESSi) which is a novel assessment tool that consists of subscales of morning affect (MA), eveningness (EV), and distinctness (DI) into Turkish. Concurrent validity of the MESSi along with Big five inventory (BIG-5), Subjective alertness level, Pittsburg Sleep Quality Index (PSQI), Positive and Negative Affect Schedule (PANAS) were analyzed. The scale was administered to 1,076 high school and university students aged 14–47 years (M = 19.49, SD = 3.53). The explanatory factor analysis (EFA) and confirmatory factor analysis (CFA) revealed the three-factor structure of MESSi. According to the concurrent validity result of the MESSi with BIG-5, conscientiousness was found to correlate positively with MA and negatively with EV. Also, extraversion showed a negative correlation with DI and positive correlation with MA. Furthermore, the subjective alertness rating results showed that MA was positively related to alertness in the morning hours and negatively in the evening hours. Also, sleep quality-related results showed that EV and DI are positively related to total PSQI scores and negatively related to MA. In addition, concerning positive affect (PA) and negative affect (NA), MA was positively related with PA and negatively with NA, while DI was negatively related with PA and positively with NA. In overall, MESSi is a valid and reliable instrument and can be used in Turkish students.     

Alterations in p16 and p53 genes and chromosomal findings in patients with lung cancer: Fluorescence in situ hybridization and cytogenetic studies

Background: Chromosomal aberrations and instability of gene(s) are two factors related to the genetic instability of cancer cells. A loss of the tumor-suppressor function of the genes p16 and p53 is the most common event leading to the development of human cancers. Carcinoma of the lung is the leading cause of cancer deaths in the world. Chromosomal abnormalities in lung cancer may provide a valuable clue to the identification of target loci and culminate in a successful search for the major genes. The aim of this study was to investigate (i) alterations of the p16 and p53 genes and (ii) chromosomal aberrations in patients with small cell and non-small cell lung cancer by fluorescence in situ hybridization (FISH) and cytogenetic studies. Methods: We carried out cytogenetic analysis by Giemsa-banding in 18 cases. FISH probes for the p16 and p53 genes were also used on interphase nuclei to screen the alterations in these genes in lung cancer (LC).Results: We observed a high frequency of losses of the p16 – in 8/18 (44%) – and p53 – in 7/18 (39%) – genes in the cases with LC. A total of 18 patients showed predominantly numerical and structural aberrations. Among these two types, structural aberrations predominated and usually consisted of deletions, breaks, and fragilities in various chromosomes. Both structural and numerical changes were observed in almost all patients. Chromosomes 3 and 1 were found to be most frequently involved in structural abnormalities, followed by chromosomes 6, 9, and 8. Autosomal aneuploidies were also observed to be the most frequent (chromosomes 22, 19, 18, 20, 9, and 17), followed by those of the X and Y chromosomes. The expression of fragile sites was also found to be significantly higher in seven chromosomal regions: 3p14, 1q21, 1q12, 6q26, 9q13, 8q22, and 8q24. Conclusion: Our data confirmed that DNA damage and genomic instability may be factors contributing to the mutation profile and development of lung cancer. The patients who developed lung cancer showed a high frequency of loss of both p16 and p53, in addition to chromosomal aberrations. Tobacco could be a major carcinogenic factor in lung-cancer progression. The loss of p16 and p53, and increased incidence of autosomal aneuploidy and chromatid breaks, along with other chromosomal alterations, can contribute to the progression of the disease.     

Length–weight relationships for seven fish species from the southeastern Black Sea

This study reports the parameters a and b of the length–weight relationships for seven fish species (Gobius niger, Mesogobius batrachocephalus, Mullus barbatus, Neogobius melanostomus, Raja clavata, Scorpaena porcus, Uranoscopus scaber) from the southeastern Black Sea.     

Length–weight relationships for nine species of batoids from the Iskenderun Bay,Turkey

Presented are length–weight relationships for Rhinobatos rhinobatos, Rhinobatos cemiculus, Gymnura altevela, Dasyatis pastinaca, Rhinoptera marginata, Pteromylaeus bovinus, Torpedo nobiliana, Raja miraletus and Raja clavata captured by gillnet, longline and bottom trawl fishing between May 2010 and July 2011 off the east coast of Iskenderun Bay, Turkey.     

Cytogenetic status of patients with congenital malformations or suspected chromosomal abnormalities in Turkey: a comprehensive cytogenetic survey of 11,420 patients

Chromosoma - Cytogenetic analysis is helpful in diagnostic workup of patients having prenatal or early postnatal medical problems and provides a basis for genetic counseling or deciding on clinical...     

The first report described as an important study: The association of mannose-binding lectin gene 2 polymorphisms in children with Down syndrome

BACKGROUND:

Mannose-binding lectin gene 2 (MBL2) plays a very important role in the first line of host immune response in Down syndrome (DS). The importance of MBL2 gene polymorphisms in children with DS is unclear, and no research has addressed MBL2 gene polymorphisms in patients with DS. This is the first report describing an important association between MBL2 gene polymorphisms and infections in children with DS.

MATERIALS AND METHODS:

We compared the frequency of single-nucleotide polymorphisms (SNPs) at two codons of the MBL2 gene in a cross sectional cohort of 166 children with DS and 229 controls. Polymorphisms at codons 54 (GGC→GAC) and 57 (GGA→GAA) in exon 1 of the MBL2 gene were typed by polymerase chain reaction (PCR)-restriction fragment length polymorphism (RFLP) technique using the restriction enzymes BshN1 (derivated from Bacillus sphaericus) and MboII (derivated from Moraxella bovis), respectively.

RESULTS:

MBL2 codon 54 GA genotype frequency was found to be lower in patients with DS (22.9%) than those of healthy controls (35.8%), differences were statistically significant (OR = 0.532, 95% CI = 0.339-0.836, P = 0.008). On the other hand, codon 57 polymorphism in the MBL2 gene was detected in none of the DS patients, but only one person in the control group showed codon 57 GA genotype (OR = 1.004, 95% CI = 0.996-1.013, P = 1.000).

CONCLUSION:

Our data provides an evidence for the first time that a homozygote or heterozygote for the variant, MBL2 alleles, is not associated with infections in patients with DS, and do not influence the incidence of infections.     

Age and growth of stargazer (Uranoscopus scaber L., 1758) in the southeastern Black Sea

A sample of 346 Uranoscopus scaber (L., 1758) was collected from the southeastern Black Sea between January 2002 and May 2005 in order to provide information on age, growth, length–weight relationship, and stomach contents of this species. Total length and total weight of sampled fish ranged from 5.2 to 21.9 cm and from 2.0 to 182.5 g, respectively. The sex ratio (1 : 1.98) was biased toward females (P < 0.05). Isometric growth was determined in the population. Length–weight relationships for all individuals were described by the parameters: a = 0.0167, b = 3.00, with the r² = 0.99. The population was composed of five age‐classes (I–V years). The von Bertalanffy growth parameters (±SE) and confidence limit (CL, 95%) for the entire population were: L_∞ = 26.31 ± 0.838 cm (CL: 24.66–27.96), k = 0.339 ± 0.023 1/year (CL: 0.294–0.385), and t_o = 0.087 ± 0.0346 year (CL: 0.019–0.155) (r² = 0.96). Growth performance index (Φ) was 2.37. The diet was composed of Gobius sp. (2.2%),Trachurus trachurus (2.1%), Merlangius merlangus euxinus (4.3%) and unidentified fish species (17.4%); 39.1% were unidentified remains.     

Age, growth and food composition of Scorpaena porcus (Linnaeus, 1758) in the southeastern Black Sea

Samples of 525 Scorpaena porcus (Linnaeus, 1758) were collected from the southeastern Black Sea between January 2002 and May 2003 for information on age, growth, length–weight relationships and stomach contents. Total length of sampled fish ranged from 4.6 to 22.9 cm and total weight from 1.3 to 220 g. The sex ratio (1 : 1.61) was biased toward females (P < 0.05). Positive allometric growth was determined in the collected samples. The length–weight relationship for all individuals was described by the parameters a  = 0.0149 and b  = 3.09, with r ² = 0.99. The sample was composed of five age-classes (0–7 years). Three growth models were used to identify the growth characteristics: von Bertalanffy,     ; logistic,     ; and Schnute and Richards,     . Among these, the Schnute and Richards model was best fitted to the data as     The diet was composed of Carcinus mediterraneus (18.2%), Crangon crangon (12.1%), unidentified crab species (10.6%), Gobius sp. (4.6%), Palaemon sp. (4.5%), Macropipus sp. (4.5%), Engraulis encrasicholus (1.5%), Gastropoda (1.5%), and unidentified remains (34.9%).     

Gifted and non-gifted students’ diurnal preference and the relationship between personality,sleep, and sleep quality

The current study had two main objectives. First, we examined gifted and non-gifted students’ diurnal preferences. Secondly, we examined the relationships among age, gender, personality, sleep quality, and chronotype of gifted students. Data were gathered from 276 gifted students and 1921 non-gifted students whose ages range between 7 and 17 years old, in same three cities in Turkey using the Composite Scale of Morningness (CSM) to assess diurnal preference, the Big Five Inventory (BIG-5) to assess personality and the Pittsburgh Sleep Quality Index (PSQI) to measure sleep quality. The first result indicated that gifted students were more morning-oriented compared to non-gifted students. The other main result was that the conscientiousness was the best predictor of CSM scores in gifted students. Additionally, conscientiousness, age, and global PSQI predicted CSM scores, respectively. Moreover agreeableness, conscientiousness, and emotional stability were positively related to morning orientation, while age, sleep quality, sleep latency, daytime dysfunction, and global PSQI were negatively related with chronotype in gifted students.     

Cytogenetic study of recurrent miscarriages and their parents

There are substantial evidences that genetic alterations are contributing factors to the risk for recurrent miscarriages. This study was conducted to determine the frequency and contribution of chromosomal abnormalities in miscarriages and in couples with recurrent miscarriages. We studied a total of 41 miscarriages and their parents with a history of 2-11 recurrent miscarriages. Chromosomal analysis from chorionic villus sampling (CVS) and fetal tissues were performed according to standard cytogenetic methods using G-banding technique. Major chromosomal aberrations and polymorphic variants were found in 51 and 4.8%, respectively. The chromosomal abnormalities were structural (34.4%) and numerical (65.1%) of which 26.1, 21.7, 8.7 and 8.7% were fetal sex aneuploid, triploid, mosaics and trisomic, respectively. Unbalanced and balanced rearrangements were found in 17.2% and 8.6% of all abnormalities, respectively. Major chromosomal abnormalities in couples were seen in 4.9%. The chromosomal abnormalities associated with pregnancy losses and recurrent miscarriages are mostly numerical ones. The incidence of balanced translocations found here is 4.9% which is near to the mode (about 3-6%) observed in the previous studies. Those frequencies are greater than in the general population (0.3%). This indicates that balanced translocations, seen in parents, have some importance in causing miscarriage. The major parental chromosomal aberrations are significantly associated with fetal wastage. Mosaicism should be taken into account for cytogenetic analyses of pregnancy losses. Thus, cytogenetic analyses should be recommended in couples with recurrent miscarriages, when clinical data fail to clarify the cause.