天山云杉森林土壤有机碳沿海拔的分布规律及其影响因素

对森林土壤有机碳库含量的估测及其影响因素的研究一直是学术界关注的热点。在水热梯度上可能会存在森林土壤有机碳的分布规律,但多数在混交林内开展的工作因无法区分群落类型变化的影响而无法准确反映出森林土壤有机碳在水热梯度上的变化规律。天山云杉森林为纯林类型,在天山山脉巨大山体上呈带状分布(平均海拔下限1750 m至平均海拔上限2760m),存在水热梯度,能够排除混交林中群落类型变化对土壤有机碳的影响。因此,在天山云杉森林带按海拔梯度设置系列样地并采样,用重铬酸钾-氧化外加热法测定土壤有机碳含量并研究土壤有机碳密度沿海拔的分布规律,分析水热配比关系与植物群落(生物量)对该规律的影响。结果表明:①1 m深度的标准土壤剖面上,各海拔梯度的土壤有机碳密度随着剖面深度的增加呈减少的趋势;②各海拔梯度的有机碳主要集中在土壤表面0—40 cm范围内,所占的比例约占全剖面的60%—70%,具有明显的表聚现象;③在天山北坡中段云杉森林带的海拔下限到海拔上限标准剖面总土壤有机碳密度出现不显著的先下降后上升再下降的双峰变化,峰值出现在海拔1800—2000 m与海拔2400—2600 m,海拔2600—2800 m的有机碳密度最小;④云杉纯林在不同海拔的平均胸径呈先减少后增加再减少的趋势,与土壤总有机碳密度变化规律较吻合;⑤天山云杉森林土壤有机碳密度沿海拔的变化是水热梯度变化及受其影响的森林长势二者共同作用的结果。     

Macrophage Depletion Impairs Corneal Wound Healing after Autologous Transplantation in Mice

Purpose

Macrophages have been shown to play a critical role in the wound healing process. In the present study, the role of macrophages in wound healing after autologous corneal transplantation was investigated by depleting local infiltrated macrophages.

Methods

Autologous corneal transplantation model was used to induce wound repair in Balb/c mice. Macrophages were depleted by sub-conjunctival injections of clodronate-containing liposomes (Cl₂MDP-LIP). The presence of CD11b⁺ F4/80⁺ macrophages, α-smooth muscle actin⁺ (α-SMA⁺) myofibroblasts, CD31⁺ vascular endothelial cells and NG₂ ⁺ pericytes was examined by immunohistochemical and corneal whole-mount staining 14 days after penetrating keratoplasty. Peritoneal macrophages were isolated from Balb/c mice and transfused into conjunctiva to examine the recovery role of macrophages depletion on wound healing after autologous corneal transplantation.

Results

Sub-conjunctival Cl₂MDP-LIP injection significantly depleted the corneal resident phagocytes and infiltrated macrophages into corneal stroma. Compared with the mice injected with PBS-liposome, the Cl₂MDP-LIP-injected mice showed few inflammatory cells, irregularly distributed extracellular matrix, ingrowth of corneal epithelium into stroma, and even the detachment of donor cornea from recipient. Moreover, the number of macrophages, myofibroblasts, endothelial cells and pericytes was also decreased in the junction area between the donor and recipient cornea in macrophage-depleted mice. Peritoneal macrophages transfusion recovered the defect of corneal wound healing caused by macrophages depletion.

Conclusions

Macrophage depletion significantly impairs wound healing after autologous corneal transplantation through at least partially impacting on angiogenesis and wound closure.     

Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils

Ammonia oxidation is the first and rate-limiting step of nitrification and is performed by both ammonia-oxidizing archaea (AOA) and bacteria (AOB). However, the environmental drivers controlling the abundance, composition, and activity of AOA and AOB communities are not well characterized, and the relative importance of these two groups in soil nitrification is still debated. Chinese tea orchard soils provide an excellent system for investigating the long-term effects of low pH and nitrogen fertilization strategies. AOA and AOB abundance and community composition were therefore investigated in tea soils and adjacent pine forest soils, using quantitative PCR (qPCR), terminal restriction fragment length polymorphism (T-RFLP) and sequence analysis of respective ammonia monooxygenase (amoA) genes. There was strong evidence that soil pH was an important factor controlling AOB but not AOA abundance, and the ratio of AOA to AOB amoA gene abundance increased with decreasing soil pH in the tea orchard soils. In contrast, T-RFLP analysis suggested that soil pH was a key explanatory variable for both AOA and AOB community structure, but a significant relationship between community abundance and nitrification potential was observed only for AOA. High potential nitrification rates indicated that nitrification was mainly driven by AOA in these acidic soils. Dominant AOA amoA sequences in the highly acidic tea soils were all placed within a specific clade, and one AOA genotype appears to be well adapted to growth in highly acidic soils. Specific AOA and AOB populations dominated in soils at particular pH values and N content, suggesting adaptation to specific niches.     

单链抗体展示系统研究进展

单链抗体(single chain antibody fragment,scFv)是由抗体重链可变区(variable region of heavy chain,VH)和轻链可变区(variable region of light chain,VL)通过柔性短肽连接组成的小分子,是具有完整抗原结合活性的最小功能片段,包含抗体识别及抗原结合部位。相比于其他抗体,scFv具有分子量小、穿透性强、免疫原性弱、易构建表达等优点。目前,scFv最常用的展示系统主要有噬菌体展示系统、核糖体展示系统、mRNA展示系统、酵母细胞表面展示系统和哺乳动物细胞展示系统等。近年来,随着scFv在医学、生物学、食品安全学等领域的发展,使得其在生物合成和应用研究方面备受关注。本文对近年来scFv展示系统的研究进展作一综述,以期为scFv的筛选及应用提供理论基础。     

肇庆星湖湿地可培养放线菌多样性

摘要:【目的】探究星湖湿地可培养放线菌物种多样性,筛选潜在药源活性代谢产物产生菌,为后续菌种资源开发奠定基础。【方法】采用5种选择性分离培养基分离星湖湿地底泥中的放线菌,通过16S rRNA基因同源性分析代表性菌株的物种多样性;以3株病原细菌为指示菌检测分离菌株的抑菌活性;PCR扩增代表菌株的聚酮合酶(PKS I、PKS II)基因、非核糖体多肽合成酶(NRPS)基因、安莎类化合物(AHBA)基因及3-羟基-3-甲基戊二酰辅酶A还原酶(HMGA)基因。【结果】分离到135株放线菌菌株,被鉴定为放线菌纲的7 个目、10个科、13个属,优势类群为链霉菌、小单孢菌及诺卡氏菌。83株检测菌中,24.09%抗金黄色葡萄球菌(Staphylococcus aureus),4.8%抗大肠杆菌(Escherichia coli);24株高活性菌株中PKS I阳性率16.7%,PKS II阳性率62.5%,NRPS阳性率16.7%,AHBA阳性率12.5%,HMGA阳性率29.2%。活性复筛及HPLC结果显示,菌株XD007、XD114和XD128显著抑制3株病原指示菌,且能产生大量次级代谢产物。【结论】星湖湿地底泥中放线菌资源丰富,筛选到的活性菌株可用于后续药源活性次级代谢产物的分离。     

作物最高理论产量计算方法的应用——以合肥地区水稻为例

本文以合肥地区水稻为例,探讨了作物最高理论产量的计算方法,即首先根据“ＦＡＯ”农业生态带理论,计算出作物光温生产力指数,再根据当地的气候（主要是水分状况）对作物的光温生产力指数进行订正,从而求出作物的最高理论产量。     

雌激素对淀粉样β蛋白代谢的调节和毒性缓解

以淀粉样β蛋白为主的老年斑胞外沉积和神经元内神经原纤维缠结,是阿尔采末病(AD)特征性的病理学改变。近来,人们逐渐认可淀粉样蛋白假说,即认为淀粉样蛋白沉积是AD最初起因。研究人员正在寻找针对淀粉样β蛋白沉积的药物,雌激素是其中之一。初步的工作证明,雌激素能够调节淀粉样β蛋白前体代谢,减少淀粉样β蛋白生成,也能够减轻淀粉样B蛋白引起的免疫炎症反应、氧应激对细胞造成的损伤,和对抗细胞凋亡。     

Purification of Escherichia coli 30S ribosomal proteins by high performance liquid chromatography

High performance liquid chromatography was applied to the separation of proteins derived from the Escherichia coli 30S ribosomal subunit. Several methods of separating this protein mixture has been tested: size-exclusion chromatography on hydrophilic phases; ion exchange and reversed phase chromatography (on C2 to C18 hydrocarbon-bonded supports). Various elution systems were examined in order to obtain pure proteins suitable for micro-sequence analysis. The resolution and yields of the proteins varied considerably, depending on the type of support and gradient system used. The best results were achieved with uniformly globular-shaped supports of large pore size, and by combining high performance size exclusion with rechromatography on reversed phase columns. Purification conditions for the individual proteins are listed. The methods employed avoid any precipitation step and allow easy identification of the proteins by one or two-dimensional gel electrophoresis, amino-acid analysis or direct manual or automatic micro-sequencing. Since the isolation time is much reduced compared with conventional purification procedures, the proteins obtained by the techniques described here are well suited for topographical and immunological studies or reconstitution assays. Ribosomal proteins of other organisms can be separated under similar conditions.