Phosphorylation of thylakoid proteins during chloroplast biogenesis in greening etiolated and light-grown wheat leaves

Phosphorylation of polypeptides in isolated thylakoids was examined during chloroplast biogenesis in greening etiolated wheat leaves and 4 day-old wheat leaves grown under a diurnal light regime. At early stages of plastid development standard thylakoid preparations were heavily contaminated with nuclear proteins, which distorted the polypeptide phosphorylation profiles. Removal of contamination from membranes by sucrose density centrifugation demonstrated that the major membrane phosphoprotein in etioplasts was at 35 kDa. During etioplast greening a number of phosphoproteins appeared, of which the 25–27 kDa apoproteins of the light-harvesting chlorophylla/b protein complex associated with photosystem II (LHCII) became the most dominant. At the early stages of thylakoid development found at the base of the 4-day-old light grown leaf the LHCII apoproteins were evident as phosphoproteins; however the major phosphoprotein was polypeptide atca. 9kDA. Phosphorylation of both the LHCII apoproteins and the 9 kDa polypeptide in these thylakoids was not light-dependent. In the older thylakoids isolated from the leaf tip the LHCII apoproteins were the major phosphoproteins and their phosphorylation had become light-regulated; however phosphorylation of the 9 kDa polypeptide remained insensitive to light.     

Distributed Fading Memory for Stimulus Properties in the Primary Visual Cortex

It is currently not known how distributed neuronal responses in early visual areas carry stimulus-related information. We made multielectrode recordings from cat primary visual cortex and applied methods from machine learning in order to analyze the temporal evolution of stimulus-related information in the spiking activity of large ensembles of around 100 neurons. We used sequences of up to three different visual stimuli (letters of the alphabet) presented for 100 ms and with intervals of 100 ms or larger. Most of the information about visual stimuli extractable by sophisticated methods of machine learning, i.e., support vector machines with nonlinear kernel functions, was also extractable by simple linear classification such as can be achieved by individual neurons. New stimuli did not erase information about previous stimuli. The responses to the most recent stimulus contained about equal amounts of information about both this and the preceding stimulus. This information was encoded both in the discharge rates (response amplitudes) of the ensemble of neurons and, when using short time constants for integration (e.g., 20 ms), in the precise timing of individual spikes (≤∼20 ms), and persisted for several 100 ms beyond the offset of stimuli. The results indicate that the network from which we recorded is endowed with fading memory and is capable of performing online computations utilizing information about temporally sequential stimuli. This result challenges models assuming frame-by-frame analyses of sequential inputs.     

A global metagenomic map of urban microbiomes and antimicrobial resistance

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Electromyogram of pericranial muscles in frequency bands β and γ comparing various cognitive and emotional states

Results of comparison of power of electromyogram (EMG) of six pericranial muscles in electroencephalographic frequency bands β₁, β₂ and γ are presented corresponding to performances of the tasks bound to inductions of affective experiences. The external induction was implemented by means of presentation of images and the internal induction by means of autobiographical memoirs revived. The tasks were focused on an induction of affective experiences with different emotional valences—positive, negative and neutral. The EMG was derived, registered and processed by means of computer electroencephalography techniques. Self-assessments of signs and intensities of experienced emotions were recorded as well. The study involved two groups of healthy subjects—students-actors (N = 39), and students of other specialties (N = 32). Statistically reliable, reproducible and diverse differences of mean EMG power of the pericranial muscles took place in comparisons of psychophysiological states with different valences of emotions, and certain differences in comparisons of states without expressed emotional differences, but differing in the direction of attention took place also. Therefore it is obviously necessary for an assessment of a degree of muscular contamination in records of high-frequency scalp electroencephalograms (EEG) to supplement psychophysiological EEG methods with EMG registration and statistical analysis and to do such registration for several facial muscles.     

Second Transmembrane Helix (M2) and Long Range Coupling in Ca2+-ATPase

The actuator (A) domain of sarco(endo)plasmic reticulum Ca²⁺-ATPase not only plays a catalytic role but also undergoes large rotational movements that influence the distant transport sites through connections with transmembrane helices M1 and M2. Here we explore the importance of long helix M2 and its junction with the A domain by disrupting the helix structure and elongating with insertions of five glycine residues. Insertions into the membrane region of M2 and the top junctional segment impair Ca²⁺ transport despite reasonable ATPase activity, indicating that they are uncoupled. These mutants fail to occlude Ca²⁺. Those at the top segment also exhibited accelerated phosphoenzyme isomerization E1P → E2P. Insertions into the middle of M2 markedly accelerate E2P hydrolysis and cause strong resistance to inhibition by luminal Ca²⁺. Insertions along almost the entire M2 region inhibit the dephosphorylated enzyme transition E2 → E1. The results pinpoint which parts of M2 control cytoplasm gating and which are critical for luminal gating at each stage in the transport cycle and suggest that proper gate function requires appropriate interactions, tension, and/or rigidity in the M2 region at appropriate times for coupling with A domain movements and catalysis.     

Electroencephalographic characteristics of cognitive-specific attention in verbal learning—II: General characteristics of EEG spatial synchronization

Electroencephalograms (EEGs) were recorded in 19 standard derivations in 88 subjects (students) in states of: rest with the eyes open; memorization (learning) of verbal bilingual semantic pairs (Latin and Russian); and recollection (control) of the memorized information. Estimates of EEG coherence in these states were compared using statistical methods for the frequency bands θ, α₁, α₂, β₁, β₂, and γ. The results of this comparison showed that transition from the state of rest to those of memorization and recollection was accompanied by numerous changes in coherence in all the frequency bands. These changes varied in intensity and embrace practically the entire convexital cerebral cortex. Decrease in EEG coherence was predominant during the transition to the memorization state in various frequency bands, whereas during the transition from the rest state to that of recollection, EEG coherence increased in most of the frequency bands except for the band α₂. The reproducibility of this pattern of changes in EEG coherence is confirmed by the results in the subgroups formed by randomly subdividing the subjects into two groups. We think that the observed intense rearrangement of the spatial synchronization of the cortex electrical activity reflects the reorganization of the functional systems of neuronal ensembles to provide efficient memorization and recollection, respectively.     

Comprehensive analysis of expression and function of 51 sarco(endo)plasmic reticulum Ca2+-ATPase mutants associated with Darier disease

We examined possible defects of sarco(endo)plasmic reticulum Ca2+-ATPase 2b (SERCA2b) associated with its 51 mutations found in Darier disease (DD) pedigrees, i.e. most of the substitution and deletion mutations of residues reported so far. COS-1 cells were transfected with each of the mutant cDNAs, and the expression and function of the SERCA2b protein was analyzed with microsomes prepared from the cells and compared with those of the wild type. Fifteen mutants showed markedly reduced expression. Among the other 36, 29 mutants exhibited completely abolished or strongly inhibited Ca2+-ATPase activity, whereas the other seven possessed fairly high or normal ATPase activity. In four of the aforementioned seven mutants, Ca2+ transport activity was significantly reduced or almost completely lost, therefore uncoupled from ATP hydrolysis. The other three were exceptional cases as they were seemingly normal in protein expression and Ca2+ transport function, but were found to have abnormalities in the kinetic properties altered by the three mutations, which happened to be in the three DD pedigrees found by us previously (Sato, K., Yamasaki, K., Daiho, T., Miyauchi, Y., Takahashi, H., Ishida-Yamamoto, A., Nakamura, S., Iizuka, H., and Suzuki, H. (2004) J. Biol. Chem. 279, 35595-35603). Collectively, our results indicated that in most cases (48 of 51) DD mutations cause severe disruption of Ca2+ homeostasis by the defects in protein expression and/or transport function and hence DD, but even a slight disturbance of the homeostasis will result in the disease. Our results also provided further insight into the structure-function relationship of SERCAs and revealed critical regions and residues of the enzyme.     

Regulation of Apolipoprotein A-I Gene Expression in Human Macrophages by Oxidized Low-Density Lipoprotein

Biochemistry (Moscow) - Apolipoprotein A-I (ApoA-I) is a key component of reverse cholesterol transport in humans. In the previous studies, we demonstrated expression of the apoA-I gene in human...