Emergence of recombinant strains of Helicobacter pylori during human infection

Genetic recombination can be important evolutionarily in speeding the adaptation of organisms to new environments and in purging deleterious mutations. Here, we describe polymerase chain reaction (PCR), hybridization and DNA sequence-based evidence of six such exchanges between two strains of Helicobacter pylori during natural mixed infection of a patient in Lithuania. One parent strain contained the 37 kb long, virulence-associated cag pathogenicity island (PAI), and the other strain lacked this PAI. Most H. pylori from the patient had descended from the cag ⁺ parent, but had become cag ⁻ during infection. This had resulted from transfer of DNA containing the 'empty site' allele from the cag ⁻ strain and homologous recombination, not from excision of the cag PAI without DNA transfer. Other cases of recombination involved genes for an outer membrane protein ( omp 5 and omp 29; also called HP0227 and HP1342) and a putative phosphoenolpyruvate synthase ( ppsA  ; HP0121). Replacement of a short patch of DNA sequence (36–124 bp) was also seen. As the chance of forming any given recombinant is small, the abundance of recombinants in this patient suggests selection for particular recombinant genotypes during years of chronic infection. We suggest that genetic exchange among unrelated H. pylori strains, as documented here, is important because of the diversity of this gastric pathogen and its human hosts. Certain H. pylori recombinants may grow better in a given host than either parent. The vigour of growth, in turn, could impact on the severity of disease that infection can elicit.     

Naphthalene-induced changes in carbohydrate metabolism in Sarotherodon mossambicus Peters (Pisces: Cichlidae)

Sarotherodon mossambicus Peters was exposed to naphthalene concentrations ranging from 7.9 to 0.92 mg/l for periods ranging from 4 days to 10 weeks and changes in glycogen, glucose, pyruvic acid and lactic acid contents of liver and muscle were studied. While glucose levels remained unaffected, major effects could be seen in the other constituents following both lethal and sublethal naphthalene treatment. Whereas glycogen and pyruvic acid levels showed considerable reduction, lactic acid levels increased markedly. These changes are indicative of a metabolic stress leading to a shift to anaerobic metabolism. The effects do not appear to be related to the feeding and growth rates of the naphthalene-intoxicated fish.