羊布鲁氏菌的分泌蛋白质组分析

分泌蛋白是指那些分泌到细胞外的蛋白质。布鲁氏菌的分泌蛋白可能介导了病原与宿主之间的相互作用, 在布鲁氏菌的毒力方面发挥一定的作用, 但是研究方法的局限性限制了分泌蛋白的研究。本文报道了利用蛋白质组的方法来寻找羊布鲁氏菌的分泌蛋白。首先用TCA-丙酮法提取布鲁氏菌培养上清中的分泌蛋白, 双向电泳进行分离, 然后用质谱来鉴定这些蛋白, 最终鉴定到40种蛋白。通过生物信息学分析, 发现这些蛋白主要是ABC转运系统的底物结合蛋白、外膜蛋白和热休克蛋白。这些蛋白的识别不仅有助于对布鲁氏菌致病机制的理解, 而且也可为     

不同植被恢复方式下红壤线虫数量特征

退化红壤不同植被恢复方式下土壤线虫数量的顺序为：保护荒地＞干扰荒地＞马尾松＞小叶栋＞木荷＞混交林（木荷—马尾松）。土壤线虫数量的季节波动明显：春季和冬季较多,秋季居中,而夏季极显著少于其它季节（尸＜ｏ．０１）。就线虫数量季节变异系数所体现的群落稳定性而言,马尾松林地的变异系数最高（Ｐ＜０．０５）,指示其群落最不稳定。线虫数量在土壤剖面中呈明显的垂直梯度分布。在表层土壤,线虫数量与代表碳氮和生物活性水平的土壤质量指标,如有机碳、全氮、速效氮磷、微生物量、潜在可矿化碳氮、基础呼吸、酶活性等,一般呈极显著正相关（Ｐ＜０．０１）;而与代表土壤物理性质及交换性能的指标,如含水量、容重、颗粒组成、速效钾等一般没有相关性。鉴别分析（ＣＤＡ）将不同植被下的祥地分为３组,自荒１和自荒２为１组,小叶栋、木荷和混交林为１组,而马尾松单独为１组。总之,不同植被恢复下线虫数量的分异韧步体现了线虫指示红壤质量的潜力。     

Effect of a Functional Phospholipid Metabolome-Protein Association Pathway on the Mechanism of COVID-19 Disease Progression

This study aimed to explore the clinical practice of phospholipid metabolic pathways in COVID-19. In this study, 48 COVID-19 patients and 17 healthy controls were included. Patients were divided into mild (n=40) and severe (n=8) according to their severity. Phospholipid metabolites, TCA circulating metabolites, eicosanoid metabolites, and closely associated enzymes and transfer proteins were detected in the plasma of all individuals using metabolomics and proteomics assays, respectively. 30 of the 33 metabolites found differed significantly (P<0.05) between patients and healthy controls (P<0.05), with D-dimmer significantly correlated with all of the lysophospholipid metabolites (LysoPE, LysoPC, LysoPI and LPA). In particular, we found that phosphatidylinositol (PI) and phosphatidylcholine (PC) could identify patients from healthy controls (AUC 0.771 and 0.745, respectively) and that the severity of the patients could be determined (AUC 0.663 and 0.809, respectively). The last measurement before discharge also revealed significant changes in both PI and PC. For the first time, our study explores the significance of the phospholipid metabolic system in COVID-19 patients. Based on molecular pathway mechanisms, three important phospholipid pathways related to Ceramide-Malate acid (Cer-SM), Lysophospholipid (LPs), and membrane function were established. Clinical values discovered included the role of Cer in maintaining the inflammatory internal environment, the modulation of procoagulant LPA by upstream fibrinolytic metabolites, and the role of PI and PC in predicting disease aggravation.     

Discovery and SAR analysis of phenylbenzo[d][1,3]dioxole-based proprotein convertase subtilisin/kexin type 9 inhibitors

Proprotein convertase subtilisin/kexin type 9 (PCSK9) has emerged as a novel therapeutic target for the development of cholesterol-lowering drugs. In the discovery of PCSK9/LDLR (low-density lipoprotein receptor) protein-protein interaction (PPI) impairing small molecules, a total of 47 phenylbenzo[d][1,3] dioxole-based compounds were designed and synthesised. The result revealed that the 4-chlorobenzyl substitution in the amino group is important for the PPI disrupting activity. In the hepatocyte-based functional tests, active compounds such as A12, B1, B3, B4 and B14, restored the LDLR levels on the surface of hepatic HepG2 cells and increased extracellular LDL uptake in the presence of PCSK9. It is notable that molecule B14 exhibited good performance in all the evaluations. Collectively, novel structures targeting PCSK9/LDLR PPI have been developed with hypolipidemic potential. Further structural modification of derived active compounds is promising in the discovery of lead compounds with improved activity for the treatment of hyperlipidaemia-related disorders.     

丰水期长江感潮河口段网采浮游植物的分布与长期变化

于2009年6、8月对长江口门至江阴的河口段浮游植物进行了拖网采集,共检出浮游植物6门99属239种。其中:硅藻123种,甲藻19种,绿藻和蓝藻各42种,裸藻9种,黄藻4种。河口段网采浮游植物丰度以蓝藻占绝对优势,硅藻次之,两者合计在群落中的比例超过了95%。优势种也主要以蓝藻(水华鱼腥藻Anabaena flos-aquae、柔软腔球藻Coelosphaerium kuetzingiarum、微囊藻Microcystis spp.、颤藻Oscillatoria spp.和席藻Phorimidium spp.)构成,硅藻仅有2种(骨条藻Skeletonema spp.和颗粒直链藻Aulacoseira granulata)。口门内盐度均<0.5,群落基本以淡水类群为主,口门附近则以半咸水类群为主,海水类群主要位于口门外(盐度>13)。随着水温和营养盐水平的升高,8月浮游植物平均丰度(347.75×10⁴ 个/m³)明显高于6月(204.19×10⁴ 个/m³)。根据多维尺度和相似性分析,丰水期长江河口段浮游植物群落组成与分布存在显著(P<0.01)的时空差异。对比20世纪80年代以来的历史资料发现,长江口门内网采浮游植物丰度显著升高,且优势种也从硅藻(骨条藻、直链藻和圆筛藻)转变为蓝藻(颤藻、鱼腥藻和微囊藻)。     

转Bt水稻土壤跳虫群落组成及其数量变化

以转Bt水稻恢复系"克螟稻"(Cry1Ab纯合基因型)和"华恢1号"(Cry1Ab+Cry1Ac融合基因型)以及融合基因型转Bt水稻杂交系"Bt汕忧63",及其对照亲本水稻"秀水11"、"明恢63"和"汕优63"稻田土壤跳虫类群为对象,系统研究转Bt水稻种植下土壤跳虫群落组成及其数量动态变化,以评价不同基因型和不同育种品系转Bt水稻种植下稻田土壤生态安全性。结果表明,转Bt水稻种植导致土壤跳虫个别稀有类群的消失,并显著影响半土生和真土生类群以及土壤跳虫总量,但对群落多样性、均匀度和种类丰富度等影响不显著。与对照亲本相比,Cry1Ab转Bt稻田半土生类群和土壤跳虫总量及其种类丰富度指标显著增加了54.7%、44.4%和26.7%;Cry1Ab+Cry1Ac转Bt杂交稻田球角跳属百分比和真土生跳虫数量显著增加了212.3%和180.4%。就恢复系处理而言,与Cry1Ab转Bt水稻相比,Cry1Ab+Cry1Ac转Bt水稻种植导致棘跳属、球角跳属和原等跳属百分比以及半土生跳虫数量分别显著降低了62.1%、56.7%、61.8%和43.4%,同时,显著提高了裔符跳属百分比达88.2%。就Cry1Ab+Cry1Ac融合基因型转Bt水稻而言,与恢复系相比,转Bt杂交稻种植导致球角跳属和原等跳属百分比,半土生类群和土壤跳虫总量及其种类丰富度和群落多样性显著增加了312.9%和171.6%,302.4%和233.2%,以及54.0%和26.7%,同时,显著降低了裔符跳属百分比达65.5%。     

中国农业系统近40年温室气体排放核算

基于排放因子法构建了包含种植业和牲畜养殖业的农业系统温室气体排放核算体系,系统核算了1980-2020年我国全国尺度上的农业系统温室气体排放总量和变化趋势,并在区县级尺度下对1980、2000、2011年的中国农业系统的温室气体排放量进行核算,对比不同阶段农业系统温室气体排放变化的时空异质性规律。研究发现：1980-2020年我国农业系统温室气体排放量呈波动增长趋势,增长了近46%。CH₄是农业系统排放贡献最大的温室气体,占总排放量的47.33%。我国农业系统温室气体排放与不同地区农业生产方式有关,CH₄排放量高的地区主要位于我国主要水稻产区以及旱地作物产区。CO₂排放量高的地区主要位于东北、西北等地区以及华东地区。N₂O排放量较高地区主要位于西北的主要畜牧养殖地区,以及我国农业经济发展水平高的中南部地区。研究有助于揭示我国农业温室气体排放的动态特征,现状规律,以及空间差异性特征,从农业减排角度为实现双碳目标提供科学参考。     

华西雨屏区植被恢复对紫色土酸化的影响

退耕还林是控制水土流失、恢复森林植被和改善生态环境的重要举措。植被恢复进程中会发生土壤酸化,进而影响植物生长,厘清不同还林树种对土壤酸化的影响程度及作用机制有助于更好地评估退耕还林工程的整体生态效益。以华西雨屏区紫色土坡耕地(玉米)为对照,分析了退耕20a后柳杉纯林、柳杉-光皮桦混交林、慈竹林和茶园土壤pH的变化及其垂直分异。结果表明：玉米地、慈竹林、茶园、混交林和柳杉纯林0—50 cm土壤pH平均值分别为5.66、5.55、5.12、5.03和5.00,相较于玉米地,柳杉纯林、混交林和茶园土壤pH值显著下降(P<0.01),土壤酸化严重。相较于玉米地土壤pH值的均匀分布,植被恢复不同类型人工林pH值随土壤深度的增加而增加,10—50 cm土壤pH值(4.89—5.90)显著高于0—10 cm土壤pH值(4.72—5.21)(P<0.01),表层土壤酸化最明显。土壤pH值与土壤有机质含量呈极显著负相关,而与风化指数Na/K比值呈显著正相关,有机质含量和Na/K比值共同解释了土壤pH值变化的53.9%,表明植被恢复引起的土壤有机质积累与长石类矿物风化是驱动紫色土酸化的重要过程...