蛇伤胶囊对竹叶青蛇伤血管内皮细胞IL-8、VCAM-1、MIP-1α表达的影响

目的观察蛇伤胶囊对竹叶青蛇伤血管内皮细胞IL-8、VCAM-1、MIP-1α表达的影响。方法根据课题组前期实验方法制备蛇伤胶囊兔含药血清及复制竹叶青蛇伤细胞模型,设空白组(KB组)、模型组(MX组)和低、中、高浓度蛇伤胶囊药液治疗组(DY组、ZY组、GY组)5组,每组10个样本。在细胞实验中,KB组加入10%正常兔血清培养,MX组在KB组的基础上加入5μg/ml竹叶青蛇毒液培养,DY组、ZY组和GY组在MX组基础上培养6h后分别加入5%、10%和15%的含中药兔血清继续培养。各组分别培养72h后,收集细胞培养液,以酶联免疫吸附法检测细胞培养液中的IL-8、VCAM-1、MIP-1α含量。结果MX组的IL-8、VCAM-1及MIP-1α水平相对KB组均显著升高(均P0.01),蛇伤胶囊药液治疗组IL-8、VCAM-1及MIP-1α水平相对MX组均不同程度降低,其中ZY组变化有统计学意义(P0.01或P0.05)。结论蛇伤胶囊可通过降低IL-8、VCAM-1及MIP-1α表达治疗竹叶青蛇伤所致血管内皮炎症反应。     

Systems biology analysis reveals new insights into invasive lung cancer

Background

Adenocarcinoma in situ (AIS) is a pre-invasive lesion in the lung and a subtype of lung adenocarcinoma. The patients with AIS can be cured by resecting the lesion completely. In contrast, the patients with invasive lung adenocarcinoma have very poor 5-year survival rate. AIS can develop into invasive lung adenocarcinoma. The investigation and comparison of AIS and invasive lung adenocarcinoma at the genomic level can deepen our understanding of the mechanisms underlying lung cancer development.

Results

In this study, we identified 61 lung adenocarcinoma (LUAD) invasive-specific differentially expressed genes, including nine long non-coding RNAs (lncRNAs) based on RNA sequencing techniques (RNA-seq) data from normal, AIS, and invasive tissue samples. These genes displayed concordant differential expression (DE) patterns in the independent stage III LUAD tissues obtained from The Cancer Genome Atlas (TCGA) RNA-seq dataset. For individual invasive-specific genes, we constructed subnetworks using the Genetic Algorithm (GA) based on protein-protein interactions, protein-DNA interactions and lncRNA regulations. A total of 19 core subnetworks that consisted of invasive-specific genes and at least one putative lung cancer driver gene were identified by our study. Functional analysis of the core subnetworks revealed their enrichment in known pathways and biological progresses responsible for tumor growth and invasion, including the VEGF signaling pathway and the negative regulation of cell growth.

Conclusions

Our comparison analysis of invasive cases, normal and AIS uncovered critical genes that involved in the LUAD invasion progression. Furthermore, the GA-based network method revealed gene clusters that may function in the pathways contributing to tumor invasion. The interactions between differentially expressed genes and putative driver genes identified through the network analysis can offer new targets for preventing the cancer invasion and potentially increase the survival rate for cancer patients.

     

Identification of NaCl and NaHCO3 stress responsive proteins in tomato roots using iTRAQ-based analysis

Soil salinity and alkalinity are common constraints to crop productivity in low rainfall regions of the world. However, the physiological difference of plant response to these two stresses was short of deep investigation. This study has identified a set of differentially expressed proteins of tomato root exploring to NaCl and NaHCO₃ stress by iTRAQ (isobaric tags for relative and absolute quantitation) assay. A total of 313 proteins responsive to NaCl and NaHCO₃ were observed. Among these proteins, 70 and 114 proteins were up-regulated by salt and alkali stress, respectively. While down-regulated proteins were 80 in salt treatment and 83 in alkali treatment. Only 39 up-regulated proteins and 30 down-regulated proteins were shared by salt and alkali stresses. The majority of the down-regulated proteins accounted for metabolism and energy conversion, and the up-regulated proteins were involved in signaling or transport. Compared with salt stress, alkali stress down-regulated proteins related with the respiratory metabolism, fatty acid oxidative metabolism and nitrogenous metabolism of tomato roots, and up-regulated protein with the reactive oxygen species (ROS) scavenging and ion transport. This study provides a novel insight into tomato roots response to salt and alkali stress at a large translation level.     

细胞因子基因转导对人乳腺癌细胞MHC抗原及细胞膜糖蛋白表达的影响

为探讨细胞因子基因(人IL-2、IL-6)转导对于肿瘤细胞膜MHC抗原及细胞膜糖蛋白表达调控的影响,本文利用脂质体介导的方法,将含人IL-6、IL-2基因的逆转录病毒载体分别导入人乳腺癌细胞系MCF-7细胞中,采用间接免疫荧光染色流式细胞仪测定法,对基因转导的瘤细胞细胞膜糖蛋白及MHC抗原表达进行测定。结果表明经两种基因修饰的MCF-7细胞MHCⅠ型抗原表达均获得增强,此外,基因转导细胞可程度不同地表现出细胞膜多种糖蛋白表达的变化。提示肿瘤细胞膜抗原及糖蛋白表达的改变可能是细胞因子基因转导影响肿瘤细胞免疫原性的重要结构基础。     

Effects of <Emphasis Type="Italic">TFAR19</Emphasis> gene on the growth and biorheological properties of mouse erythroleukemia cell line MEL

Using the method of gene transfection with liposome, we obtained the mouse erythroleukemia cell line MEL-TF19, which stably carries TFAR19, a novel apoptosis-related gene. The expression of TFAR19 was detected by Western blot. Growth curve and flow cytometry analysis showed that after being transfected with TFAR19 gene, the growth of MEL-TF19 is suppressed and its apoptosis is accelerated because of the serum deprivation. Our biorheological study indicated that in the apoptotic process, compared with MEL cells, MEL-TF19 cells exhibit larger osmotic fragility, lower cell surface charge density, increased elastic modulus K1 which is inversely proportional to cells' maximal deformation ability, obviouslydiminished surface viscosity μ, with elastic modulus K2 having no distinct changes. The above results provided some bases for recognizing the function of TFAR19 completely from the viewpoint of biorheology.     

Novel Bacillus thuringiensis δ-endotoxin active against Locusta migratoria manilensis

A novel δ-endotoxin gene was cloned from a Bacillus thuringiensis strain with activity against Locusta migratoria manilensis by PCR-based genome walking. The sequence of the cry gene was 3,432 bp long, and it encoded a Cry protein of 1,144 amino acid residues with a molecular mass of 129,196.5 kDa, which exhibited 62% homology with Cry7Ba1 in the amino acid sequence. The δ-endotoxin with five conserved sequence blocks in the amino-terminal region was designated Cry7Ca1 (GenBank accession no. {"type":"entrez-nucleotide","attrs":{"text":"EF486523","term_id":"1121787749","term_text":"EF486523"}}EF486523). Protein structure analysis suggested that the activated toxin of Cry7Ca1 has three domains: 227 residues forming 7 α-helices (domain I); 213 residues forming three antiparallel β-sheets (domain II); and 134 residues forming a β-sandwich (domain III). The three domains, respectively, exhibited 47, 44, and 34% sequence identity with corresponding domains of known Cry toxins. SDS-PAGE and Western blot analysis showed that Cry7Ca1, encoded by the full-length open reading frame of the cry gene, the activated toxin 1, which included three domains but without the N-terminal 54 amino acid residues and the C terminus, and the activated toxin 2, which included three domains and N-terminal 54 amino acid residues but without the C terminus, could be expressed in Escherichia coli. Bioassay results indicated that the expressed proteins of Cry7Ca1 and the activated toxins (toxins 1 and 2) showed significant activity against 2nd instar locusts, and after 7 days of infection, the estimated 50% lethal concentrations (LC₅₀s) were 8.98 μg/ml for the expressed Cry7Ca1, 0.87 μg/ml for the activated toxin 1, and 4.43 μg/ml for the activated toxin 2. The δ-endotoxin also induced histopathological changes in midgut epithelial cells of adult L. migratoria manilensis.     

不同培养料和发酵次数栽培巴氏菇比较

分别以玉米秸秆和稻草为培养料栽培巴氏菇,对菌丝生长性状进行对比;同时,在我国传统发酵栽培方法的基础上,将三次发酵法与二次发酵法进行了对比。试验结果表明:利用玉米秸秆栽培的巴氏菇在发菌速度及子实体质量和产量上均优于稻草;培养料经过3次发酵更适宜巴氏菇生长。经过3次发酵的玉米秸秆培养料栽培的巴氏菇产量和生物学效率分别为7.7 kg/m2和27.5%,子实体粗蛋白含量44.89%,可溶性糖含量44.01%,18种氨基酸总量31.70%,明显高于2次发酵的玉米秸秆培养料及2次、3次发酵的稻草培养料。     

具有杀镰孢菌素合成功能基因菌株的筛选与鉴定

在NCBI数据库中搜索已知多黏类芽孢杆菌基因组中分别编码Fusaricidin合成酶3个NRPS功能区段的核苷酸保守序列,利用Primer5.0软件设计3对引物,对供试的95个细菌菌株进行PCR检测,筛选到1株阳性菌株T99,其3对引物扩增产物的测序结果表明,所得3个功能片段核苷酸序列与多黏类芽孢杆菌SC2和M1的Fusaricidin合成酶基因序列的一致性分别为99％、97％和99％,说明菌株T99基因组中具有Fusaricidin合成相关功能基因.结合形态特征及培养性状、生理生化特性和16SrDNA序列同源性分析的结果,将菌株T99鉴定为多黏类芽孢杆菌.     

长江口及其邻近水域冬季浮游植物群集

应用Uterm hl方法分析了2005年2月28日至3月10日在长江口及其邻近水域进行的大面调查所获浮游植物采水样品,报道了该水域浮游植物的群落特征.初步鉴定浮游植物5门67属130种(含未定名25种).调查水域浮游植物群落主要由硅藻组成,其次为甲藻,此外还有少量的金藻、蓝藻和绿藻.主要优势种为具槽帕拉藻(Paralia sulcata)、中肋骨条藻(Skeletonema costatum)、圆海链藻(Thalassiosira rotula)、标志布莱克里亚藻(Bleakeleya nota-ta)、辐射圆筛藻(Coscinodiscus radiatus)和离心列海链藻(Thalassiosira excentrica).调查区浮游植物的细胞丰度介于0.1~90.0cells.ml-1,平均值为10.1cells.ml-1.浮游植物的水平分布特征是近岸处浮游植物丰度高,远岸处丰度低.水体表层的浮游植物细胞丰度最高,表层之下细胞丰度略有降低,但变化不大.浮游植物的细胞丰度和叶绿素a与硝酸盐、亚硝酸盐、铵盐、磷酸盐和硅酸盐浓度呈显著正相关,而与盐度呈负相关.调查区中部香农-威纳多样性指数和Pielou均匀度指数较高,而东北部和近岸水域较低.     

黑脊倒刺鲃精巢结构和精子发生的研究

用光学显微镜和电子显微镜研究了黑脊倒刺鲃精巢的组织结构和精子发生过程。精巢属于小叶型,由精小叶、小叶间质、壶腹腔和输出管构成。精小叶由各期生精细胞和支持细胞构成。除初级精原细胞以外的各期生精细胞和支持细胞组成了精小囊。每一精小囊中的生精细胞发育同步。成熟的精子从精小囊中释放出来,进入小叶腔中。在精巢的腹侧,小叶腔与壶腹腔连接。在壶腹腔的外侧,有一条与壶腹腔平行的输出管。壶腹腔与输出管相通。在壶腹腔和输出管中都充满精子。精巢的后端与贮精囊相连。贮精囊中充满形状不规则的腔隙。腔隙中有精子分布。输出管从精巢延伸出来,进入贮精囊中,位于贮精囊的一侧。左右两个贮精囊通向一条共同的输精管。输精管上皮具有分泌功能。精子发生在精小叶中进行。精子发生经历了初级精原细胞、次级精原细胞、初级精母细胞、次级精母细胞和精子细胞阶段。精子细胞经过精子形成过程,形成精子。