In situ product removal in fermentation systems: improved process performance and rational extractant selection

The separation of inhibitory compounds as they are produced in biotransformation and fermentation systems is termed in situ product removal (ISPR). This review examines recent ISPR strategies employing several classes of extractants including liquids, solids, gases, and combined extraction systems. Improvement through the simple application of an auxiliary phase are tabulated and summarized to indicate the breadth of recent ISPR activities. Studies within the past 5 years that have highlighted and have discussed “second phase” properties, and that have an effect on fermentation performance, are particular focus of this review. ISPR, as a demonstrably effective processing strategy, continues to be widely adopted as more applications are explored; however, focus on the properties of extractants and their rational selection based on first principle considerations will likely be key to successfully applying ISPR to more challenging target molecules.     

Determining Euzonus mucronata Burrowing Rates with Application to Ancient Macaronichnus segregatis Trace-makers

Assessing the temporal significance of invertebrate ichnofossils is essential in interpreting ancient organism behaviors, depositional settings, and bioturbation and sedimentation rates. The trace fossil, Macaronichnus segregatis, is known to represent the work of deposit-feeding polychaetes and commonly occurs as a pervasive structure in shallow-marine sandstone deposits. This study uses the polychaete Euzonus mucronata, which produces M. segregatis-like structures, as a modern analogue to the trace-making counterparts. Field measurements from Pachena Beach, Vancouver Island, Canada, included assessment of population densities and worm behaviors. Volumetric burrowing rates were obtained from a thin-walled aquarium constructed in the laboratory. The burrowing rate calculated for 5 Euzonus (0.089 cm³/hr) was extrapolated to populations (approximately 1,400–5,000 worms/m²) estimated from Pachena Beach, which require 70–300 days to completely rework 0.1 m³ of sediment. Calculated rates are dependent upon the limitations of simulating a natural setting in an aquarium, the population density assessment, and the particular characteristics of the worm population and foreshore at Pachena Bay. However, these initial estimates can still be applied to rock record examples such as the Macaronichnus segregatis found in the Appaloosa Sandstone of Alberta, Canada. In this unit, ancient worms persisted in dense populations and reworked sediment at a rate that exceeded deposition during overall foreshore aggradation.     

Current trends in cardiac rehabilitation

Cardiac rehabilitation can reduce mortality and morbidity for patients with many types of cardiac disease cost-effectively, yet is generally underutilized. Rehabilitation is helpful not only for patients who have had a myocardial infarction but also for those with stable angina or congestive heart failure or those who have undergone myocardial revascularization procedures, a heart transplant or heart valve surgery. The beneficial effects of rehabilitation include a reduction in the rate of death from cardiovascular disease, improved exercise tolerance, fewer cardiac symptoms, improved lipid levels, decreased cigarette smoking, improvement in psychosocial well-being and increased likelihood of return to work. Rehabilitation involves a multidisciplinary team that focuses on education, individually tailored exercise, risk-factor modification and the optimization of functional status and mental health. Current research trends in this area include the evaluation of new secondary-prevention modalities and alternative program options, such as home-based rehabilitation.     

How fast do marine invertebrates burrow?

The burrowing of bivalves, arthropods, and echinoderms collected from tidal flats and shallow subtidal sediments of the Ogeechee estuary, Georgia, U.S.A was analyzed using time-elapse, X-ray analysis of thin-walled aquaria. The rate of sediment intrusion was determined for each animal. Burrowing rates ranged between 0.01 and 0.15 cm³/h for suspension-feeding animals. Deposit-feeding animals moved between 1 and 10 cm³ of sand per hour, approximately 10 to 100 times more sediment than the suspension feeders moved over similar times.Neoichnological experiments show that ten filter-feeding individuals could take as long as 115 yr to churn a 1 m² plot of sediment, by indexing the measured burrowing rates to realistic animal population densities. Ten such mobile deposit feeders as irregular echinoderms could bioturbate the same sediment in just 42 days. Under the maximum population densities modeled, the animals could bioturbate the sediment plot in 61 min. Given the reported results, qualitative interpretation of the rock record is possible: highly burrowed examples of the Skolithos Ichnofacies reflect high population densities and at least seasonal time spans. Highly burrowed examples of the Cruziana Ichnofacies may represent moderate population densities and short time spans.     

Diel movement of smallmouth yellowfish Labeobarbus aeneus in the Vaal River,South Africa

Diel movements of Orange–Vaal smallmouth yellowfish Labeobarbus aeneus (Burchell, 1822) in the Vaal River, South Africa, were determined by externally attaching radio transmitters to 11 adult fish and manually tracking them between March and May 2012. Twenty-four radio telemetry monitoring surveys produced 2 304 diel tracks. At night, yellowfish displayed a preference for slow shallow (<0.3?m s?1, <0.5?m) and fast shallow habitats (>0.3?m s?1, <0.3?m), whereas by day they avoided these habitats, preferring fast deep areas (>0.3?m s?1, >0.3?m). The average total distance of 272?m moved per 24-hour period was three times greater than the diel range, and the average maximum displacement per minute was significantly higher in daytime (4?m) than at night (1.5?m). These findings suggest that L. aeneus is active primarily during the day in fast-flowing, deeper waters, and relatively inactive at night, when it occupies shallower habitats. This behaviour should be further explored to identify causal mechanisms underlying the diel habitat shifts in this species such as water temperature, foraging tactics and/or predator avoidance.     

Thaumatin-like proteins are differentially expressed and localized in phloem tissues of hybrid poplar

Background  

Two thaumatin-like proteins (TLPs) were previously identified in phloem exudate of hybrid poplar (Populus trichocarpa × P. deltoides) using proteomics methods, and their sieve element localization confirmed by immunofluorescence. In the current study, we analyzed different tissues to further understand TLP expression and localization in poplar, and used immunogold labelling to determine intracellular localization.     

Production of 4-valerolactone by an equilibrium-limited transformation in a partitioning bioreactor: impact of absorptive polymer properties

The biotransformation of levulinic acid to 4-valerolactone (4VL) is pH-dependent and equilibrium limited, distinct from the more common irreversible biotransformations that are constrained by product toxicity or biocatalyst inhibition. Our processing strategy for this system was to selectively remove the product, 4VL, which is in equilibrium with its precursor, 4-hydroxyvalerate (4HV), to pull the reaction to a greater extent of conversion. 4VL is challenging to separate from the aqueous phase due to its water miscibility, necessitating the use of water-absorbing polymers to provide affinity toward the hydrophilic product. Manipulating the composition of copolymers, thereby varying the architecture of polymer chains, conferred drastically different extents of water absorption and caused different biotransformation outcomes. A custom-synthesized random copolymer designed to maximize the proportion of material with affinity for the solute had high water uptake, which resulted in the poor selectivity for the target molecule relative to its precursor. Conversely, a moderately water-absorbing commercial segmented block copolymer, Hytrel^® 8206, demonstrated selectivity toward 4VL relative to its precursor, 4HV, and increased 4VL production by approximately 30 % by shifting the equilibrium toward the product. This work has shown that water absorption is an important, previously neglected criterion in evaluating polymer affinity and selectivity toward hydrophilic target molecules.