高通量测序技术及其在微生物学研究中的应用

20世纪70年代发明的核酸测序技术为基因组学及其相关学科的发展做出了巨大贡献,本世纪初发展的以Illumina公司的HiSeq 2000,ABI公司的SOLID,和Roche公司的454技术为代表的高通量测序技术又为基因组学的发展注入了新活力.本文在阐述这些技术的基础上,着重讨论了新一代测序技术在微生物领域中的应用.     

Angiostatin production in cultivation of recombinant Pichia pastoris fed with mixed carbon sources

A recombinant strain of Pichia pastoris with a phenotype of Mut^S was used to produce angiostatin. Due to the low methanol consumption rate of this strain, both methanol and glycerol feedings, that produced oscillation in dissolved O₂ concentration, were used during the expression phase to improve cell growth and angiostatin expression. However, enhanced cell growth led to nitrogen limitation that suppressed further production of angiostatin, but addition of ammonia allowed angiostatin concentration to reach 108 mg l^–1 after an expression period of 96 h. The ratio of consumed glycerol to methanol of 1.5:1 (w/w) in the expression phase suggested that methanol played an important role in the metabolism of carbon sources.     

Characterization and identification of Sox2+ radial glia cells derived from rat embryonic cerebral cortex

During the central nervous system (CNS) development, radial glia cells (RGCs) play at least two essential roles, they contribute to neuronal production and the subsequent guidance of neuronal migration, whereas its precise distribution and contribution to cerebral cortex remains less understood. In this research, we used Vimentin as an astroglial marker and Sox2 as a neural progenitor marker to identify and investigate RGCs in rat cerebral cortex at embryonic day (E) 16.5. We found that the Sox2+ progenitor cells localized in the germinal zone (GZ) of E16.5 cerebral cortex, ~95% Sox2+ cells co-localized with Vimentin+ or Nestin+ radial processes which extended to the pial surface across the cortical plate (CP). In vitro, we obtained RG-like cells from E16.5 cerebral cortex on adherent conditions, these Sox2+ Radial glia (RG)-like cells shared some properties with RGCs in vivo, and these Sox2+ RG-like cells could differentiate into astrocytes, oligodendrocytes and presented the radial glia—neuron lineage differentiation ability. Taken together, we identified and investigated some characterizations and properties of Sox2+ RGCs derived from E16.5 cerebral cortex, we suggested that the embryonic Sox2+ progenitor cells which located in the cortical GZ were mainly composed of Sox2+ RGCs, and the cortex-derived Sox2+ RG-like cells displayed the radial glia—neuron lineage differentiation ability as neuronal progenitors in vitro.     

取食转Bt基因棉花上的棉蚜对丽草蛉发育和繁殖的影响

为明确转Bt基因抗虫棉对捕食性天敌的生态效应 ,比较了 2种转Bt基因抗虫棉 (GK-1 2和新棉99B)和 1种常规棉上的棉蚜Chrysopaformosa对丽草蛉Aphisgossypii发育和繁殖的影响。结果表明 ,(1 )与取食常规棉泗棉 3号上棉蚜的对照相比 ,取食转Bt基因抗虫棉GK- 1 2上棉蚜的第 1代和第 2代丽草蛉 ,其幼虫期和茧期的死亡率、幼虫和茧的发育历期、茧重及成虫性比等均与对照无显著差异 ;但第 1代成虫的产卵量减少了 2 88 0粒 ,与对照差异显著 (P <0 . 0 1 ) ;第 2代成虫所产卵的孵化率为 64. 0 % ,显著低于对照的 77. 7% (P <0 0 1 )。 (2 ) 2个品种的Bt棉对丽草蛉发育和繁殖的影响也略有差异。与取食GK 1 2上棉蚜的个体相比 ,取食新棉 99B上蚜虫的第 1代丽草蛉 ,其幼虫发育历期缩短了 0 . 6d(P <0 0 1 ) ,茧期缩短了 0 . 7d(P <0 . 0 1 ) ,茧重降低了 1 . 2mg(P <0 .0 1 ) ,幼虫期和茧期的死亡率、茧重以及成虫性比等则无显著差异 ;雌成虫产卵前期、产卵期、产卵量和寿命等繁殖学特性也无显著差异 ,但其成虫所产卵的孵化率为 65. 0 % ,显著低于取食GK- 1 2上棉蚜的处理 (72 . 7% ,P <0. 0 1 )。分别取食 2种Bt棉上的棉蚜 ,对第 2代丽草蛉的发育和繁殖的影响差异则较小。     

虚拟生物实验室实例

虚拟生物实验室在生物课程资源中有巨大并且尚未开发的潜力。它对于不同级别学生的学习都是有利的。介绍了虚拟生物实验室的一些实例。并展望了其应用前景。     

鄂伦春族体质现状及其与60年前资料的比较

对内蒙古鄂伦春自治旗１９１名（男８５,女１０６）,鄂伦春族成的人进行了活体观察与测量,总结了鄂伦春的体质和类型并在城乡之间、与６０年前同一地区的资料及我国北方一些的体质数据进行了比较。     

General Information

A novel cDNA clone encoding a COR413-like gene was isolated by suppression subtraction hybridization and cDNA library screening from sea-island cotton (Gossypium barbadense). This gene (designated as GbCOR413, Accession number: AY761065) has a total length of 893 bp with an open reading frame of 600 bp, encoding a predicated polypeptide of 200 amino acids with a molecular weight of 22.74 kDa and a predicated pI of 9.2. Bioinformatics analyses revealed that this gene belonged to a novel stress-regulated multi-spanning transmembrane protein family without signal peptide. By means of semi-quantities RT-PCR analysis, the expression of GbCOR413 under short-term cold treatment at 4°C, water submergence and abscic acid treatment was investigated. Our studies suggested that the cloned gene was a new member of COR gene family which was slowly responsive to cold stress in cotton. Jin Wang and Kai-Jing Zuo are co-first authors of this paper.     

环孢素A对人早孕期滋养细胞MMP-9与MMP-2表达的调控作用

本研究的目的是探讨环孢素A对人早孕期滋养细胞侵袭能力及基质金属蛋白酶9与2 (matrix metalloproteinase 9 and 2,简称MMP-9与MMP-2)表达的调节作用,为治疗反复自然流产等妊娠疾患提供新的线索。侵袭试验观察CsA对人早孕期滋养细胞侵袭能力的调节作用;RT-PCR与明胶酶谱分析CsA对滋养细胞MMP-9与MMP-2 mRNA及蛋白水平表达的影响;In-cell West- ern检测CsA作用后滋养细胞ERK1/2磷酸化水平。结果发现,1．0μmol/L CsA明显增强滋养细胞侵袭能力,MEK激酶抑制剂U0126可抑制CsA对滋养细胞的促侵袭作用;1．0μmol/L CsA可诱导MMP- 9与MMP-2基因的转录与蛋白分泌;该诱导效应同样可被U0126所阻滞;1．0μmol/L CsA以时间依赖方式促进ERK1/2的磷酸化。结果表明,CsA可激活ERK1/2,通过MAPK/ERK1/2途径促进滋养细胞MMP-9与MMP-2基因的转录与蛋白分泌,从而增强滋养细胞的侵袭能力,对滋养细胞生物学功能具有良性调节作用。     

FACE水稻生育期模拟

利用农田开放式空气CO2浓度增高（FACE）技术平台,设置大气CO2浓度比对照高200μmol mol^-1的FACE处理和不同的施N量水平,以水稻钟模型为基础,构建了FACE水稻生育期模拟模型。通过不同年度试验数据的检验,表明模型对CK及FACE条件下水稻不同生育期天数的预测性能好。不同生育期预测误差的根均方差（RMSE）最大为2．64d,最小只有0．15d,且相关系数均达到了极显著水平。说明FACE水稻生育期模型具有较高的预测性和适用性。     

渗透胁迫下白花柽柳消减文库的构建及分析

用PEG6000对白花柽柳进行渗透胁迫,以其叶部cDNA为试验方（tester）,正常生长的白花柽柳叶部cDNA为驱动方（driver）,利用抑制性消减杂交技术（SSH）构建了渗透胁迫下白花柽柳的消减文库。提取重组质粒经PCR检测,插入片段大部分集中在250～650 bp之间。通过对文库阳性克隆的随机测序,获得了如脯氨酸转移蛋白、钙依赖蛋白激酶、亮氨酸拉链蛋白、类转录起始因子蛋白等23个与渗透胁迫有关的EST,它们涉及了植物的渗透调节、信号传递、基因调控、活性氧清除、新陈代谢等生理生化过程。