Differential responses in two varieties of winter wheat to elevated ozone concentration under fully open‐air field conditions

Two modern cultivars [Yangmai16 (Y16) and Yangfumai 2 (Y2)] of winter wheat (Triticum aestivum L.) with almost identical phenology were investigated to determine the impacts of elevated ozone concentration (E‐O₃) on physiological characters related to photosynthesis under fully open‐air field conditions in China. The plants were exposed from the initiation of tillering to final harvest, with E‐O₃ of 127% of the ambient ozone concentration (A‐O₃). Measurements of pigments, gas exchange rates, chlorophyll a fluorescence and lipid oxidation were made in three replicated plots throughout flag leaf development. In cultivar Y2, E‐O₃ significantly accelerated leaf senescence, as indicated by increased lipid oxidation as well as faster declines in pigment amounts and photosynthetic rates. The lower photosynthetic rates were mainly due to nonstomatal factors, e.g. lower maximum carboxylation capacity, electron transport rates and light energy distribution. In cultivar Y16, by contrast, the effects of E‐O₃ were observed only at the very last stage of flag leaf ageing. Since the two cultivars had almost identical phenology and very similar leaf stomatal conductance before senescence, the greater impacts of E‐O₃ on cultivars Y2 than Y16 cannot be explained by differential ozone uptake. Our findings will be useful for scientists to select O₃‐tolerant wheat cultivars against the rising surface [O₃] in East and South Asia.     

Expression of collier in the premandibular segment of myriapods: support for the traditional Atelocerata concept or a case of convergence?

Background  

A recent study on expression and function of the ortholog of the Drosophila collier (col) gene in various arthropods including insects, crustaceans and chelicerates suggested a de novo function of col in the development of the appendage-less intercalary segment of insects. However, this assumption was made on the background of the now widely-accepted Pancrustacea hypothesis that hexapods represent an in-group of the crustaceans. It was therefore assumed that the expression of col in myriapods would reflect the ancestral state like in crustaceans and chelicerates, i.e. absence from the premandibular/intercalary segment and hence no function in its formation.     

Phylogeographic and demographic effects of Pleistocene climatic fluctuations in a montane salamander, Plethodon fourchensis

Climatic changes associated with Pleistocene glacial cycles profoundly affected species distributions, patterns of interpopulation gene flow, and demography. In species restricted to montane habitats, ranges may expand and contract along an elevational gradients in response to environmental fluctuations and create high levels of genetic variation among populations on different mountains. The salamander Plethodon fourchensis is restricted to high-elevation, mesic forest on five montane isolates in the Ouachita Mountains. We used DNA sequence data along with ecological niche modelling and coalescent simulations to test several hypotheses related to the effects of Pleistocene climatic fluctuations on species in montane habitats. Our results revealed that P. fourchensis is composed of four well-supported, geographically structured lineages. Geographic breaks between lineages occurred in the vicinity of major valleys and a narrow high-elevation pass. Ecological niche modelling predicted that environmental conditions in valleys separating most mountains are suitable; however, interglacial periods like the present are predicted to be times of range expansion in P. fourchensis . Divergence dating and coalescent simulations indicated that lineage diversification occurred during the Middle Pleistocene via the fragmentation of a wide-ranging ancestor. Bayesian skyline plots showed gradual decreases in population size in three of four lineages over the most recent glacial period and a slight to moderate amount of population growth during the Holocene. Our results not only demonstrate that climatic changes during the Pleistocene had profound effects on species restricted to montane habitats, but comparison of our results for P. fourchensis with its parapatric, sister taxon, P. ouachitae , also emphasizes how responses can vary substantially even among closely related, similarly distributed taxa.     

Early Palaeogene Louisinidae (Macroscelidea,Mammalia), their relationships and north European diversity

Seventeen species from the Palaeocene and Early Eocene of northern Europe, of which 12 are new, are described belonging to the extinct macroscelidean family Louisinidae, raised here from subfamily rank. These species belong to nine genera, of which five are new. The new genera are Walbeckodon , Berrulestes , Gigarton , Thryptodon , and Prolouisina . The new species are Walbeckodon krumbiegeli , Walbeckodon girardi , Paschatherium levei , Berrulestes phelizoni , Berrulestes pellouini , Berrulestes poirieri , Gigarton meyeri , Gigarton sigogneauae , Gigarton louisi , Thryptodon brailloni , Louisina marci , and Teilhardimys brisswalteri . Prolouisina is erected for ‘Louisina’atavella Russell, 1964. Cladistic analysis was undertaken to understand the relationships within the Louisinidae and between them and the North American family Apheliscidae, in which they had earlier been included as a subfamily. Louisinidae are shown to be sister group to a clade consisting of Apheliscidae plus Amphilemuridae and part of a paraphyletic and polyphyletic Adapisoricidae, all of which are tentatively considered to be stem members of the order Macroscelidea. The most primitive macroscelidid, Chambius, from the Early Eocene of northern Africa is nested within Apheliscidae when postcranial characters were included, but in a majority of cases within the Louisinidae when postcranial characters were excluded. Most species from northern Europe became extinct at the end of the Palaeocene, although the genus Paschatherium survived for much of the Early Eocene and Teilhardimys survived into the earliest Eocene. © 2012 The Linnean Society of London, Zoological Journal of the Linnean Society, 2012, 164 , 856–936.     

Distribution and regulation of urea in lakes of central North America

1. Urea accounts for ～50% of global nitrogen (N)‐based fertiliser; however, little is known of the factors regulating its distribution and abundance in freshwaters. Improved understanding of urea biogeochemistry is essential because its use as fertiliser is expected to double by 2050 and because pollution with urea can promote outbreaks of toxic cyanobacteria in phosphorus (P)‐rich lakes in regions with intensive agricultural or urban development. 2. Biweekly measurements of urea concentration and diverse limnological variables (water chemistry, hydrology, algae, zooplankton) were taken during two summers (2008, 2009) in a chain of seven productive lakes within a 52 000‐km² catchment in central Canada to quantify environmental and anthropogenic correlates of temporal and spatial patterns of urea occurrence. 3. Mean (±SD) urea concentrations varied between 29 ± 14 and 132 ± 65 μg N L^?1, generally increased from headwater to downstream sites and represented 10–50% of bioavailable N (as sum of , and urea). Principal components analysis demonstrated that urea concentrations were elevated in agriculturally impacted lakes with abundant dissolved organic and inorganic nutrients (N, P, C) and low O₂ concentrations, but were not correlated consistently with plankton abundance or community composition. Urea concentrations were more than twofold greater in lakes receiving N from cities than in agriculturally affected basins, despite low summer concentrations of urea in tertiary‐treated urban effluent (c. 50% of lake values). Multiple regression models evaluated using Akaike Information Criterion showed that mean water‐column O₂ concentration was the single best predictor of in situ urea concentrations (r² = 0.91, P = 0.002), but that urea concentrations were also correlated significantly with changes in longitudinal position and Secchi depth and with concentrations of , non‐urea dissolved organic N (DON) and dissolved inorganic carbon. 4. Additional seasonal surveys of up to 69 closed‐basin lakes within a 100 000‐km² region during 2004 and 2008 revealed that urea was abundant in 100% of measured sites and exhibited concentrations (81 ± 48 μg N L^?1) similar to those observed in lakes with surface drainage (58 ± 38 μg N L^?1). Further, non‐urea DON accounted for 50–99% of the total dissolved N pool in both open‐ and closed‐basin lakes. 5. When combined with an extensive literature review and previous mass‐budget analyses of the study lakes, these findings allowed the development of a first‐generation model of the mechanisms regulating urea content of P‐rich lakes of central North America. In this model, water‐column concentrations of urea are predicted to be regulated mainly by algal decomposition in anoxic environments (sediments, hypolimnion), followed by redistribution into surface waters. Consequently, anthropogenic activities can increase the urea content of lakes by stimulating primary production, sedimentation and deepwater anoxia and by increasing influx of undegraded urea from agricultural and urban sources.     

Systems analysis of primary Sjögren's syndrome pathogenesis in salivary glands identifies shared pathways in human and a mouse model

Bone tissue has an exceptional quality to regenerate to native tissue in response to injury. However, the fracture repair process requires mechanical stability or a viable biological microenvironment or both to ensure successful healing to native tissue. An improved understanding of the molecular and cellular events that occur during bone repair and remodeling has led to the development of biologic agents that can augment the biological microenvironment and enhance bone repair. Orthobiologics, including stem cells, osteoinductive growth factors, osteoconductive matrices, and anabolic agents, are available clinically for accelerating fracture repair and treatment of compromised bone repair situations like delayed unions and nonunions. Preclinical and clinical studies using biologic agents like recombinant bone morphogenetic proteins have demonstrated an efficacy similar or better than that of autologous bone graft in acute fracture healing. A lack of standardized outcome measures for comparison of biologic agents in clinical fracture repair trials, frequent off-label use, and a limited understanding of the biological activity of these agents at the bone repair site have limited their efficacy in clinical applications.     

Clinical features and predictors for disease natural progression in adults with Pompe disease: a nationwide prospective observational study

Background

Due partly to physicians’ unawareness, many adults with Pompe disease are diagnosed with great delay. Besides, it is not well known which factors influence the rate of disease progression, and thus disease outcome. We delineated the specific clinical features of Pompe disease in adults, and mapped out the distribution and severity of muscle weakness, and the sequence of involvement of the individual muscle groups. Furthermore, we defined the natural disease course and identified prognostic factors for disease progression.

Methods

We conducted a single-center, prospective, observational study. Muscle strength (manual muscle testing, and hand-held dynamometry), muscle function (quick motor function test), and pulmonary function (forced vital capacity in sitting and supine positions) were assessed every 3–6 months and analyzed using repeated-measures ANOVA.

Results

Between October 2004 and August 2009, 94 patients aged between 25 and 75 years were included in the study. Although skeletal muscle weakness was typically distributed in a limb-girdle pattern, many patients had unfamiliar features such as ptosis (23%), bulbar weakness (28%), and scapular winging (33%). During follow-up (average 1.6 years, range 0.5-4.2 years), skeletal muscle strength deteriorated significantly (mean declines of ?1.3% point/year for manual muscle testing and of ?2.6% points/year for hand-held dynamometry; both p<0.001). Longer disease duration (>15 years) and pulmonary involvement (forced vital capacity in sitting position <80%) at study entry predicted faster decline. On average, forced vital capacity in supine position deteriorated by 1.3% points per year (p=0.02). Decline in pulmonary function was consistent across subgroups. Ten percent of patients declined unexpectedly fast.

Conclusions

Recognizing patterns of common and less familiar characteristics in adults with Pompe disease facilitates timely diagnosis. Longer disease duration and reduced pulmonary function stand out as predictors of rapid disease progression, and aid in deciding whether to initiate enzyme replacement therapy, or when.

     

Anthropogenic causes of the western Steller sea lion Eumetopias jubatus population decline and their threat to recovery

• 1 The western Steller sea lion Eumetopias jubatus population has experienced a chronic decline since the 1960s. The causes are likely multifactorial and a combination of anthropogenic and natural factors. A draft revised recovery plan for the Steller sea lion has been published by the US National Marine Fisheries Service, listing both anthropogenic and natural factors that may have contributed to the observed decline or which may be a threat to the recovery of the western Steller sea lion population. The purpose of this review is to consider the anthropogenic threats to this stock.
• 2 Anthropogenic sources of mortality include fisheries competition resulting in nutritional stress, mortality incidental to commercial fisheries (i.e. fisheries by‐catch), subsistence hunts, legal and illegal shooting, commercial hunts, anthropogenic‐related contamination, and research‐induced mortalities.
• 3 We present evidence that the following anthropogenic factors likely contributed to the decline of the western Steller sea lion population over the last 40 years: (i) mortality incidental to commercial fisheries (i.e. by‐catch); (ii) commercial hunting of western Steller sea lions; and (iii) legal and illegal shooting; whereas the subsistence hunts for western Steller sea lions and mortality incidental to research were not likely to be contributors to the observed decline.
• 4 Further, we present evidence that the following can be excluded as significant anthropogenic threats to the recovery of the western Steller sea lion population: (i) mortality incidental to commercial fishing; (ii) legal and illegal shooting; (iii) commercial hunts of Steller sea lions; (iv) subsistence hunting; and (v) mortality incidental to research.
• 5 Competition with fisheries resulting in nutritional stress, and the potential impacts of contaminants, are two anthropogenic factors that should continue to be a priority for the various organizations currently doing research on this population.