Ribosomes,G-factor and Siomycin

G-factor interacts with the 50S ribo-somal subunit at a site which is distinct from the peptidyl transferase centre and which is inactivated by siomycin.     

New Axonemal Dynein Heavy Chains from Tetrahymena thermophila

Two dyneins can be extracted from Tetrahymena ciliary axonemes. The 22S dynein contains three heavy chains (HC), sediments at 22S in a sucrose gradient, and makes up the outer arms. The 14S dynein contains two to six HCs, sediments at 14S, and is thought to contribute to formation of the inner arms. We have identified two large proteins that are extracted from Tetrahymena axonemes with high salt and that sediment together at approximately 18S. The two large proteins cleave when subjected to UV light in the presence of ATP and vanadate, suggesting both proteins are dynein HC. Antibodies against one of the 18S HCs do not recognize 22S dynein HCs. Antibodies to 22S dynein HC do not bind appreciably to 18S dynein photocleavage fragments. Taken together, these results indicate that the large proteins that sediment at 18S are axonemal dynein heavy chains.     

Evaluating the population‐level impact of an invasive species,Ring‐necked Parakeet Psittacula krameri,on native avifauna

The introduction of exotic species to ecosystems can have severe consequences for populations of native organisms, but logistical limitations and shortage of historical data often hinder attempts to quantify the ecological implications of such relationships. The establishment and rapid expansion of Ring‐necked Parakeets Psittacula krameri in England therefore presents a rare opportunity to apply novel analytical methods to existing extensive national bird monitoring data from the UK Breeding Bird Survey for an invasive species. A previous study from Belgium suggests that Ring‐necked Parakeets have the potential to reduce the abundance of Eurasian Nuthatch Sitta europaea through competition for nesting cavities. Our analysis provides no evidence for a significant impact through competition on Nuthatch populations or those of any other cavity‐nesting species within the Parakeet’s current range in the UK. However, we cannot exclude the possibility that competitive exclusion could be occurring at a minority of sites at which availability of nest cavities is limiting. This may yet have significant implications for future conflict if Parakeets continue to increase in numbers and range.     

Is the signal from the mesophyll to the guard cells a vapour‐phase ion?

Previous studies have suggested that the red light and CO₂ responses of stomata are caused by a signal from the mesophyll to the guard cells. Experiments were conducted to test the idea that this signal is a vapour‐phase ion. Stomata in isolated epidermes of Tradescantia pallida were found to respond to air ions created by an electrode that was positioned under the epidermes. Anthocyanins in the epidermes of this species were observed to change colour in response to these air ions, and this change in colour was attributed to changes in pH. A similar change in lower epidermal colour was observed in intact leaves upon illumination and with changes in CO₂ concentration. Based on the change in epidermal colour, the pH of the epidermis was estimated to be approximately 7.0 in darkness and 6.5 in the light. Stomata in isolated epidermes responded to pH when suspended over (but not in contact with) solutions of different pH. We speculate that stomatal responses to CO₂ and light are caused by vapour‐phase ions, possibly hydronium ions that change the pH of the epidermis.     

Simulated brain tumor growth dynamics using a three-dimensional cellular automaton

We have developed a novel and versatile three-dimensional cellular automaton model of brain tumor growth. We show that macroscopic tumor behavior can be realistically modeled using microscopic parameters. Using only four parameters, this model simulates Gompertzian growth for a tumor growing over nearly three orders of magnitude in radius. It also predicts the composition and dynamics of the tumor at selected time points in agreement with medical literature. We also demonstrate the flexibility of the model by showing the emergence, and eventual dominance, of a second tumor clone with a different genotype. The model incorporates several important and novel features, both in the rules governing the model and in the underlying structure of the model. Among these are a new definition of how to model proliferative and non-proliferative cells, an isotropic lattice, and an adaptive grid lattice.     

A bioenergetic assessment of the influence of stocking practices on rainbow trout (Oncorhynchus mykiss) growth and consumption in a New Zealand lake

Summary

• 1 To investigate the carrying capacity and factors affecting growth of rainbow trout in Lake Rotoiti, we employed a bioenergetics model to assess the influence of stocking rates, timing of releases and prey abundance on growth and prey consumption. We hypothesised that stocking rates and prey abundance would affect growth and prey consumption by influencing per‐capita prey availability, and that the environmental conditions encountered by fish at the time of stocking would affect growth and consumption.
• 2 Prey consumption of stocked rainbow trout was calculated with the Wisconsin bioenergetics model. We calculated growth trajectories of released trout based on data from stocked trout that were released in spring and autumn from 1993 to 2009 and then re‐captured by anglers. Diet, prey energy density, body mass lost during spawning and lake temperature were measured locally.
• 3 Stocking timing had no effect on return rates to anglers or length or weight of caught fish. Although trout released in autumn were smaller than those released in spring, autumn‐released trout grew at a faster rate and had similar lengths and weights to spring cohorts after 2 years of growth in the lake. Modelled consumption parameters were negatively correlated with trout population size, suggesting that stocking rates (347–809 fish ha^?1 year^?1) caused density‐dependent effects on growth. Although common smelt (Retropinna retropinna) accounted for 85% of total prey consumption, no significant relationship was found between prey consumption by individual trout and adult smelt abundance, possibly because trout are targeting smaller smelt that our abundance estimate did not account for.
• 4 Releasing trout in autumn appears to be advantageous for growth, possibly because (i) temperature is more suitable for growth in autumn–winter than in spring–summer and (ii) prey for small trout is abundant in autumn. Mild winter conditions appear to enhance overwinter survival and growth of rainbow trout in warm‐temperate lakes compared to higher latitudes. This implies that moderately productive warm‐temperate lake ecosystems are highly suitable for trout growth in winter, but less so in summer, when lake stratification and high nutrient levels may create conditions suitable for algal blooms and hypolimnetic deoxygenation. High growth rates of trout in warm‐temperate lakes can therefore be supported by timing releases to coincide with favourable winter conditions.

     

A revision of the genus Paradoxostoma Fischer (Crustacea; Ostracoda) in British waters

Species of the genus Paradoxostoma Fischer are an important component of marine and estuarine ostracod faunas throughout the world. This revision of the genus in British waters deals with 17 species of which six are described as new. Each species is diagnosed and illustrated in detail, and comments are made on their ecology and distribution. The specialized mouthparts which characterize the genus are illustrated by means of the scanning electron microscope for the first time. A key to the genus is given.     

Reproduction in two submersed macrophytes declines progressively at low pH

• 1 Greenhouse experiments tested the effect of pH 5 v pH 7.5 on reproductive success for the freshwater macrophytes Najas flexilis, an annual, and Vallisneria americana, which perennates as a tuber.
• 2 Seed production by the small Najas plants grown at pH 5 averaged 0.25 seeds/plant, in contrast to 95.5 seeds/plant at pH 7.5. At low pH, Vallisneria grown from seeds produced no flowers and too few tubers to replace themselves, so that sexual reproduction failed nearly completely for both species.
• 3 Vallisneria grown from tubers produced 97% less total tuber mass at pH 5 (0.4 v 14.9 g), the compounded result of producing, on average, 89% fewer and 82% smaller tubers. The smaller tubers developed at pH 5 were less likely to overwinter in the field, and those surviving tubers subsequently grew into smaller plants.
• 4 These findings generated the hypothesis of a closing spiral: growth at low pH (and relatively low CO₂ concentrations) results in small plants that produce a smaller number of progressively smaller tubers each autumn, which in turn develop into progressively smaller plants each summer. This hypothesis was supported by field transplant experiments in two acidic Adirondack Mountain (NY) lakes.

     

Long-term survival despite low genetic diversity in the critically endangered Madagascar fish-eagle

The critically endangered Madagascar fish-eagle ( Haliaeetus vociferoides ) is considered to be one of the rarest birds of prey globally and at significant risk of extinction. In the most recent census, only 222 adult individuals were recorded with an estimated total breeding population of no more than 100–120 pairs. Here, levels of Madagascar fish-eagle population genetic diversity based on 47 microsatellite loci were compared with its sister species, the African fish-eagle ( Haliaeetus vocifer ), and 16 of these loci were also characterized in the white-tailed eagle ( Haliaeetus albicilla ) and the bald eagle ( Haliaeetus leucocephalus ). Overall, extremely low genetic diversity was observed in the Madagascar fish-eagle compared to other surveyed Haliaeetus species. Determining whether this low diversity is the result of a recent bottleneck or a more historic event has important implications for their conservation. Using a Bayesian coalescent-based method, we show that Madagascar fish-eagles have maintained a small effective population size for hundreds to thousands of years and that its low level of neutral genetic diversity is not the result of a recent bottleneck. Therefore, efforts made to prevent Madagascar fish-eagle extinction should place high priority on maintenance of habitat requirements and reducing direct and indirect human persecution. Given the current rate of deforestation in Madagascar, we further recommend that the population be expanded to occupy a larger geographical distribution. This will help the population persist when exposed to stochastic factors (e.g. climate and disease) that may threaten a species consisting of only 200 adult individuals while inhabiting a rapidly changing landscape.