Scanning electron microscopy of Treponema pallidum (Nichols strain) attached to cultured mammalian cells.

This paper describes the attachment of Treponema pallidum (Nichols strain) to cultured mammalian cells as a visualized by scanning electron microscopy. Treponemes were incubated for 3 hr with cultured cells derived from normal rabbit testes or human skin epithelium, then fixed, processed with critical-point drying, and examined with a Cambridge Mark 2A scanning electron microscope. Large numbers of treponemes became attached to the cultured cells without altering the morphological integrity of the cultured cells. Attachment appeared to involve a very close physical proximity of treponemes to the cultured cells; at the site of attachment, no changes such as swelling or indentation of the cultured cell surface were observed. The addition of ruthenium red to the fixatives produced a treponemal-associated surface precipitate. This material, which is probably mucopolysaccharide and/or phospholipid, may be important in protecting the organisms against host defense mechanisms; in addition, it may be involved in the serological unresponsiveness of freshly prepared suspensions of T. pallidum.     

Gap junction structures: Analysis of the x-ray diffraction data

Models for the spatial distribution of protein, lipid and water in gap junction structures have been constructed from the results of the analysis of X-ray diffraction data described here and the electron microscope and chemical data presented in the preceding paper (Caspar, D. L. D., D. A. Goodenough, L. Makowski, and W.C. Phillips. 1977. 74:605-628). The continuous intensity distribution on the meridian of the X-ray diffraction pattern was measured, and corrected for the effects of the partially ordered stacking and partial orientation of the junctions in the X-ray specimens. The electron density distribution in the direction perpendicular to the plane of the junction was calculated from the meridional intensity data. Determination of the interference function for the stacking of the junctions improved the accuracy of the electron density profile. The pair-correlation function, which provides information about the packing of junctions in the specimen, was calculated from the interference function. The intensities of the hexagonal lattice reflections on the equator of the X-ray pattern were used in coordination with the electron microscope data to calculate to the two-dimensional electron density projection onto the plane of the membrane. Differences in the structure of the connexons as seen in the meridional profile and equatorial projections were shown to be correlated to changes in lattice constant. The parts of the junction structure which are variable have been distinguished from the invariant parts by comparison of the X-ray data from different specimens. The combination of these results with electron microscope and chemical data provides low resolution three- dimensional representations of the structures of gap junctions.     

Strategies for the uses of lanthanide NMR shift probes in the determination of protein structure in solutio. Application to the EF calcium binding site of carp parvalbumin.

The homologous sequences observed for many calcium binding proteins such as parvalbumin, troponin C, the myosin light chains, and calmodulin has lead to the hypothesis that these proteins have homologous structures at the level of their calcium binding sites. This paper discusses the development of a nuclear magnetic resonance (NMR) technique which will enable us to test this structural hypothesis in solution. The technique involves the substitution of a paramagnetic lanthanide ion for the calcium ion which results in lanthanide induced shifts and broadening in the 1H NMR spectrum of the protein. These shifts are sensitive monitors of the precise geometrical orientation of each proton nucleus relative to the metal. The values of several parameters in the equation relating the NMR shifts to the structure are however known as priori. We have attempted to determine these parameters, the orientation and principal elements of the magnetic susceptibility tensor of the protein bound metal, by studying the lanthanide induced shifts for the protein parvalbumin whose structure has been determined by x-ray crystallographic techniques. The interaction of the lanthanide ytterbium with parvalbumin results in high resolution NMR spectra exhibiting a series of resonances with shifts spread over the range 32 to -19 ppm. The orientation and principal elements of the ytterbium magnetic susceptibility tensor have been determined using three assigned NMR resonances, the His-26 C2 and C4 protons and the amino terminal acetyl protons, and seven methyl groups; all with known geometry relative to the EF calcium binding site. The elucidation of these parameters has allowed us to compare the observed spectrum of the nuclei surrounding the EF calcium binding site of parvalbumin with that calculated from the x-ray structure. A significant number of the calculated shifts are larger than any of the observed shifts. We feel that a refinement of the x-ray based proton coordinates will be possible utilizing the geometric information contained in the lanthanide shifted NMR spectrum.     

Normal superoxide dismutase-1 (SOD-1) activity with deletion of chromosome band 21q21 supports localization of SOD-1 locus to 21q22

Summary The gene for superoxide dismutase-1 (SOD-1) is clearly on chromosome 21, although there is disagreement on the precise band location of SOD-1 on the long (q) arm of number 21. We report a patient with normal superoxide dismutase-1 (SOD-1) activity and an interstitial deletion of chromosome 21 resulting in monosomy for band q21. His phenotype is characterized by moderate mental retardation, a long narrow face, high and arched palate, cardiac murmur, undescended testes, and long hyperflexible extremities. The normal SOD-1 activity supports localization of this enzyme to 21q22.1.     

19F nuclear magnetic resonance studies of the coat protein of bacteriophage M13 in synthetic phospholipid vesicles and deoxycholate micelles.

The nonlytic, filamentous coliphage M13 offers an excellent model system for the study of membrane-protein interactions. We prepare derivatives of the protein containing fluorine-labeled amino acids and use 19F nuclear magnetic resonance (NMR) to study the protein in both deoxycholate micelles and phospholipid vesicles. We have previously described the in vivo preparation of an m-fluorotyrosyl derivative of M13 coat protein and also a method for incorporation of high levels of this protein into small, uniformly sized phospholipid vesicles of defined composition. Herein we describe the in vivo preparation and the characterization of an m-fluorophenylalanine derivative. We simultaneously compare the environment and mobility of the tyrosine and phenylalanine residues (the former in the hydrophobic region of the protein and the latter in the hydrophilic regions) as influenced by bile salt detergent or lipid interactions.     

In situ enzymatic removal of orthophosphate by the nucleoside phosphorylase catalyzed phosphorolysis of nicotinamide riboside

An enzymatic orthophosphate removal system is described which can be effectively used to continuously remove orthophosphate from biochemical samples. The phosphorolysis of nicotinamide riboside is catalyzed by calf spleen nucleoside phosphorylase to give ribose-1-PO4 and nicotinamide along with a proton. At pH 8 the production of ribose-1-PO4 from orthophosphate is essentially quantitative. This reaction can be monitored optically or by 31P nuclear magnetic resonance (NMR). Equations are given for determining the time required to remove a given amount of phosphate from a typical NMR sample with a known amount of nucleoside phosphorylase. The effects of a competing orthophosphate-producing reaction are considered.     

A remnant New Zealand carr

Carr vegetation was once extensive in New Zealand. It can be divided into Cordyline australis I Carex secta carr, comprising an open wood with scattered large herbs and an abundance of Carex species, and podocarp carr, dominated by tall conifers. Both have been almost eliminated by agricultural development. We studied a remnant of Cordyline australis I Carex secta carr in South Island, which graded at one end into salt marsh. Eight communities were recognized, including one pure salt marsh and two more with saline influence. Near the stream that provided moisture and alluvium for the area were herbaceous communities. In the poorly-drained area away from the stream were communities dominated by shrubs and small trees. The soil environment is similar to that of many European carrs, though generally less organic. A number of the exotic species are also found in European carrs.     

Vegetation of a coastal sand dune system in southern New Zealand

The introduction of vigorous exotic species has destroyed much of the native sand dune vegetation along the coasts of South Island, New Zealand. However, some dunes built by the native cyperad Desmoschoenus spiralis still remain in the southwest. The dunes at Cole Creek, on the West coast of South Island, were chosen as a relatively pristine study area. 15 transects were laid through semi-fixed dunes into dwarf forest. Environmental measurements were taken at regular intervals through the dunes: pH, soil moisture, organic matter, conductivity, nutrient status and elevation. Classification and ordination of these data demonstrated that two major environmental areas were present - open dune and dwarf forest - with an abrupt ecotone between them. Vegetation analyses revealed a loosely-banded pattern, parallel to the sea. Vegetation types with few but constant species such as Desmoschoenus spiralis and Calystegia soldanella, predominated in the open dune. Forest species were rarely found seaward of the dune/forest boundary, though there was evidence the Spatial Mass Effect was operating. Multiple regression and canonical correlation of the vegetation and environmental factors showed that the main factors affecting vegetation patterns were the environmental complex related to distance from the sea, elevation above mean tide, soil alkalinity and moisture.     

The inheritance of salt exclusion in woody perennial fruit species

Citrus and grapevines are salt-sensitive perennial crops. Damage caused by salinity is due mostly to accumulation of excessive concentrations of salt (Na- and Cl ions) in shoot tissues. In both crops, however, some rootstock varieties can restrict the accumulation of salt in scion leaves and stems. Salt-excluding rootstocks, however, are often deficient with regard to other desirable characteristics and as such their use is limited. As a consequence, we have conducted a range of crosses within both crops to select new salt-excluding hybrids which may have potential as new rootstocks and also to investigate the inheritance of salt exclusion in these woody perennials.In citrus, both Cl-ion and Na-ion exclusion has been observed as a continuous character and progenies segregate widely for their ability to restrict the accumulation of these ions in shoot tissues. The ability to exclude Cl ions appears to be independent of the ability to exclude Na ions. Thus a good Cl-ion excluder is not necessarily a good Na-ion excluder and vice versa. It has been possible, however, to select new salt-excluding citrus hybrids which perform as well as and sometimes better than parent varieties when grafted with a common scion and grown in artificially salinised field plots.In grapevines, the research has concentrated on the ability for Cl-ion exclusion and depending on the Cl-ion-excluding parent chosen this is inherited as either a polygenic or monogenic trait. In crosses between Vitis champini (Cl-ion excluder) and Vitis vinifera (Cl-ion accumulator), the ability to restrict Cl-ion accumulation in shoot tissues segregates widely with some offspring transgressing the performance of either parent. In crosses and backcrosses involving V. berlandieri and V. vinifera, however, hybrids segregate as either Cl-ion excluders or accumulators suggesting the effect of a major dominant gene for Cl-ion exclusion from V. berlandieri. This was evident from both field and glasshouse experiments although possible modifying genes from V. vinifera may affect the expression of this gene under glasshouse conditions in some crosses.