Detection of two loci involved in (1-->3)-beta-glucan (curdlan) biosynthesis by Agrobacterium sp. ATCC31749, and comparative sequence analysis of the putative curdlan synthase gene

Genes essential for the production of a linear, bacterial (1-->3)-beta- glucan, curdlan, have been cloned for the first time from Agrobacterium sp. ATCC31749. The genes occurred in two, nonoverlapping, genomic fragments that complemented different sets of curdlan( crd )-deficient transposon-insertion mutations. These were detected as colonies that failed to stain with aniline blue, a (1-->3)-beta-glucan specific dye. One fragment carried a biosynthetic gene cluster (locus I) containing the putative curdlan synthase gene, crdS, and at least two other crd genes. The second fragment may contain only a single crd gene (locus II). Determination of the DNA sequence adjacent to several locus I mutations revealed homology to known sequences only in the cases of crdS mutations. Complete sequencing of the 1623 bp crdS gene revealed highest similarities between the predicted CrdS protein (540 amino acids) and glycosyl transferases with repetitive action patterns. These include bacterial cellulose synthases (and their homologs), which form (1-->4)-beta-glucans. No similarity was detected with putative (1-->3)- beta-glucan synthases from yeasts and filamentous fungi. Whatever the determinants of the linkage specificity of these beta-glucan synthases might be, these results raise the possibility that (1-->3)-beta-glucans and (1-->4)-beta-glucans are formed by related catalytic polypeptides.      

低温胁迫下交替呼吸途径对当归幼苗叶绿素荧光活性的影响

以岷当归幼苗为材料,通过温室盆栽试验研究了在低温(4℃和-7℃)胁迫下交替呼吸途径对当归幼苗叶片叶绿素含量和荧光特性的影响,探讨交替呼吸途径在当归响应低温逆境过程中的作用。结果表明,随着胁迫温度的降低和处理时间的延长,当归叶片的叶绿素含量、实际光化学效率[Y(Ⅱ)]、光合电子传递速率(ETR)及光化学淬灭系数(qL)逐渐降低,而非光化学猝灭系数(NPQ)升高;同时,低温胁迫也导致当归幼苗叶片交替呼吸容量显著升高;在低温胁迫下,经交替呼吸途径抑制剂[1 mmol·L~(-1)的水杨基氧肟酸(SHAM)]预处理的当归幼苗叶片叶绿素含量、Y(Ⅱ)、ETR及qL进一步显著下降,而NPQ进一步显著升高,且温度越低升降幅度越大。研究发现,低温胁迫对当归幼苗叶片叶绿素的合成以及PSⅡ的光化学性能产生了显著抑制,低温胁迫下交替呼吸途径对当归幼苗叶绿素合成以及PSⅡ的光化学性能具有一定的保护作用。     

《中国植被志》的植被分类系统、植被类型划分及编排体系

植被志(vegegraphy)是基于植被调查资料, 全面记叙植被的群落外貌、种类组成、结构和功能、生境条件, 以及地理分布等特征, 并对同类植被进行归纳和总结的志书。“植被志”的英文译为“vegegraphy”, 是本文的新造词, 它是由“vegetation”的词头“vege-”和英文后缀“-graphy” (记叙之意)组成的合成词。《中国植被志》的研编是一项时间紧迫、内容复杂、工作量浩繁的重大科学工程。它的完成将极大提升中国植被科学和生态学的研究水平, 并为中国植被资源的合理利用、生物多样性保护及生态环境治理等提供不可或缺的基础资料。本文首先简述了植被的基本特征(主要包括外貌特征、种类组成、群落结构以及动态变化等)和国内外植被调查的进展情况, 简要回顾了中国植被分类系统的研究历史, 并对以往的分类系统进行了若干修订。在此基础上, 着重讨论并提出了《中国植被志》卷册编排体系和用于《中国植被志》研编的植被类型划分方案。在对植被分类系统的修订方面, 主要对高级分类单位及相对应的英文名称进行了讨论和修订。按照本文修订的分类系统, 中国植被的分类单位及其对应的英文名称分别是: 植被型组(Vegetation Formation Group)、植被型(Vegetation Formation)和植被亚型(Vegetation Subformation)、群系组(Alliance Group)、群系(Alliance)和亚群系(Suballiance)、群丛组(Association Group)以及群丛(Association)。在植被型组中, 划分为9类: 森林、灌丛、草本植被、荒漠、高山冻原与稀疏植被、沼泽与水生植被、农业植被、城市植被及无植被地段。关于《中国植被志》的卷册编排和“植被类型”划分, 首先按高级分类单位——植被型划分相应的“卷”; 在此框架下, 模糊“植被亚型”、“群系组”和“群系”的概念, 确定“植被类型” (Vegetation type), 并将其作为植被志各卷中的“册”。这样处理不仅保证了研编工作的可操作性, 也保持了同一卷册中特定植被类型的完整性。《中国植被志》编排体系中的“植被类型”的划分很重要, 它是指具有相同建群种及相同优势类群(如种、属)的植被组合, 但它不是严格意义上的植被分类单位。“植被类型”的划分遵循“优势类群及生活型的同一性, 生境条件的相对重要性, 植被特征及用途的差异性, 以及突出植被志的应用性”等原则。按该编排体系, 《中国植被志》将由48卷约110册组成。     

城市高架桥荫光照特性与绿化的合理布局

选取上海东西、南北走向高架桥各3段,分4个季度测定高架桥荫绿化带的光照分布状况及日变化动态,结合光合光子通量及植物光补偿点、需光度等指标,分析了高架桥荫光照的特殊性。结果表明,不同类型高架桥荫绿化带的光照分布及其日变化动态并不相同,同一高架桥荫光照也有明显差异,这主要与道路上方高架桥数量、高架桥高度、桥面与桥荫绿化带宽度差异以及天气情况有密切关系。高架桥荫绿化带光照分布的不均匀,使其存在植物生长的“死区”以及“强光伤害”区。因此,针对高架桥荫绿化带的光照分布特征进行合理布局是改善桥荫植物生长不良的有效途径。     

植物大年结实研究概述

大年结实指一个指物种群在不同年份同时产生具有很大变化的种子产量,这种生殖特征普遍存在于多年生植物中,是植物有性生殖过程中的一个重要进化对策。植物种子产量的周期性变化和种群内不同个体结实的同步程度是植物大年结实的两个重要特征。本文对大年结实的有关假说以及各自依据和缺陷进行了分析,讨论了植物种群内不同个体生殖同步性的程度和时间尺度的延续和空间尺度的异质性。     

Real-life quantitative G6PD screening in Plasmodium vivax patients in the Brazilian Amazon: A cost-effectiveness analysis

BackgroundAs quantitative glucose 6-phosphate dehydrogenase deficiency (G6PDd) screening tools are evaluated in operational studies, questions remain as to whether they are cost-effective. Here, a cost-effectiveness analysis (CEA) was performed to estimate the Incremental Cost-effectiveness Ratio (ICER) of the introduction of quantitative screening test to detect G6PDd among P. vivax carriers in two municipalities in the Brazilian Amazon.Methodology/Principal findingsThis cost-effectiveness analysis evaluated the use of the Standard G6PD quantitative screening test in vivax malaria treatment units in two municipalities of the Brazilian Amazon. Using the perspective of the Brazilian public health system, the analysis was performed for the outcome ‘PQ-associated hospitalization avoided’, based on a decision tree model. The results indicated that the G6PDd screening strategy compared with the routine strategy was highly cost-effective, with an ICER of US$495 per additional hospitalization avoided, which represented less than 8% of one Brazilian gross domestic product per capita (US$6,822). The uncertainties evaluated in the sensitivity analysis did not significantly affect the ICER identified in the base-case.Conclusions/SignificanceThis cost-effectiveness analysis showed the quantitative G6PD testing was effective in avoiding PQ-associated hospitalizations. The incorporation of G6PD screening is of paramount importance towards P. vivax malaria elimination in the Amazon to promote the safe use of primaquine and tafenoquine.     

Cytosolic thioredoxin reductase 1 is required for correct disulfide formation in the ER

Folding of proteins entering the secretory pathway in mammalian cells frequently requires the insertion of disulfide bonds. Disulfide insertion can result in covalent linkages found in the native structure as well as those that are not, so‐called non‐native disulfides. The pathways for disulfide formation are well characterized, but our understanding of how non‐native disulfides are reduced so that the correct or native disulfides can form is poor. Here, we use a novel assay to demonstrate that the reduction in non‐native disulfides requires NADPH as the ultimate electron donor, and a robust cytosolic thioredoxin system, driven by thioredoxin reductase 1 (TrxR1 or TXNRD1). Inhibition of this reductive pathway prevents the correct folding and secretion of proteins that are known to form non‐native disulfides during their folding. Hence, we have shown for the first time that mammalian cells have a pathway for transferring reducing equivalents from the cytosol to the ER, which is required to ensure correct disulfide formation in proteins entering the secretory pathway.     

西藏野生芥菜型油菜构件种群相互关系及其与气候因素的灰色关联度分析

以生物构件理论为基础,运用灰色关联分析技术对西藏野生芥菜型油菜种群构件结构与环境因子的关系进行了研究。结果表明:1)每株角果数、每角果粒数和粒重是产量构成的重要指标,随着每株角果数、每角果粒数和粒重的增大,西藏野生芥菜型油菜的产量明显增加,它们之间的构件因子关联度较大;2)主茎系统是西藏野生芥菜型油菜植株的基础,其间的关联性显示了西藏野生芥菜型油菜植株构件组成的整合作用;3)一级分枝长度、一级分枝角果数、二级分枝数、一级分枝粗度之间有较大的关联度,但与一级分枝发生高度关联度相对较小;4)研究的7个环境因子与西藏野生芥菜型油菜种群的生长关系均较密切,且温度是影响西藏野生芥菜型油菜分布和生命活动相对重要的环境因子,而降水为次要因子。     

Modeling expression quantitative trait loci in data combining ethnic populations

Background  

Combining data from different ethnic populations in a study can increase efficacy of methods designed to identify expression quantitative trait loci (eQTL) compared to analyzing each population independently. In such studies, however, the genetic diversity of minor allele frequencies among populations has rarely been taken into account. Due to the fact that allele frequency diversity and population-level expression differences are present in populations, a consensus regarding the optimal statistical approach for analysis of eQTL in data combining different populations remains inconclusive.