Climate and vegetation hierarchically structure patterns of songbird distribution in the Canadian boreal region

Environmental factors controlling the distribution and abundance of boreal avifauna are not fully understood, limiting our ability to predict the consequences of a changing climate and industrial development activities underway. We used a compilation of avian point‐count data, collected over 1990–2008 from nearly 36 000 locations, to model the abundance of individual forest songbird species within the Canadian boreal forest. We evaluated 30 vegetation and 101 climatic variables, representing most of the widely‐used dimensions of climate space, along with less usual measures of inter‐annual variability. Regression tree models allowed us to calculate the relative importance of climate and vegetation variable classes according to avian migration strategy without the need for a priori variable selection or dimension reduction. We tested for hierarchical habitat selection by formulating hypotheses on the locations of variables within the model tree structures. Climate variables explained the majority (77%) of deviance explained over 98 species modelled. As may be expected at high latitudes, we found energy availability (temperature, 65%) to be more important than moisture availability (precipitation, 12%). The contributions of inter‐ and intra‐annual climate variability (28%) were about half that of mean conditions. The relatively large contribution of remotely‐sensed vegetation metrics (23%) highlighted the importance of local vegetation heterogeneity controlled by non‐climatic factors. The two most important vegetation variables were landcover type and April leaf area index. When selected, these generally occurred in a model's right subtree, consistent with predictions from hierarchical habitat selection theory. When occupying the root node, landcover effectively delineated the historical forest‐prairie ecotone, reflecting the current disequilibrium between climate and vegetation due to human land use. Our findings suggest a large potential for avian distributional shifts in response to climate change, but also demonstrate the importance of finer scale vegetation heterogeneity in the spatial distribution of boreal birds.     

The influence of phosphorus availability and Laccaria bicolor symbiosis on phosphate acquisition,antioxidant enzyme activity,and rhizospheric carbon flux in Populus tremuloides

Many forest tree species are dependent on their symbiotic interaction with ectomycorrhizal (ECM) fungi for phosphorus (P) uptake from forest soils where P availability is often limited. The ECM fungal association benefits the host plant under P limitation through enhanced soil exploration and increased P acquisition by mycorrhizas. To study the P starvation response (PSR) and its modification by ECM fungi in Populus tremuloides, a comparison was made between nonmycorrhizal (NM) and mycorrhizal with Laccaria bicolor (Myc) seedlings grown under different concentrations of phosphate (Pi) in sand culture. Although differences in growth between NM and Myc plants were small, Myc plants were more effective at acquiring P from low Pi treatments, with significantly lower k _m values for root and leaf P accumulation. Pi limitation significantly increased the activity of catalase, ascorbate peroxidase, and guaiacol-dependent peroxidase in leaves and roots to greater extents in NM than Myc P. tremuloides. Phosphoenolpyruvate carboxylase activity also increased in NM plants under P limitation, but was unchanged in Myc plants. Formate, citrate, malonate, lactate, malate, and oxalate and total organic carbon exudation by roots was stimulated by P limitation to a greater extent in NM than Myc plants. Colonization by L. bicolor reduced the solution Pi concentration thresholds where PSR physiological changes occurred, indicating that enhanced Pi acquisition by P. tremuloides colonized by L. bicolor altered host P homeostasis and plant stress responses to P limitation. Understanding these plant–symbiont interactions facilitates the selection of more P-efficient forest trees and strategies for tree plantation production on marginal soils.     

Tracking Socioeconomic Vulnerability Using Network Analysis: Insights from an Avian Influenza Outbreak in an Ostrich Production Network

Background

The focus of management in many complex systems is shifting towards facilitation, adaptation, building resilience, and reducing vulnerability. Resilience management requires the development and application of general heuristics and methods for tracking changes in both resilience and vulnerability. We explored the emergence of vulnerability in the South African domestic ostrich industry, an animal production system which typically involves 3–4 movements of each bird during its lifetime. This system has experienced several disease outbreaks, and the aim of this study was to investigate whether these movements have contributed to the vulnerability of this system to large disease outbreaks.

Methodology/Principal Findings

The ostrich production system requires numerous movements of birds between different farm types associated with growth (i.e. Hatchery to juvenile rearing farm to adult rearing farm). We used 5 years of movement records between 2005 and 2011 prior to an outbreak of Highly Pathogenic Avian Influenza (H5N2). These data were analyzed using a network analysis in which the farms were represented as nodes and the movements of birds as links. We tested the hypothesis that increasing economic efficiency in the domestic ostrich industry in South Africa made the system more vulnerable to outbreak of Highly Pathogenic Avian Influenza (H5N2). Our results indicated that as time progressed, the network became increasingly vulnerable to pathogen outbreaks. The farms that became infected during the outbreak displayed network qualities, such as significantly higher connectivity and centrality, which predisposed them to be more vulnerable to disease outbreak.

Conclusions/Significance

Taken in the context of previous research, our results provide strong support for the application of network analysis to track vulnerability, while also providing useful practical implications for system monitoring and management.     

Overexpression of Pyruvate Dehydrogenase Kinase 1 and Lactate Dehydrogenase A in Nerve Cells Confers Resistance to Amyloid β and Other Toxins by Decreasing Mitochondrial Respiration and Reactive Oxygen Species Production

We previously demonstrated that nerve cell lines selected for resistance to amyloid β (Aβ) peptide exhibit elevated aerobic glycolysis in part due to increased expression of pyruvate dehydrogenase kinase 1 (PDK1) and lactate dehydrogenase A (LDHA). Here, we show that overexpression of either PDK1 or LDHA in a rat CNS cell line (B12) confers resistance to Aβ and other neurotoxins. Treatment of Aβ-sensitive cells with various toxins resulted in mitochondrial hyperpolarization, immediately followed by rapid depolarization and cell death, events accompanied by increased production of cellular reactive oxygen species (ROS). In contrast, cells expressing either PDK1 or LDHA maintained a lower mitochondrial membrane potential and decreased ROS production with or without exposure to toxins. Additionally, PDK1- and LDHA-overexpressing cells exhibited decreased oxygen consumption but maintained levels of ATP under both normal culture conditions and following Aβ treatment. Interestingly, immunoblot analysis of wild type mouse primary cortical neurons treated with Aβ or cortical tissue extracts from 12-month-old APPswe/PS1dE9 transgenic mice showed decreased expression of LDHA and PDK1 when compared with controls. Additionally, post-mortem brain extracts from patients with Alzheimer disease exhibited a decrease in PDK1 expression compared with nondemented patients. Collectively, these findings indicate that key Warburg effect enzymes play a central role in mediating neuronal resistance to Αβ or other neurotoxins by decreasing mitochondrial activity and subsequent ROS production. Maintenance of PDK1 or LDHA expression in certain regions of the brain may explain why some individuals tolerate high levels of Aβ deposition without developing Alzheimer disease.     

Stereopsis: where depth is seen

Disparity-selective cells appear to occur in all parts of the visual cortex, but a recent fMRI study finds that some cortical areas are more strongly associated with disparity than others. More sophisticated tests of binocular function may be needed to identify the properties of single neurons that support this specialization.     

Representation of binocular surfaces by cortical neurons

Useful representations of the three-dimensional (3D) world go beyond assigning depth to individual points, building maps of surfaces and shapes. Studies in a wide range of extrastriate cortical areas have shown that single neurons show selective responses to 3D surfaces. The extent to which this advances the representation beyond that provided by the earliest binocular signals requires careful evaluation. We conclude that current data are not sufficient to identify distinctive contributions from different cortical areas to the binocular representation of 3D surfaces.     

Prognosis in patients with recent onset low back pain in Australian primary care: inception cohort study

Objective To estimate the one year prognosis and identify prognostic factors in cases of recent onset low back pain managed in primary care.Design Cohort study with one year follow-up.Setting Primary care clinics in Sydney, Australia.Participants An inception cohort of 973 consecutive primary care patients (mean age 43.3, 54.8% men) with non-specific low back pain of less than two weeks’ duration recruited from the clinics of 170 general practitioners, physiotherapists, and chiropractors.Main outcome measures Participants completed a baseline questionnaire and were contacted six weeks, three months, and 12 months after the initial consultation. Recovery was assessed in terms of return to work, return to function, and resolution of pain. The association between potential prognostic factors and time to recovery was modelled with Cox regression.Results The follow-up rate over the 12 months was more than 97%. Half of those who reduced their work status at baseline had returned to previous work status within 14 days (95% confidence interval 11 to 17 days) and 83% had returned to previous work status by three months. Disability (median recovery time 31 days, 25 to 37 days) and pain (median 58 days, 52 to 63 days) took much longer to resolve. Only 72% of participants had completely recovered 12 months after the baseline consultation. Older age, compensation cases, higher pain intensity, longer duration of low back pain before consultation, more days of reduced activity because of lower back pain before consultation, feelings of depression, and a perceived risk of persistence were each associated with a longer time to recovery.Conclusions In this cohort of patients with acute low back pain in primary care, prognosis was not as favourable as claimed in clinical practice guidelines. Recovery was slow for most patients. Nearly a third of patients did not recover from the presenting episode within a year.     

Divergence and gene flow in the globally distributed blue‐winged ducks

The ability to disperse over long distances can result in a high propensity for colonizing new geographic regions, including uninhabited continents, and lead to lineage diversification via allopatric speciation. However, high vagility can also result in gene flow between otherwise allopatric populations, and in some cases, parapatric or divergence‐with‐gene‐flow models might be more applicable to widely distributed lineages. Here, we use five nuclear introns and the mitochondrial control region along with Bayesian models of isolation with migration to examine divergence, gene flow, and phylogenetic relationships within a cosmopolitan lineage comprising six species, the blue‐winged ducks (genus Anas), which inhabit all continents except Antarctica. We found two primary sub‐lineages, the globally‐distributed shoveler group and the New World blue‐winged/cinnamon teal group. The blue‐winged/cinnamon sub‐lineage is composed of sister taxa from North America and South America, and taxa with parapatric distributions are characterized by low to moderate levels of gene flow. In contrast, our data support strict allopatry for most comparisons within the shovelers. However, we found evidence of gene flow from the migratory, Holarctic northern shoveler A. clypeata and the more sedentary, African Cape shoveler A. smithii into the Australasian shoveler A. rhynchotis, although we could not reject strict allopatry. Given the diverse mechanisms of speciation within this complex, the shovelers and blue‐winged/cinnamon teals can serve as an effective model system for examining how the genome diverges under different evolutionary processes and how genetic variation is partitioned among highly dispersive taxa.     

Evolution, Ecology, and Multimodal Distributions of Body Size

The sizes of organisms are determined by their interactions with their environment and related ecological and evolutionary processes. Recent studies of body size distributions across communities show evidence for multimodality. The multiple modes were originally explained as a consequence of textural discontinuities in habitat structure. Because communities consist of species that are drawn from lineages, body size patterns within lineages will affect those that are expressed in communities. We used a cellular automation model to argue that multimodality in body sizes within lineages can arise from a few fundamental evolutionary mechanisms alone. We tested the hypothesis using body size data for 138 fish genera and found strong support for the idea that evolution structures body size distributions. The results suggest, first, that we should expect the distribution of body sizes within lineages to be multimodal and second, that a coherent theory of community body size distributions will need to combine both evolutionary and ecological perspectives. Received 28 January 2002; accepted 21 March 2002     

Variation in abundance and spatial distribution of ecomorphs of the sea urchins,Echinometra sp. nov A and E. sp. nov C on a Fijian reef

This paper presents novel spatial distribution and abundance patterns of ecomorphs of Echinometra sp. nov A andE. sp. nov C (hereafter referred to as E. sp. A and E. sp. C, and collectively as Echinometra spp.). Echinometraspp. were surveyed on the Nukubuco Reef, to determine the within-reef variations in size-frequency and density atseveral spatial scales [between positions (east versus west), zones (crest versus flat), sites and quadrats]. The scalesof variation were greatest for both species between positions and zones. Echinometra sp. A was more readily foundon the calmer flats while E. sp. C preferred the high-energy crests. The distribution of ecomorphs of Echinometraspp. varied between habitats (position x zone). Echinometra sp. A ecomorphs were more abundant on all locationsand showed different size-class distributions compared with E. sp. C. Greater urchin numbers were observed onboth zones of the eastern position than the western position. Echinometra sp. A showed marginal aggregationpattern while E. sp. C showed a stronger tendency to cluster.