冻融条件下生物结皮覆盖对土壤饱和导水率的影响

生物结皮(BSC)是广泛分布的地被物,每逢冬春季节,受冻融交替作用影响,结皮土壤的理化性质和水文学特征明显改变且与裸土差异显著,从而影响该地区土壤可蚀性评估和土壤侵蚀防治。采用室内模拟实验,以蓝藻结皮土壤为对象,研究不同冻融交替次数和初始含水量下,土壤三相对温度变化的响应特征并定量分析结皮覆盖土壤在此条件下饱和导水率(Ks)的变化趋势和突变点。结果表明:初始含水量对Ks无显著影响(P>0.05),冻融交替次数对Ks有极显著影响(P<0.01),冻融条件下裸土的平均Ks为1.941 mm/min,结皮覆盖土壤平均Ks为0.325 mm/min,两者具有极显著差异(P<0.01),且随交替次数增加,Ks差异逐渐增大,并在10次时达到最大值为10.13倍。不同冻融含水量下的结皮土壤的Ks在冻融10—20次时趋近,平均值为0.219mm/min。冻融作用显著改变土壤结构,且在冻融7次时土壤结构变化较明显,冻融过程中<0.1 mm的土壤颗粒显著变化。试验条件下,Ks受因子影响程度大小为:冻融交替次数>土壤结构>结皮厚度>结皮容重>下层土壤容重>...     

基于残差注意力网络模型的浮游植物识别

浮游植物作为水生态系统中最重要的生物组成部分之一,对水环境敏感,在水环境监测中得到了广泛的关注。然而水生环境复杂多样,准确高效地识别浮游植物是监测工作中的一大挑战。当前浮游植物识别方法可分为经典形态学分类、分子标记和人工智能图像识别三类。前两种方法已被广泛采用,但费时费力,不利于监测机构的大规模应用和推广。同样,利用图像进行自动化分类难以在高准确率与高效率上达到平衡。深度学习技术的发展为此提供了新思路。本文提出一种新的深度卷积神经网络RAN-11。该网络以残差注意力网络Attention-56和Attention-92为基础,凭借通道对齐融合主干上的底层特征与顶层特征,通过调整注意力模块和残差快个数以精简结构,并引入了Leaky ReLU激活函数代替ReLU。以太湖11个优势属共计1036张图像为数据来源进行对比验证。除星杆藻外,RAN-11对单一优势属的的查准率都在90%以上,并且有5个优势属达到100%的查准率。RAN-11的识别准确率为95.67%,推理速率为41.5帧/s,不仅比Attention-92（95.19%的准确率,23.6帧/s）更准确,而且比Attention-56（94.71%的准确率,41.2帧/s）更快,真正兼顾了准确率与效率。研究结果表明：（1）RAN-11在查准率、准确率和推理速率上优于原始残差注意力网络,更优于以词包模型为代表的传统图像识别方法;（2）融合多尺度特征、精简网络结构和优化激活函数是提高卷积神经网络性能的有力手段。建立在经典分类基础之上,本文提出新的残差注意力网络来提升浮游植物鉴定技术,并构建出浮游植物自动化识别系统,识别准确率高、易于推广,对于实现水体中浮游植物的自动化监测具有重要意义。     

DNA在鸟类分子系统发育研究中的应用

鸟类分子系统发育研究中常用的DNA技术有DNA杂交、RFLP和DNA序列分析等。DNA杂交技术曾在鸟类中有过大规模的应用,并由此诞生了一套新的鸟类分类系统。在鸟类的RFLP分析中,用的最多的靶序列是线粒体DNA。DNA序列分析技术被认为是进行分子系统发育研究最有效、最可靠的方法。在DNA序列分析中,线粒体基因应用最广泛,但由于其自身的一些不足,近年来,不少学者把目光投向了核基因,将线粒体基因和核基因结合起来进行系统发育研究。目前在鸟类分子系统发育中,应用较多的核基因是scnDNA,其内含子可以用于中等阶元水平的系统研究,而外显子主要用于高等阶元的系统研究。除了分子标记自身的问题之外,鸟类分子系统发育研究中还存在着方法上的问题,包括分子标记的选择,样本数量以及数据处理等。今后鸟类分子系统发育研究应该更加注重方法的标准化。     

High variability in the MHC class II DA beta chain of the brushtail possum (<Emphasis Type="Italic">Trichosurus vulpecula</Emphasis>)

The diversity of class II major histocompatibility complex (MHC) loci was investigated in the brushtail possum, an important marsupial pest species in New Zealand. Immunocontraception, a form of fertility control that generates an autoimmune response, is being developed as a population control method for the possum. Because the immune response is partly under genetic control, an understanding of immunogenetics in possum will be crucial to the development of immunocontraceptive vaccines. MHC molecules are critical in the vertebrate immune response. Class II MHC molecules bind and present exogenously derived peptides to T lymphocytes and may be important in the presentation of immunocontraceptives. We used polymerase chain reaction primers designed to amplify the peptide binding region of possum class II MHC genes to isolate sequences from 49 animals. We have previously described 19 novel alleles from the DAB locus in the possum (Holland et al., Immunogenetics 60:449–460, 2008). Here, we report on another 11 novel alleles isolated from possum DAB, making this the most diverse marsupial locus described so far. This high level of diversity indicates that DAB is an important MHC locus in the possum and will need to be taken into account in the design of immunocontraceptive vaccines.     

新革螨属1新种记述和2已知种若螨描述(蜱螨亚纲:中气门目:寄螨科)

记述新革螨属1新种：拟裂新革螨Neogamasus peribifiditectus sp．nov．。同时对异形新革螨Neogamasus anomalus Ma et Yan,1998和皱形新革螨Neogamasus crispus Ma et Yan,1998若螨进行描述。     

肺炎链球菌感染早期IFN-β通过调节巨噬细胞炎症反应保护宿主

该文旨在探讨干扰素-β(interferon-β,IFN-β)在肺炎链球菌(Streptococcus pneumoniae,S.pn)感染早期对宿主炎症免疫的影响.使用外源重组IFN-β蛋白(recombinant IFN-β,rIFN-β)预处理WT小鼠及其腹腔渗出巨噬细胞(peritoneal exudate m...     

裕固族血脂异常人群肠道菌群结构特征分析

探究生活在相同环境下的同一民族血脂异常人群与健康人群的肠道菌群差异,为血脂异常的精准预防和治疗提供参考。

收集甘肃肃南县裕固族血脂异常人群和健康人群粪便样本,提取细菌总DNA,通过16S rDNA高通量测序和生物信息学技术,分析2组人群肠道菌群的差异。

裕固族健康组人群肠道菌群分属26个门,73个纲,169个目,301个科,709个属,门水平上丰度＞1%的物种有4个,属水平上丰度＞1%的物种有22个。裕固族血脂异常组人群肠道菌群分属29个门,75个纲,280个目,304个科,702个属,门水平上丰度＞1%的物种有4个,属水平上丰度＞1%的物种有15个。裕固族血脂异常组人群肠道菌群与健康组间拟杆菌门、厚壁菌门、放线菌门水平以及F/B比值存在显著差异,Р＜0.05的差异物种有5个,Subdoligranulum、Christensenellaceae_R-7_group及Dialister与血脂水平呈负相关,Lachnoclostridium、Parasutterella与血脂水平呈正相关。

肃南县裕固族血脂异常组人群肠道菌群结构与健康组存在差异,为下一步关联分析肠道菌群与血脂异常及环境因素提供了基础数据。

     

Physicochemical and structural studies onAcinetobacter calcoaceticus RAG-1 and MR-481—Two standard strains in hydrophobicity tests

Acinetobacter calcoaceticus RAG-1 and MR-481, two standard strains used in microbial adhesion to hydrocarbons (MATH), were characterized by contact angles, pH-dependent zeta potentials, elemental surface composition by X-ray photoelectron spectroscopy (XPS), and molecular composition by infrared spectroscopy (IR). Negatively stained (methylamine tungstate) and ruthenium red-stained cells were studied by transmission electron microscopy to reveal the absence or presence of surface appendages. Despite the fact thatA. calcoaceticus RAG-1 is known to be extremely hydrophobic in MATH, whereas MR-481 is a completely non-hydrophobic mutant, neither XPS nor IR indicated a significant difference in chemical composition of the cell surfaces. Contact angles with polar liquids, water and formamide, were considerably higher on RAG-1 than on MR-481, in accordance with their relative hydrophobicities as measured by MATH. However, no significant differences in contact angles were observed between the two strains with apolar liquids like diiodomethane,-bromonaphthalene, and hexadecane. Fibrous extensions on RAG-1, observed after ruthenium red staining, were absent on the non-hydrophobic mutant MR-481. Tentatively, these extensions could be held responsible for the hydrophobicity ofA. calcoaceticus RAG-1.     

Effect of pollen competition and stigmatic receptivity on seed set in white clover (Trifolium repens L.)

The effect of competition between incompatible and compatible pollen grains on the seed production of white clover was studied. Stigmatic receptivity was also studied. A selection line of white clover that has red leaves was used as a pollen donor and as a genetic marker to allow determination of the pollen donor responsible for ovule fertilisation. Results show that incompatible pollen did not inhibit compatible pollen grains from fertilising ovules and producing seeds, although it did slightly impair seed yield. At temperatures of 20/10°C (day/night) stigmas of white clover remained receptive to additional pollination up to 32 h after an initial compatible pollination and 40 h after an incompatible pollination. The results imply that factors other than inadequate pollination and the self-incompatibility system are responsible for failure of white clover to attain its potential seed yield. Received: 31 August 1999 / Revision accepted: 28 February 2000