Fuzziness and Heterogeneity of Benthic Metacommunities in a Complex Transitional System

We propose an extension to the metacommunity (MC) concept and a novel operational methodology that has the potential to refine the analysis of MC structure at different hierarchical levels. We show that assemblages of species can also be seen as assemblages of abstract subregional habitat-related metacommunities (habMCs). This intrinsically fuzzy concept recognizes the existence of habMCs that are typically associated with given habitats, while allowing for the mixing and superposition of different habMCs in all sites and for boundaries among subregions that are neither spatially sharp nor temporally constant. The combination of fuzzy clustering and direct gradient analysis permits us to 1) objectively identify the number of habMCs that are present in a region as well as their spatial distributions and relative weights at different sites; 2) associate different subregions with different biological communities; and 3) quantitatively assess the affinities between habMCs and physical, morphological, biogeochemical, and environmental properties, thereby enabling an analysis of the roles and relative importance of various environmental parameters in shaping the spatial structure of a metacommunity. This concept and methodology offer the possibility of integrating the continuum and community unit concepts and of developing the concept of a habMC ecological niche. This approach also facilitates the practical application of the MC concept, which are not currently in common use. Applying these methods to macrophytobenthic and macrozoobenthic hard-substrate assemblages in the Venetian Lagoon, we identified a hierarchical organization of macrobenthic communities that associated different habMCs with different habitats. Our results demonstrate that different reference terms should be applied to different subregions to assess the ecological status of a waterbody and show that a combination of several environmental parameters describes the spatial heterogeneity of benthic communities much better than any single property can. Our results also emphasize the importance of considering heterogeneity and fuzziness when working in natural systems.     

Integrated archaeobotanical research into vegetation management and land use in El Llano de la Horca (Santorcaz, Madrid, central Spain)

This paper presents an integrated archaeobotanical analysis carried out at the site known as “El Llano de la Horca”, a Bronze and Late Iron Age (3rd–1st century b.c.) Carpetanian settlement in central Spain (3600?±?80 b.p.). Pollen and spore analysis indicates an open landscape dominated by the herb taxa Asteraceae, Chenopodiaceae and Poaceae with an important representation of Glomus. The combination of pollen and charcoal studies also reveals the presence of Pinus sylvestris-nigra, P. pinaster-pinea, Juniperus thurifera, Quercus faginea, Q. ilex and Q. suber as the main trees used. Occurrences of Alnus, Corylus, Fraxinus and Juglans suggest the existence of water courses nearby. The archaeobotanical data is correlated with the geographical setting and archaeological context. The evolution of settlement patterns in central Spain, as well as the economy of other Carpetanian sites, is also considered to evaluate how this territory was managed for its vegetational resources since the Bronze Age (BA). Changes are expected as a consequence of different socio-economic factors at this site, especially when the settlement became an important Carpetanian oppidum. The combined results demonstrate a subsistence system based on cereal agriculture, in which naked wheat was dominant, together with some hulled barley and some erratic occurrences of hulled wheat. Furthermore, livestock breeding and metalwork activities seem to have resulted in a significant loss of woodland in order to clear land for crop fields and cattle grazing to cope with the needs of the growing Carpetanian community.     

Investigation of the synthetic route to pepstatin analogues by SPPS using O‐protected and O‐unprotected statine as building blocks

The synthetic route to pepstatin derivatives by a solid phase peptide synthesis using either O‐protected or O‐unprotected statine as a building block has been investigated. Statine was prepared according to a modified literature procedure, whereas protection of its 3‐hydroxyl moiety using tert‐butyldimethylsilylchloride (TBSCl) provided the novel O‐TBS‐protected statine building block. The O‐tert‐butyldimethylsilyl (TBS)‐protected statine approach provides an improved synthetic strategy for the preparation of statine‐containing peptides as demonstrated by the synthesis of the pepstatin analogue iva‐Val‐Leu‐Sta‐Ala‐Sta. Copyright © 2009 European Peptide Society and John Wiley & Sons, Ltd.     

Ester derivatives of annulated tetrahydroazocines: a new class of selective acetylcholinesterase inhibitors

A series of ester derivatives of annulated tetrahydroazocines, namely 2,3,6,11-tetrahydro-1H-azocino[4,5-b]indoles (5-10), 2,3,6,7-tetrahydro-1H-azocino[5,4-b]indoles (11-14), and 4,7,8,9-tetrahydro-1H-pyrrolo[2,3-d]azocines (15-18), synthesized through an efficient 6-->8 membered ring expansion procedure, were investigated for their acetylcholinesterase (AChE) inhibitory activities. Most of the compounds acted as AChE inhibitors in vitro, with IC(50) values ranging from 5 to 40 microM. The most potent compounds 11 and 15, both as racemic mixtures, proved selective toward AChE, exhibiting selectivity ratios versus butyrylcholinesterase (BuChE) of ca. 15 and more than 20, respectively. Structure-activity studies highlighted, among other factors, lipophilicity as a property modulating the AChE inhibition potency, as shown by a reasonable parabolic correlation between pIC(50) and experimental 1-octanol/water partition coefficient (logP), which described the prevailing behavior of the examined compounds (r(2)=0.665). Molecular docking simulations using the X-ray crystal structure of AChE from Torpedo californica suggested possible binding modes of the tetrahydroazocine ester derivatives 11 and 15.     

<Emphasis Type="Italic">Taxus baccata</Emphasis> in the Azores: a relict form at risk of imminent extinction

Taxus baccata L., a Tertiary relict formerly widespread in the Azores Archipelago, was recently classified as “probably extinct”. This paper documents the persistence of the species in the Azores and provides its first characterization by means of morphometric and genetic analyses. Only five individuals were found, growing on Pico Island. Although the population size is critically small it retains some highly significant characteristics for the assessment of the genetic diversity of the species and its phylogeography. The leaves of the Azorean provenance were smaller than those of all other Taxus baccata described in literature; moreover, they have a higher stomata density and more numerous stomata rows. These features are all “primitive”, according to suggested morphological evolutionary trends. We assume that sequence analysis of the chloroplast trnS–trnQ intergenic spacer demonstrates that the Azorean population represents a different evolutionary line within Taxus. This suggests a more direct derivation from ancestors than provenances from Mediterranean and European regions. These individuals may be the last survivors of an ancient lineage, preserved in the Azores as part of the Macaronesian flora. Immediate conservation action focusing on site protection and ex situ reproduction strategies is recommended to save this lineage from imminent extinction.     

Mesenchymal stem cells from development to postnatal joint homeostasis, aging, and disease

Joint morphogenesis involves signaling pathways and growth factors that recur in the adult life with less redundancy to safeguard joint homeostasis. Loss of such homeostasis due to abnormal signaling networks as in aging could lead to diseases such as osteoarthritis. Stem cells are the cellular counterpart and targets of the morphogenetic signals, and they function to maintain the tissues by ensuring replacement of cells lost to physiological turnover, injury, aging, and disease. Mesenchymal stem cells (MSCs) are key players in regenerative medicine for their ability to differentiate toward multiple lineages such as cartilage and bone, but they age along the host body and senesce when serially passaged in culture. Understanding correlations between aging and its effects on MSCs is of the utmost importance to explain how aging happens and unravel the underlying mechanisms. The investigation of the MSC senescence in culture will help in developing more efficient and standardized cell culture methods for cellular therapies in skeletal regenerative medicine. An important area to explore in biomedical sciences is the role of endogenous stem cell niches in joint homeostasis, remodeling, and disease. It is anticipated that an understanding of the stem cell niches and related remodeling signals will allow the development of pharmacological interventions to support effective joint tissue regeneration, to restore joint homeostasis, and to prevent osteoarthritis.     

Prophenoloxidase activation is not required for survival to microbial infections in Drosophila

The antimicrobial defence of Drosophila relies on cellular and humoral processes, of which the inducible synthesis of antimicrobial peptides has attracted interest in recent years. Another potential line of defence is the activation, by a proteolytic cascade, of phenoloxidase, which leads to the production of quinones and melanin. However, in spite of several publications on this subject, the contribution of phenoloxidase activation to resistance to infections has not been established under appropriate in vivo conditions. Here, we have isolated the first Drosophila mutant for a prophenoloxidase-activating enzyme (PAE1). In contrast to wild-type flies, PAE1 mutants fail to activate phenoloxidase in the haemolymph following microbial challenge. Surprisingly, we find that these mutants are as resistant to infections as wild-type flies, in the total absence of circulating phenoloxidase activity. This raises the question with regard to the precise function of phenoloxidase activation in defence, if any.