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41.
Robin E. Everts Serge A. Versteeg Corinne Renier Francoise Vignaux Peter C. Groot Jan Rothuizen Bernard A. van Oost 《Mammalian genome》2000,11(9):741-747
Genomic Representational Difference Analysis (gRDA) is a subtractive DNA method to clone the differences between two related
genomes, called tester and driver. We have evaluated this method to obtain polymorphic DNA markers for pedigree dogs. Amplified
size-selected genomic restriction fragments (amplicons) of two dog littermates were repeatedly hybridized to each other in
order to remove (subtract) those restriction fragments common to both sibs. Already after two rounds of subtractive hybridization,
a clear enrichment of presumably tester-specific restriction fragments was observed, which was even more pronounced after
the third round of subtraction. A plasmid library of 3000 recombinant clones was constructed of the second round and of the
third round difference product. DNA sequence determination of randomly chosen clones of each difference product showed that
approximately 1000 unique clones were obtained in the second-round difference product and approximately 500 in the third-round
difference product. About half of the clones identified in the second-round difference product were also present in the third-round
difference product. Of the second-round difference product, 39 different gRDA fragments could be identified, of which 21 were
tester specific. In the third-round difference product, 22 different gRDA fragments were identified, of which 18 were tester
specific. There were 13 fragments in common, resulting in a total of 48 different fragments. In order to establish the localization
of these markers, we performed mapping using the dog radiation hybrid panel RHDF5000. Of 39 mapped clones, 29 were mapped
to 20 existing RH groups, and 10 remained unlinked. It is concluded that gRDA is suitable to generate DNA markers to track
disease genes within lines of pedigree dogs.
Received: 26 April 2000 / Accepted: 11 May 2000 相似文献
42.
Fox EM Bernaciak TM Wen J Weaver AM Shupnik MA Silva CM 《Molecular endocrinology (Baltimore, Md.)》2008,22(8):1781-1796
43.
Janko K Marshall C Musilová Z Van Houdt J Couloux A Cruaud C Lecointre G 《Molecular phylogenetics and evolution》2011,60(3):305-316
Clades that have undergone episodes of rapid cladogenesis are challenging from a phylogenetic point of view. They are generally characterised by short or missing internal branches in phylogenetic trees and by conflicting topologies among individual gene trees. This may be the case of the subfamily Trematominae, a group of marine teleosts of coastal Antarctic waters, which is considered to have passed through a period of rapid diversification. Despite much phylogenetic attention, the relationships among Trematominae species remain unclear. In contrast to previous studies that were mostly based on concatenated datasets of mitochondrial and/or single nuclear loci, we applied various single-locus and multilocus phylogenetic approaches to sequences from 11 loci (eight nuclear) and we also used several methods to assess the hypothesis of a radiation event in Trematominae evolution. Diversification rate analyses support the hypothesis of a period of rapid diversification during Trematominae history and only a few nodes in the hypothetical species tree were consistently resolved with various phylogenetic methods. We detected significant discrepancies among trees from individual genes of these species, most probably resulting from incomplete lineage sorting, suggesting that concatenation of loci is not the most appropriate way to investigate Trematominae species interrelationships. These data also provide information about the possible effects of historic climate changes on the diversification rate of this group of fish. 相似文献
44.
The structural and electrochemical consequences of hydrogenating copper N2S2 Schiff base macrocycles
Katherine D. Trotter John C. Forgie Leonard E.A. Berlouis Corinne M. Spickett 《Inorganica chimica acta》2010,363(7):1529-2594
A series of cis and trans tetradentate copper macrocyclic complexes, of ring size 14-16, that employ amine and thioether donor groups are reported. Apart from 5,6,15,16-bisbenzo-8,13-diaza-1,4-dithia-cyclohexadecane copper(I) (cis-[Cu(H4NbuSen)]+) all of the complexes are obtained in the copper(II) form. Crystallographic analysis shows that the copper(II) complexes all adopt a distorted planar geometry around the copper. In contrast, cis-[Cu(H4NbuSen)]+ is found to adopt a distorted tetrahedral geometry. The complexes were subjected to electrochemical analysis in water and acetonitrile. The effect of the solvent, positions of the donor atoms (cis/trans) on E1/2 is discussed as is the comparison of the electrochemical behaviour of these complexes with their parent Schiff base macrocycles. 相似文献
45.
Over time, organisms developed various strategies to adapt to their environment. Circadian clocks are thought to have evolved to adjust to the predictable rhythms of the light-dark cycle caused by the rotation of the Earth around its own axis. The rhythms these clocks generate persist even in the absence of environmental cues with a period of about 24 hours. To tick in time, they continuously synchronize themselves to the prevailing photoperiod by appropriate phase shifts. In this study, we disrupted two molecular components of the mammalian circadian oscillator, Rev-Erbα and Period1 (Per1). We found that mice lacking these genes displayed robust circadian rhythms with significantly shorter periods under constant darkness conditions. Strikingly, they showed high amplitude resetting in response to a brief light pulse at the end of their subjective night phase, which is rare in mammals. Surprisingly, Cry1, a clock component not inducible by light in mammals, became slightly inducible in these mice. Taken together, Rev-Erbα and Per1 may be part of a mechanism preventing drastic phase shifts in mammals. 相似文献
46.
Claudia R. Oliva Susan E. Nozell Anne Diers Samuel G. McClugage III Jann N. Sarkaria James M. Markert Victor M. Darley-Usmar Shannon M. Bailey G. Yancey Gillespie Aimee Landar Corinne E. Griguer 《The Journal of biological chemistry》2010,285(51):39759-39767
Temozolomide (TMZ) is an oral alkylating agent used for the treatment of high-grade gliomas. Acquired chemoresistance is a severe limitation to this therapy with more than 90% of recurrent gliomas showing no response to a second cycle of chemotherapy. Efforts to better understand the underlying mechanisms of acquired chemoresistance to TMZ and potential strategies to overcome chemoresistance are, therefore, critically needed. TMZ methylates nuclear DNA and induces cell death; however, the impact on mitochondria DNA (mtDNA) and mitochondrial bioenergetics is not known. Herein, we tested the hypothesis that TMZ-mediated alterations in mtDNA and respiratory function contribute to TMZ-dependent acquired chemoresistance. Using an in vitro model of TMZ-mediated acquired chemoresistance, we report 1) a decrease in mtDNA copy number and the presence of large heteroplasmic mtDNA deletions in TMZ-resistant glioma cells, 2) remodeling of the entire electron transport chain with significant decreases of complexes I and V and increases of complexes II/III and IV, and 3) pharmacologic and genetic manipulation of cytochrome c oxidase, which restores sensitivity to TMZ-dependent apoptosis in resistant glioma cells. Importantly, human primary and recurrent pairs of glioblastoma multiforme (GBM) biopsies as well as primary and TMZ-resistant GBM xenograft lines exhibit similar remodeling of the ETC. Overall these results suggest that TMZ-dependent acquired chemoresistance may be due to a mitochondrial adaptive response to TMZ genotoxic stress with a major contribution from cytochrome c oxidase. Thus, abrogation of this adaptive response may reverse chemoresistance and restore sensitivity to TMZ, providing a strategy for improved therapeutic outcomes in GBM patients. 相似文献
47.
Quantification of facial skeletal shape variation in fibroblast growth factor receptor‐related craniosynostosis syndromes 下载免费PDF全文
48.
49.
Foxl2 gene and the development of the ovary: a story about goat, mouse, fish and woman 总被引:2,自引:0,他引:2
Baron D Batista F Chaffaux S Cocquet J Cotinot C Cribiu E De Baere E De Baeree E Guiguen Y Jaubert F Pailhoux E Pannetier M Vaiman D Vigier B Veitia R Fellous M 《Reproduction, nutrition, development》2005,45(3):377-382
In this review, we describe recent results concerning the genetics of sex determination in mammals. Particularly, we developed the study of the FOXL2 gene and its implication in genetic anomalies in goats (PIS mutation) and humans (BPES). We present the expression of FOXL2 in the ovaries of different species. 相似文献
50.