Use of a Ring Chromosome and Pulsed-Field Gels to Study Interhomolog Recombination, Double-Strand DNA Breaks and Sister-Chromatid Exchange in Yeast

We describe a system that uses pulsed-field gels for the physical detection of recombinant DNA molecules, double-strand DNA breaks (DSB) and sister-chromatid exchange in the yeast Saccharomyces cerevisiae. The system makes use of a circular variant of chromosome III (Chr. III). Meiotic recombination between this ring chromosome and a linear homolog produces new molecules of sizes distinguishable on gels from either parental molecule. We demonstrate that these recombinant molecules are not present either in strains with two linear Chr. III molecules or in rad50 mutants, which are defective in meiotic recombination. In conjunction with the molecular endpoints, we present data on the timing of commitment to meiotic recombination scored genetically. We have used x-rays to linearize circular Chr. III, both to develop a sensitive method for measuring frequency of DSB and as a means of detecting double-sized circles originating in part from sister-chromatid exchange, which we find to be frequent during meiosis.     

Peptide thioesters and 4-nitroanilides as substrates for porcine pancreatic kallikrein

A series of 14 4-nitroanilide substrates and 17 thioester substrates have been used to measure kinetic constants with porcine pancreatic kallikrein. All of the substrates have a P1 arginine residue. The 4-nitroanilide substrates consist of seven P2-glycine and seven P2-phenylalanine tripeptides. As expected from previous results, the phenylalanine series substrates were generally 100-fold 'better' than those in the glycine series. The S3 subsite was found to 'prefer' lysine or phenylalanine, whereas glutamic acid in this position was distinctly unfavourable. The thioester substrates consisted of various thioester derivatives of arginine as well as 12 dipeptides. These substrates exhibited kcat./Km values generally 1000 times higher than the P2-phenylalanine 4-nitroanilides. With the thioesters, a P2 phenylalanine or tryptophan residue yielded the best substrates, but some of the simple derivatives of arginine were nearly as good. A comparison of the kinetic constants of the thioester substrates between the porcine enzyme and human plasma kallikrein provides further evidence that these enzymes have a similar preference for bulky P2 residues, but otherwise are quite different enzymes. The thioester substrates are nearly as reactive as oxygen ester substrates such as acetylphenylalanylarginine methyl ester for the porcine enzyme [Levison & Tomalin (1982) Biochem. J. 203, 299-302; Fiedler (1983) Adv. Exp. Med. Biol. 156A, 263-274], and owing to the greater ease in assaying with the thioesters, they should find use in routine assays for the glandular kallikreins.     

The transmission of information in natural systems

An isomorphism of information storage and transmission in natural systems is presented. First, a structural and functional dichotomy found in the control centres of the predominant systems in the physical, biological and psychological realms is outlined. The dichotomy of control is shown to allow for an intrinsic balance between the preservation of a system's information, on the one hand, and its alteration and usage, on the other. It is then shown that the mechanisms of communication between the control centre elements are isomorphic among these diverse systems. That is, the transmission of information from one control element to another entails its "double-inversion", which allows for the retrieval of the information in its original form by means of a second transfer process. This mechanism of information transmission leads to novel conclusions concerning the nature of the "brain code".     

Hagiographic narrative and monastic practice: Buddhist morality and mastery amongst Thai Buddhist nuns

Drawing on ethnographic analysis of the life-story of a contemporary Thai Buddhist nun ( mae chee ), this article argues that narrative convention must be understood as constitutive as well as communicative. In hagiographic convention and ascetic discipline gender distinctions are not understood as relevant for spiritual attainment. The use of hagiography by male and female religious professionals located in a gendered hierarchy suggests that religious practice may not be sufficiently accounted for through an analytical framework of domination and subordination. Rather, power is more usefully located within the relations and practices that form the conditions of the subject.  

Résumé

En procédant à l'analyse ethnographique de l'histoire de la vie d'une nonne bouddhiste ( mae chee ) thaïe, l'auteur avance que la convention narrative doit être appréhendée comme constitutive aussi bien que communicative. Dans la convention hagiographique et la discipline ascétique, les distinctions entre les sexes ne sont pas considérées comme pertinentes pour atteindre l'illumination. L'usage de l'hagiographie par les religieux, hommes et femmes, placés dans le cadre d'une hiérarchie sexuée, suggère que le cadre analytique de domination et de subordination est peut-être insuffisant pour appréhender la pratique religieuse, et qu'il serait plus utile de situer le pouvoir dans les relations et pratiques qui conditionnent le sujet.     

Frequency of alleles conferring resistance to Bacillus thuringiensis maize in Louisiana populations of the southwestern corn borer

Transgenic maize [Zea mays L. (Poaceae)] expressing Bacillus thuringiensis proteins (Bt maize) has become the most important tool for managing stalk borers in maize in the USA. The current strategy for delaying the evolution of resistance in target insects for Bt maize is referred to as high dose/refuge strategy. A key requirement of the strategy is that initial resistance allele frequencies in field insect populations are low (e.g., <0.001). More than 200 iso‐line families of the southwestern corn borer, Diatraea grandiosella Dyar (Lepidoptera: Crambidae), a major target stalk borer pest of Bt maize, were developed from Louisiana populations and evaluated for Bt resistance using a modified F₂ screening method during 2005. No major resistance alleles were detected in these populations. The results showed that the expected Bt resistance allele frequency in the Louisiana populations was <0.0035 with 95% probability and a detection power of 83.9 ± 0.6%. The F₂ screen indicates that Bt resistance allele frequencies in D. grandiosella are low among the Louisiana populations and should meet the rare resistance allele requirement of the ‘high dose/refuge’ strategy.     

Biogeography of the Australian monsoon tropics

Aim This paper reviews the biogeography of the Australian monsoon tropical biome to highlight general patterns in the distribution of a range of organisms and their environmental correlates and evolutionary history, as well as to identify knowledge gaps. Location Northern Australia, Australian Monsoon Tropics (AMT). The AMT is defined by areas that receive more than 85% of rainfall between November and April. Methods Literature is summarized, including the origin of the monsoon climate, present‐day environment, biota and habitat types, and phylogenetic and geographical relationships of selected organisms. Results Some species are widespread throughout the AMT while others are narrow‐range endemics. Such contrasting distributions correspond to present‐day climates, hydrologies (particularly floodplains), geological features (such as sandstone plateaux), fire regimes, and vegetation types (ranging from rain forest to savanna). Biogeographical and phylogenetic studies of terrestrial plants (e.g. eucalypts) and animals (vertebrates and invertebrates) suggest that distinct bioregions within the AMT reflect the aggregated effects of landscape and environmental history, although more research is required to determine and refine the boundaries of biogeographical zones within the AMT. Phylogenetic analyses of aquatic organisms (fishes and prawns) suggest histories of associations with drainage systems, dispersal barriers, links to New Guinea, and the existence of Lake Carpentaria, now submerged by the Gulf of Carpentaria. Complex adaptations to the landscape and climate in the AMT are illustrated by a number of species. Main conclusions The Australian monsoon is a component of a single global climate system, characterized by a dominant equator‐spanning Hadley cell. Evidence of hot, seasonally moist climates dates back to the Late Eocene, implying that certain endemic elements of the AMT biota have a long history. Vicariant differentiation is inferred to have separated the Kimberley and Arnhem Land bioregions from Cape York Peninsula/northern Queensland. Such older patterns are overlaid by younger events, including dispersal from Southeast Asia, and range expansions and contractions. Future palaeoecological and phylogenetic investigations will illuminate the evolution of the AMT biome. Understanding the biogeography of the AMT is essential to provide a framework for ecological studies and the sustainable development of the region.